RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 HBG1P69891 147 aa12.18□□□□□ -0.46
IFT20-210ENST00000580357 HBG2P69892 147 aa12.18□□□□□ -0.46
IFT20-210ENST00000580357 RAB31Q13636 194 aa12.18□□□□□ -0.46
IFT20-210ENST00000580357 ATP6V1FQ16864 119 aa12.18□□□□□ -0.46
IFT20-210ENST00000580357 PXDC1Q5TGL8 231 aa12.18□□□□□ -0.46
IFT20-210ENST00000580357 C11orf1Q9H5F2 150 aa12.18□□□□□ -0.46
IFT20-210ENST00000580357 MAP6D1Q9H9H5 199 aa12.18□□□□□ -0.46
IFT20-210ENST00000580357 LYRM2Q9NU23 88 aaPredicted RBP12.18□□□□□ -0.46
IFT20-210ENST00000580357 COL7A1Q02388 2944 aa12.17□□□□□ -0.46
IFT20-210ENST00000580357 SULT1A1P50225 295 aa12.17□□□□□ -0.46
IFT20-210ENST00000580357 PLP1P60201 277 aa12.17□□□□□ -0.46
IFT20-210ENST00000580357 SNRPD3P62318 126 aaKnown RBP12.17□□□□□ -0.46
IFT20-210ENST00000580357 STX12Q86Y82 276 aa12.17□□□□□ -0.46
IFT20-210ENST00000580357 APRG1Q8IVJ8 170 aa12.17□□□□□ -0.46
IFT20-210ENST00000580357 STPG3Q8N7X2 389 aa12.17□□□□□ -0.46
IFT20-210ENST00000580357 DCANP1Q8TF63 244 aa12.17□□□□□ -0.46
IFT20-210ENST00000580357 GPR82Q96P67 336 aa12.17□□□□□ -0.46
IFT20-210ENST00000580357 TMEM147Q9BVK8 224 aa12.17□□□□□ -0.46
IFT20-210ENST00000580357 SLC25A31Q9H0C2 315 aa12.17□□□□□ -0.46
IFT20-210ENST00000580357 NRN1Q9NPD7 142 aa12.17□□□□□ -0.46
IFT20-210ENST00000580357 FAM24AA6NFZ4 105 aa12.16□□□□□ -0.46
IFT20-210ENST00000580357 E5RGE8 158 aa12.16□□□□□ -0.46
IFT20-210ENST00000580357 CCNKO75909 580 aa12.16□□□□□ -0.46
IFT20-210ENST00000580357 ORM2P19652 201 aa12.16□□□□□ -0.46
IFT20-210ENST00000580357 DEFB131AP59861 70 aa12.16□□□□□ -0.46
IFT20-210ENST00000580357 SLC38A11Q08AI6 406 aa12.16□□□□□ -0.46
IFT20-210ENST00000580357 SAMD13Q5VXD3 122 aa12.16□□□□□ -0.46
IFT20-210ENST00000580357 Q6ZWC4 215 aa12.16□□□□□ -0.46
IFT20-210ENST00000580357 OR8I2Q8N0Y5 310 aa12.16□□□□□ -0.46
IFT20-210ENST00000580357 TMEM252Q8N6L7 170 aa12.16□□□□□ -0.46
IFT20-210ENST00000580357 HYPMO75409 117 aa12.15□□□□□ -0.46
IFT20-210ENST00000580357 SIX6O95475 246 aa12.15□□□□□ -0.46
IFT20-210ENST00000580357 ID1P41134 155 aa12.15□□□□□ -0.46
IFT20-210ENST00000580357 RAP2BP61225 183 aa12.15□□□□□ -0.46
IFT20-210ENST00000580357 ARL16Q0P5N6 197 aa12.15□□□□□ -0.46
IFT20-210ENST00000580357 ZNF546Q86UE3 836 aa12.15□□□□□ -0.46
IFT20-210ENST00000580357 OR1B1Q8NGR6 318 aa12.15□□□□□ -0.46
IFT20-210ENST00000580357 CSTL1Q9H114 145 aa12.15□□□□□ -0.46
IFT20-210ENST00000580357 TP53TG1Q9Y2A0 90 aa12.15□□□□□ -0.46
IFT20-210ENST00000580357 ZNF98A6NK75 572 aa12.14□□□□□ -0.47
IFT20-210ENST00000580357 CST7O76096 145 aa12.14□□□□□ -0.47
IFT20-210ENST00000580357 PET100P0DJ07 73 aa12.14□□□□□ -0.47
IFT20-210ENST00000580357 GATA2P23769 480 aaPredicted RBP12.14□□□□□ -0.47
IFT20-210ENST00000580357 GALR1P47211 349 aa12.14□□□□□ -0.47
IFT20-210ENST00000580357 MEOX2P50222 304 aa12.14□□□□□ -0.47
IFT20-210ENST00000580357 TMEM182Q6ZP80 229 aaPredicted RBP12.14□□□□□ -0.47
IFT20-210ENST00000580357 STHQ8IWL8 128 aa12.14□□□□□ -0.47
IFT20-210ENST00000580357 UQCC1Q9NVA1 299 aa12.14□□□□□ -0.47
IFT20-210ENST00000580357 HIGD1AQ9Y241 93 aa12.14□□□□□ -0.47
IFT20-210ENST00000580357 AGPAT2O15120 278 aa12.13□□□□□ -0.47
IFT20-210ENST00000580357 ZNF688P0C7X2 276 aa12.13□□□□□ -0.47
IFT20-210ENST00000580357 LINC00869P0C866 280 aa12.13□□□□□ -0.47
IFT20-210ENST00000580357 RPL35AP18077 110 aaKnown RBP12.13□□□□□ -0.47
IFT20-210ENST00000580357 VWC2Q2TAL6 325 aa12.13□□□□□ -0.47
IFT20-210ENST00000580357 TMEM217Q8N7C4 229 aa12.13□□□□□ -0.47
IFT20-210ENST00000580357 ELOA3CA0A087WX78 387 aaPredicted RBP12.12□□□□□ -0.47
IFT20-210ENST00000580357 H2BFSP57053 126 aa12.12□□□□□ -0.47
IFT20-210ENST00000580357 TMEM41BQ5BJD5 291 aa12.12□□□□□ -0.47
IFT20-210ENST00000580357 FAM24BQ8N5W8 94 aa12.12□□□□□ -0.47
IFT20-210ENST00000580357 CHAC2Q8WUX2 184 aa12.12□□□□□ -0.47
IFT20-210ENST00000580357 WDR83OSQ9Y284 106 aa12.12□□□□□ -0.47
IFT20-210ENST00000580357 IGSF23A1L1A6 192 aa12.11□□□□□ -0.47
IFT20-210ENST00000580357 C3orf84H3BNL1 204 aa12.11□□□□□ -0.47
IFT20-210ENST00000580357 SPRY2O43597 315 aa12.11□□□□□ -0.47
IFT20-210ENST00000580357 MPDU1O75352 247 aa12.11□□□□□ -0.47
IFT20-210ENST00000580357 OR5G3P0C626 314 aa12.11□□□□□ -0.47
IFT20-210ENST00000580357 CAMLGP49069 296 aa12.11□□□□□ -0.47
IFT20-210ENST00000580357 BAXQ07812 192 aa12.11□□□□□ -0.47
IFT20-210ENST00000580357 LEMD1Q68G75 181 aa12.11□□□□□ -0.47
IFT20-210ENST00000580357 MORN3Q6PF18 240 aaPredicted RBP12.11□□□□□ -0.47
IFT20-210ENST00000580357 Q6ZRG5 221 aa12.11□□□□□ -0.47
IFT20-210ENST00000580357 PPP1R1CQ8WVI7 109 aa12.11□□□□□ -0.47
IFT20-210ENST00000580357 OVOL2Q9BRP0 275 aa12.11□□□□□ -0.47
IFT20-210ENST00000580357 SHANK2-AS3Q9BTD1 123 aa12.11□□□□□ -0.47
IFT20-210ENST00000580357 SLC25A39Q9BZJ4 359 aaPredicted RBP12.11□□□□□ -0.47
IFT20-210ENST00000580357 ARL6Q9H0F7 186 aa12.11□□□□□ -0.47
IFT20-210ENST00000580357 SLC25A22Q9H936 323 aa12.11□□□□□ -0.47
IFT20-210ENST00000580357 RYR3Q15413 4870 aa12.11□□□□□ -0.47
IFT20-210ENST00000580357 H3BRN7 92 aa12.1□□□□□ -0.47
IFT20-210ENST00000580357 ISLRO14498 428 aa12.1□□□□□ -0.47
IFT20-210ENST00000580357 RPL7P18124 248 aaKnown RBP12.1□□□□□ -0.47
IFT20-210ENST00000580357 PSMB3P49720 205 aa12.1□□□□□ -0.47
IFT20-210ENST00000580357 ZNF124Q15973 351 aa12.1□□□□□ -0.47
IFT20-210ENST00000580357 LRRC37A5PQ49AS3 106 aa12.1□□□□□ -0.47
IFT20-210ENST00000580357 PSMG4Q5JS54 123 aa12.1□□□□□ -0.47
IFT20-210ENST00000580357 IL17DQ8TAD2 202 aa12.1□□□□□ -0.47
IFT20-210ENST00000580357 GATAD1Q8WUU5 269 aa12.1□□□□□ -0.47
IFT20-210ENST00000580357 RNF183Q96D59 192 aa12.1□□□□□ -0.47
IFT20-210ENST00000580357 ALG5Q9Y673 324 aa12.1□□□□□ -0.47
IFT20-210ENST00000580357 MPC2O95563 127 aa12.09□□□□□ -0.47
IFT20-210ENST00000580357 SPP1P10451 314 aa12.09□□□□□ -0.47
IFT20-210ENST00000580357 RPL29P47914 159 aaKnown RBP12.09□□□□□ -0.47
IFT20-210ENST00000580357 NUTF2P61970 127 aaKnown RBP12.09□□□□□ -0.47
IFT20-210ENST00000580357 NHLH2Q02577 135 aa12.09□□□□□ -0.47
IFT20-210ENST00000580357 RGS21Q2M5E4 152 aa12.09□□□□□ -0.47
IFT20-210ENST00000580357 SPATA31B1PQ5VZV4 182 aa12.09□□□□□ -0.47
IFT20-210ENST00000580357 MUC7Q8TAX7 377 aa12.09□□□□□ -0.47
IFT20-210ENST00000580357 MGST2Q99735 147 aa12.09□□□□□ -0.47
IFT20-210ENST00000580357 RSG1Q9BU20 258 aa12.09□□□□□ -0.47
IFT20-210ENST00000580357 MED28Q9H204 178 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms