RNA–Protein interactions for RNA: ENST00000578670.5

GIT1-208, Transcript of GIT ArfGAP 1, human

TSL 3

Gene GIT1, Length 918 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GIT1-208	ENST00000578670	TMEM190	Q8WZ59	177 aa		13.65	□□□□□ -0.22
GIT1-208	ENST00000578670	UHRF2	Q96PU4	802 aa		13.65	□□□□□ -0.22
GIT1-208	ENST00000578670	RNF2	Q99496	336 aa		13.65	□□□□□ -0.22
GIT1-208	ENST00000578670	FUT9	Q9Y231	359 aa		13.65	□□□□□ -0.22
GIT1-208	ENST00000578670	HIGD1A	Q9Y241	93 aa		13.65	□□□□□ -0.22
GIT1-208	ENST00000578670	CTXND1	A0A1B0GTU2	59 aa		13.64	□□□□□ -0.23
GIT1-208	ENST00000578670		A0A1W2PPV4	95 aa		13.64	□□□□□ -0.23
GIT1-208	ENST00000578670		A0A1W2PRX2	142 aa		13.64	□□□□□ -0.23
GIT1-208	ENST00000578670	LINC01619	G3V211	115 aa		13.64	□□□□□ -0.23
GIT1-208	ENST00000578670	BLOC1S1	P78537	153 aa		13.64	□□□□□ -0.23
GIT1-208	ENST00000578670	CLLU1	Q5K131	121 aa		13.64	□□□□□ -0.23
GIT1-208	ENST00000578670	MORN5	Q5VZ52	161 aa		13.64	□□□□□ -0.23
GIT1-208	ENST00000578670	LINC00305	Q7Z4B0	112 aa		13.64	□□□□□ -0.23
GIT1-208	ENST00000578670	OR1N2	Q8NGR9	330 aa		13.64	□□□□□ -0.23
GIT1-208	ENST00000578670	RAB24	Q969Q5	203 aa		13.64	□□□□□ -0.23
GIT1-208	ENST00000578670	MRPL32	Q9BYC8	188 aa	Known RBP	13.64	□□□□□ -0.23
GIT1-208	ENST00000578670	SLC25A22	Q9H936	323 aa		13.64	□□□□□ -0.23
GIT1-208	ENST00000578670	IGHV3OR16-8	A0A075B7F1	116 aa		13.63	□□□□□ -0.23
GIT1-208	ENST00000578670	EIF3G	O75821	320 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
GIT1-208	ENST00000578670	H2AFB1	P0C5Y9	115 aa		13.63	□□□□□ -0.23
GIT1-208	ENST00000578670	ZP3	P21754	424 aa		13.63	□□□□□ -0.23
GIT1-208	ENST00000578670	HOXD3	P31249	432 aa	Predicted RBP	13.63	□□□□□ -0.23
GIT1-208	ENST00000578670	RAB14	P61106	215 aa		13.63	□□□□□ -0.23
GIT1-208	ENST00000578670	FHL3	Q13643	280 aa		13.63	□□□□□ -0.23
GIT1-208	ENST00000578670	FAM106A	Q4KMX7	169 aa		13.63	□□□□□ -0.23
GIT1-208	ENST00000578670	MIR17HG	Q75NE6	70 aa		13.63	□□□□□ -0.23
GIT1-208	ENST00000578670	NDUFA11	Q86Y39	141 aa		13.63	□□□□□ -0.23
GIT1-208	ENST00000578670	RAX2	Q96IS3	184 aa		13.63	□□□□□ -0.23
GIT1-208	ENST00000578670	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.63	□□□□□ -0.23
GIT1-208	ENST00000578670	RABAC1	Q9UI14	185 aa		13.63	□□□□□ -0.23
GIT1-208	ENST00000578670		H3BRN7	92 aa		13.62	□□□□□ -0.23
GIT1-208	ENST00000578670	KLF5	Q13887	457 aa	Predicted RBP	13.62	□□□□□ -0.23
GIT1-208	ENST00000578670	LYPD6B	Q8NI32	183 aa		13.62	□□□□□ -0.23
GIT1-208	ENST00000578670	DPF1	Q92782	380 aa		13.62	□□□□□ -0.23
GIT1-208	ENST00000578670	DUX3	Q96PT4	197 aa		13.62	□□□□□ -0.23
GIT1-208	ENST00000578670	CITED1	Q99966	193 aa		13.62	□□□□□ -0.23
GIT1-208	ENST00000578670	SHANK2-AS3	Q9BTD1	123 aa		13.62	□□□□□ -0.23
GIT1-208	ENST00000578670	TRAV1-1	A0A0B4J248	108 aa		13.61	□□□□□ -0.23
GIT1-208	ENST00000578670	TRAV5	A0A0B4J249	113 aa		13.61	□□□□□ -0.23
GIT1-208	ENST00000578670	LGALS9	O00182	355 aa		13.61	□□□□□ -0.23
GIT1-208	ENST00000578670	HMGB3	O15347	200 aa	Known RBP	13.61	□□□□□ -0.23
GIT1-208	ENST00000578670	STAG3L2	P0CL84	134 aa		13.61	□□□□□ -0.23
GIT1-208	ENST00000578670	STAG3L3	P0CL85	134 aa		13.61	□□□□□ -0.23
GIT1-208	ENST00000578670	C8orf88	P0DMB2	117 aa		13.61	□□□□□ -0.23
GIT1-208	ENST00000578670	CRYBB3	P26998	211 aa		13.61	□□□□□ -0.23
GIT1-208	ENST00000578670	SLURP1	P55000	103 aa		13.61	□□□□□ -0.23
GIT1-208	ENST00000578670	LCN15	Q6UWW0	184 aa		13.61	□□□□□ -0.23
GIT1-208	ENST00000578670	REC114	Q7Z4M0	266 aa		13.61	□□□□□ -0.23
GIT1-208	ENST00000578670	S100A7A	Q86SG5	101 aa		13.61	□□□□□ -0.23
GIT1-208	ENST00000578670	SFT2D1	Q8WV19	159 aa		13.61	□□□□□ -0.23
GIT1-208	ENST00000578670	FAM167A-AS1	Q96KT0	104 aa		13.61	□□□□□ -0.23
GIT1-208	ENST00000578670	C20orf24	Q9BUV8	137 aa		13.61	□□□□□ -0.23
GIT1-208	ENST00000578670		U3KQE9	123 aa		13.61	□□□□□ -0.23
GIT1-208	ENST00000578670	FBN1	P35555	2871 aa	Known RBP	13.61	□□□□□ -0.23
GIT1-208	ENST00000578670	ZNF320	A2RRD8	509 aa		13.6	□□□□□ -0.23
GIT1-208	ENST00000578670	MAP1LC3B2	A6NCE7	125 aa		13.6	□□□□□ -0.23
GIT1-208	ENST00000578670		K7EMT4	169 aa		13.6	□□□□□ -0.23
GIT1-208	ENST00000578670	CCL24	O00175	119 aa		13.6	□□□□□ -0.23
GIT1-208	ENST00000578670	ZNF207	O43670	478 aa	Known RBP	13.6	□□□□□ -0.23
GIT1-208	ENST00000578670	C1QL4	Q86Z23	238 aa		13.6	□□□□□ -0.23
GIT1-208	ENST00000578670	METTL26	Q96S19	204 aa		13.6	□□□□□ -0.23
GIT1-208	ENST00000578670	SCRT1	Q9BWW7	348 aa		13.6	□□□□□ -0.23
GIT1-208	ENST00000578670	SLC25A2	Q9BXI2	301 aa		13.6	□□□□□ -0.23
GIT1-208	ENST00000578670	MAP1LC3B	Q9GZQ8	125 aa		13.6	□□□□□ -0.23
GIT1-208	ENST00000578670	TECR	Q9NZ01	308 aa	Known RBP	13.6	□□□□□ -0.23
GIT1-208	ENST00000578670	TENM1	Q9UKZ4	2725 aa		13.6	□□□□□ -0.23
GIT1-208	ENST00000578670	ZNF98	A6NK75	572 aa		13.59	□□□□□ -0.23
GIT1-208	ENST00000578670		A8MWP6	167 aa		13.59	□□□□□ -0.23
GIT1-208	ENST00000578670	NPPC	P23582	126 aa		13.59	□□□□□ -0.23
GIT1-208	ENST00000578670	S100A7	P31151	101 aa		13.59	□□□□□ -0.23
GIT1-208	ENST00000578670	FGF8	P55075	233 aa	Predicted RBP	13.59	□□□□□ -0.23
GIT1-208	ENST00000578670	SYNJ2BP	P57105	145 aa		13.59	□□□□□ -0.23
GIT1-208	ENST00000578670	TAS2R45	P59539	299 aa		13.59	□□□□□ -0.23
GIT1-208	ENST00000578670	NSUN5P1	Q3KNT7	163 aa		13.59	□□□□□ -0.23
GIT1-208	ENST00000578670	LEMD1	Q68G75	181 aa		13.59	□□□□□ -0.23
GIT1-208	ENST00000578670	TMEM158	Q8WZ71	300 aa		13.59	□□□□□ -0.23
GIT1-208	ENST00000578670	ZNF503	Q96F45	646 aa		13.59	□□□□□ -0.23
GIT1-208	ENST00000578670	DAZ1	Q9NQZ3	744 aa	Known RBP	13.59	□□□□□ -0.23
GIT1-208	ENST00000578670	UFC1	Q9Y3C8	167 aa		13.59	□□□□□ -0.23
GIT1-208	ENST00000578670	BUB3	O43684	328 aa		13.58	□□□□□ -0.24
GIT1-208	ENST00000578670	HBE1	P02100	147 aa		13.58	□□□□□ -0.24
GIT1-208	ENST00000578670	APOH	P02749	345 aa	Predicted RBP	13.58	□□□□□ -0.24
GIT1-208	ENST00000578670	TM4SF20	Q53R12	229 aa		13.58	□□□□□ -0.24
GIT1-208	ENST00000578670	KHDC3L	Q587J8	217 aa		13.58	□□□□□ -0.24
GIT1-208	ENST00000578670	HRH4	Q9H3N8	390 aa		13.58	□□□□□ -0.24
GIT1-208	ENST00000578670		A0A1B0GV50	99 aa		13.57	□□□□□ -0.24
GIT1-208	ENST00000578670	TMEM213	A2RRL7	107 aa		13.57	□□□□□ -0.24
GIT1-208	ENST00000578670	CXorf1	O96002	111 aa		13.57	□□□□□ -0.24
GIT1-208	ENST00000578670	ARL14EPL	P0DKL9	152 aa		13.57	□□□□□ -0.24
GIT1-208	ENST00000578670	MYCNOS	P40205	109 aa		13.57	□□□□□ -0.24
GIT1-208	ENST00000578670	CCL20	P78556	96 aa		13.57	□□□□□ -0.24
GIT1-208	ENST00000578670	PQLC2	Q6ZP29	291 aa		13.57	□□□□□ -0.24
GIT1-208	ENST00000578670	LURAP1L	Q8IV03	231 aa		13.57	□□□□□ -0.24
GIT1-208	ENST00000578670	DLX4	Q92988	240 aa	Predicted RBP	13.57	□□□□□ -0.24
GIT1-208	ENST00000578670	PFDN2	Q9UHV9	154 aa		13.57	□□□□□ -0.24
GIT1-208	ENST00000578670	RNF24	Q9Y225	148 aa		13.57	□□□□□ -0.24
GIT1-208	ENST00000578670	IGHV7-4-1	A0A0J9YVY3	117 aa		13.56	□□□□□ -0.24
GIT1-208	ENST00000578670	TEX46	H3BTG2	121 aa		13.56	□□□□□ -0.24
GIT1-208	ENST00000578670	C1orf194	Q5T5A4	169 aa		13.56	□□□□□ -0.24
GIT1-208	ENST00000578670	STXBP6	Q8NFX7	210 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms