RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 SLC38A11Q08AI6 406 aa18.47■□□□□ 0.55
TSEN54-209ENST00000583454 ODF3L2Q3SX64 289 aa18.47■□□□□ 0.55
TSEN54-209ENST00000583454 GBGT1Q8N5D6 347 aa18.47■□□□□ 0.55
TSEN54-209ENST00000583454 BPIFCQ8NFQ6 507 aa18.47■□□□□ 0.55
TSEN54-209ENST00000583454 MS4A6AQ9H2W1 248 aa18.47■□□□□ 0.55
TSEN54-209ENST00000583454 E5RGE8 158 aa18.46■□□□□ 0.55
TSEN54-209ENST00000583454 GATA2P23769 480 aaPredicted RBP18.46■□□□□ 0.55
TSEN54-209ENST00000583454 TEPPQ6URK8 271 aa18.46■□□□□ 0.55
TSEN54-209ENST00000583454 CYP2G1PQ6ZSU1 146 aa18.46■□□□□ 0.55
TSEN54-209ENST00000583454 STPG3Q8N7X2 389 aa18.46■□□□□ 0.55
TSEN54-209ENST00000583454 PPP1R1CQ8WVI7 109 aa18.46■□□□□ 0.55
TSEN54-209ENST00000583454 SRD5A3Q9H8P0 318 aa18.46■□□□□ 0.55
TSEN54-209ENST00000583454 PFDN2Q9UHV9 154 aa18.46■□□□□ 0.55
TSEN54-209ENST00000583454 ALMS1Q8TCU4 4167 aa18.46■□□□□ 0.55
TSEN54-209ENST00000583454 HELTA6NFD8 242 aa18.45■□□□□ 0.54
TSEN54-209ENST00000583454 NUP62P37198 522 aaPredicted RBP18.45■□□□□ 0.54
TSEN54-209ENST00000583454 TFPI2P48307 235 aa18.45■□□□□ 0.54
TSEN54-209ENST00000583454 SELENOTP62341 195 aa18.45■□□□□ 0.54
TSEN54-209ENST00000583454 RPL11P62913 178 aaKnown RBP18.45■□□□□ 0.54
TSEN54-209ENST00000583454 RETNQ9HD89 108 aa18.45■□□□□ 0.54
TSEN54-209ENST00000583454 OR5AC2Q9NZP5 309 aa18.45■□□□□ 0.54
TSEN54-209ENST00000583454 RBMY1BA6NDE4 496 aaKnown RBP18.44■□□□□ 0.54
TSEN54-209ENST00000583454 RBMY1EA6NEQ0 496 aaKnown RBP18.44■□□□□ 0.54
TSEN54-209ENST00000583454 RBMY1DP0C7P1 496 aaKnown RBP18.44■□□□□ 0.54
TSEN54-209ENST00000583454 S100A11P31949 105 aa18.44■□□□□ 0.54
TSEN54-209ENST00000583454 CMC4P56277 68 aaPredicted RBP18.44■□□□□ 0.54
TSEN54-209ENST00000583454 OXA1LQ15070 435 aa18.44■□□□□ 0.54
TSEN54-209ENST00000583454 LRRC37A5PQ49AS3 106 aa18.44■□□□□ 0.54
TSEN54-209ENST00000583454 STX12Q86Y82 276 aa18.44■□□□□ 0.54
TSEN54-209ENST00000583454 TMEM217Q8N7C4 229 aa18.44■□□□□ 0.54
TSEN54-209ENST00000583454 RNF126Q9BV68 326 aa18.44■□□□□ 0.54
TSEN54-209ENST00000583454 SLC45A2Q9UMX9 530 aa18.44■□□□□ 0.54
TSEN54-209ENST00000583454 DNASE2O00115 360 aaPredicted RBP18.43■□□□□ 0.54
TSEN54-209ENST00000583454 MPC2O95563 127 aa18.43■□□□□ 0.54
TSEN54-209ENST00000583454 CXCL3P19876 107 aa18.43■□□□□ 0.54
TSEN54-209ENST00000583454 AP2S1P53680 142 aaPredicted RBP18.43■□□□□ 0.54
TSEN54-209ENST00000583454 VWC2Q2TAL6 325 aa18.43■□□□□ 0.54
TSEN54-209ENST00000583454 UBQLN2Q9UHD9 624 aa18.43■□□□□ 0.54
TSEN54-209ENST00000583454 HBG1P69891 147 aa18.42■□□□□ 0.54
TSEN54-209ENST00000583454 HBG2P69892 147 aa18.42■□□□□ 0.54
TSEN54-209ENST00000583454 C1orf194Q5T5A4 169 aa18.42■□□□□ 0.54
TSEN54-209ENST00000583454 WFDC3Q8IUB2 231 aa18.42■□□□□ 0.54
TSEN54-209ENST00000583454 K7EQG2 157 aa18.41■□□□□ 0.54
TSEN54-209ENST00000583454 PLP1P60201 277 aa18.41■□□□□ 0.54
TSEN54-209ENST00000583454 STXBP6Q8NFX7 210 aa18.41■□□□□ 0.54
TSEN54-209ENST00000583454 DCANP1Q8TF63 244 aa18.41■□□□□ 0.54
TSEN54-209ENST00000583454 SLC25A31Q9H0C2 315 aa18.41■□□□□ 0.54
TSEN54-209ENST00000583454 MED28Q9H204 178 aa18.41■□□□□ 0.54
TSEN54-209ENST00000583454 UQCC1Q9NVA1 299 aa18.41■□□□□ 0.54
TSEN54-209ENST00000583454 ORM2P19652 201 aa18.4■□□□□ 0.54
TSEN54-209ENST00000583454 NHLH2Q02577 135 aa18.4■□□□□ 0.54
TSEN54-209ENST00000583454 FCN2Q15485 313 aa18.4■□□□□ 0.54
TSEN54-209ENST00000583454 ATP6V1FQ16864 119 aa18.4■□□□□ 0.54
TSEN54-209ENST00000583454 SIGLEC15Q6ZMC9 328 aa18.4■□□□□ 0.54
TSEN54-209ENST00000583454 MGST2Q99735 147 aa18.4■□□□□ 0.54
TSEN54-209ENST00000583454 TMEM147Q9BVK8 224 aa18.4■□□□□ 0.54
TSEN54-209ENST00000583454 MAP6D1Q9H9H5 199 aa18.4■□□□□ 0.54
TSEN54-209ENST00000583454 WDR83OSQ9Y284 106 aa18.4■□□□□ 0.54
TSEN54-209ENST00000583454 AGPAT2O15120 278 aa18.39■□□□□ 0.53
TSEN54-209ENST00000583454 FAM24BQ8N5W8 94 aa18.39■□□□□ 0.53
TSEN54-209ENST00000583454 OR11H7Q8NGC8 314 aa18.39■□□□□ 0.53
TSEN54-209ENST00000583454 FBXL17Q9UF56 701 aa18.39■□□□□ 0.53
TSEN54-209ENST00000583454 LINC00869P0C866 280 aa18.38■□□□□ 0.53
TSEN54-209ENST00000583454 PET100P0DJ07 73 aa18.38■□□□□ 0.53
TSEN54-209ENST00000583454 EWSR1Q01844 656 aaKnown RBP eCLIP18.38■□□□□ 0.53
TSEN54-209ENST00000583454 ZNF546Q86UE3 836 aa18.38■□□□□ 0.53
TSEN54-209ENST00000583454 OR1B1Q8NGR6 318 aa18.38■□□□□ 0.53
TSEN54-209ENST00000583454 PPP1R14BQ96C90 147 aa18.38■□□□□ 0.53
TSEN54-209ENST00000583454 HYPMO75409 117 aa18.37■□□□□ 0.53
TSEN54-209ENST00000583454 ZNF98A6NK75 572 aa18.36■□□□□ 0.53
TSEN54-209ENST00000583454 S100A7P31151 101 aa18.36■□□□□ 0.53
TSEN54-209ENST00000583454 CAMLGP49069 296 aa18.36■□□□□ 0.53
TSEN54-209ENST00000583454 BAXQ07812 192 aa18.36■□□□□ 0.53
TSEN54-209ENST00000583454 RAB31Q13636 194 aa18.36■□□□□ 0.53
TSEN54-209ENST00000583454 PXDC1Q5TGL8 231 aa18.36■□□□□ 0.53
TSEN54-209ENST00000583454 APRG1Q8IVJ8 170 aa18.36■□□□□ 0.53
TSEN54-209ENST00000583454 CHAC2Q8WUX2 184 aa18.36■□□□□ 0.53
TSEN54-209ENST00000583454 NRN1Q9NPD7 142 aa18.36■□□□□ 0.53
TSEN54-209ENST00000583454 LOC102724200A0A096LPH7 203 aaPredicted RBP18.35■□□□□ 0.53
TSEN54-209ENST00000583454 PATE2Q6UY27 113 aa18.35■□□□□ 0.53
TSEN54-209ENST00000583454 OR8I2Q8N0Y5 310 aa18.35■□□□□ 0.53
TSEN54-209ENST00000583454 OR5C1Q8NGR4 320 aa18.35■□□□□ 0.53
TSEN54-209ENST00000583454 GGTLC1Q9BX51 225 aa18.35■□□□□ 0.53
TSEN54-209ENST00000583454 SEPSECSQ9HD40 501 aaKnown RBP18.35■□□□□ 0.53
TSEN54-209ENST00000583454 DOK5Q9P104 306 aa18.35■□□□□ 0.53
TSEN54-209ENST00000583454 HIGD1AQ9Y241 93 aa18.35■□□□□ 0.53
TSEN54-209ENST00000583454 DEFB131AP59861 70 aa18.34■□□□□ 0.53
TSEN54-209ENST00000583454 RAP2BP61225 183 aa18.34■□□□□ 0.53
TSEN54-209ENST00000583454 ZNF124Q15973 351 aa18.34■□□□□ 0.53
TSEN54-209ENST00000583454 SHANK2-AS3Q9BTD1 123 aa18.34■□□□□ 0.53
TSEN54-209ENST00000583454 SLC25A39Q9BZJ4 359 aaPredicted RBP18.34■□□□□ 0.53
TSEN54-209ENST00000583454 ARL6Q9H0F7 186 aa18.34■□□□□ 0.53
TSEN54-209ENST00000583454 MBD2Q9UBB5 411 aa18.34■□□□□ 0.53
TSEN54-209ENST00000583454 UBE2L5PA0A1B0GUS4 154 aa18.33■□□□□ 0.52
TSEN54-209ENST00000583454 H3BRN7 92 aa18.33■□□□□ 0.52
TSEN54-209ENST00000583454 PRR20EP86478 221 aa18.33■□□□□ 0.52
TSEN54-209ENST00000583454 PRR20CP86479 221 aa18.33■□□□□ 0.52
TSEN54-209ENST00000583454 PRR20DP86480 221 aa18.33■□□□□ 0.52
TSEN54-209ENST00000583454 PRR20BP86481 221 aa18.33■□□□□ 0.52
TSEN54-209ENST00000583454 PRR20AP86496 221 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms