RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 NUP35Q8NFH5 326 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 OR5A1Q8NGJ0 315 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 OR2T4Q8NH00 348 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 OR4C6Q8NH72 309 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 OR13C6PQ8NH95 151 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 OR10J5Q8NHC4 309 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 KLK6Q92876 244 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 ZHX1-C8orf76Q96EF9 292 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 TEX37Q96LM6 180 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 GPER1Q99527 375 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 GINS3Q9BRX5 216 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 PBDC1Q9BVG4 233 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 RTL8AQ9BWD3 113 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 TMEM133Q9H2Q1 129 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 BOLA2Q9H3K6 86 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 CENPHQ9H3R5 247 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 TRABDQ9H4I3 376 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 BIN3Q9NQY0 253 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 ACER3Q9NUN7 267 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 UQCC1Q9NVA1 299 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 RASL12Q9NYN1 266 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 SSR3Q9UNL2 185 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 SNURFQ9Y675 71 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 KIF24Q5T7B8 1368 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 ANK1P16157 1881 aa0.44□□□□□ -2.34
SMCHD1-206ENST00000581631 FSIP2Q5CZC0 6907 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 TECTAO75443 2155 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 EML5Q05BV3 1969 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 MYH13Q9UKX3 1938 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 TRAV14DV4A0A0A6YYC5 116 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 TRAV5A0A0B4J249 113 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 DUXBA0A1W2PPF3 345 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 RIIAD1A6NNX1 92 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 IBA57-AS1B1ANH7 110 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 PPP5D1E7EU14 171 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 C17orf112F2Z3M2 114 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 OR2T1O43869 369 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 OR1I1O60431 355 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 HYPMO75409 117 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 UBL3O95164 117 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 FAM107AO95990 144 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 IFNA4P05014 189 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 CTSDP07339 412 aaPredicted RBP0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 SMIM17P0DL12 118 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 BRS3P32247 399 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 SERPINB9P50453 376 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 RAB4BP61018 213 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 NCALDP61601 193 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 UBE2BP63146 152 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 TFAMQ00059 246 aaKnown RBP0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 PDE6HQ13956 83 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 CDK5R1Q15078 307 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 SURF2Q15527 256 aaPredicted RBP0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 TAF1AQ15573 450 aaPredicted RBP0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 C10orf55Q5SWW7 151 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 HACD4Q5VWC8 232 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 TRIQKQ629K1 86 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 C2orf82Q6UX34 121 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 LYG2Q86SG7 212 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 CROCCP2Q86T23 111 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 BPIFA4PQ86YQ2 179 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 Q8N2B8 174 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 LINC00301Q8NCQ3 95 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 OR8D4Q8NGM9 314 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 OR13D1Q8NGV5 346 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 CDC26Q8NHZ8 85 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 SLC25A40Q8TBP6 338 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 ZNF431Q8TF32 576 aaPredicted RBP0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 SLAMF6Q96DU3 332 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 MRPL57Q9BQC6 102 aaKnown RBP0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 SLC50A1Q9BRV3 221 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 ADAT1Q9BUB4 502 aaKnown RBP0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 OR2J1Q9GZK6 312 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 ATPIF1Q9UII2 106 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 PRNDQ9UKY0 176 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 SETD5Q9C0A6 1442 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 ROS1P08922 2347 aa0.43□□□□□ -2.34
SMCHD1-206ENST00000581631 NCOA6Q14686 2063 aaPredicted RBP0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 MYH6P13533 1939 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 CACNA1BQ00975 2339 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 ADGRB2O60241 1585 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 CD109Q6YHK3 1445 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 A0A087WX48 190 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 TRAV12-1A0A0B4J245 112 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 IGKV1-9A0A0C4DH69 117 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 A0A1B0GV72 72 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 TLCD2A6NGC4 264 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 C1orf196B1AJZ1 125 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 TMEM238C9JI98 176 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 TAX1BP3O14907 124 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 NDUFB3O43676 98 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 BANF1O75531 89 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 DHFRP00374 187 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 UBBP0CG47 229 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 HLA-EP13747 358 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 IDO1P14902 403 aa0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 OGNP20774 298 aaKnown RBP0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 FKBP2P26885 142 aaKnown RBP0.42□□□□□ -2.34
SMCHD1-206ENST00000581631 SERPINB1P30740 379 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms