RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 MPC2O95563 127 aa10.07□□□□□ -0.8
CIITA-210ENST00000575513 PET100P0DJ07 73 aa10.07□□□□□ -0.8
CIITA-210ENST00000575513 S100A7P31151 101 aa10.07□□□□□ -0.8
CIITA-210ENST00000575513 TFPI2P48307 235 aa10.07□□□□□ -0.8
CIITA-210ENST00000575513 SULT1A1P50225 295 aa10.07□□□□□ -0.8
CIITA-210ENST00000575513 APOC4P55056 127 aa10.07□□□□□ -0.8
CIITA-210ENST00000575513 RRAS2P62070 204 aaPredicted RBP10.07□□□□□ -0.8
CIITA-210ENST00000575513 AKR1C1Q04828 323 aa10.07□□□□□ -0.8
CIITA-210ENST00000575513 OR11H7Q8NGC8 314 aa10.07□□□□□ -0.8
CIITA-210ENST00000575513 NPVFQ9HCQ7 196 aa10.07□□□□□ -0.8
CIITA-210ENST00000575513 IGSF23A1L1A6 192 aa10.06□□□□□ -0.8
CIITA-210ENST00000575513 K7EQG2 157 aa10.06□□□□□ -0.8
CIITA-210ENST00000575513 GIPP09681 153 aaPredicted RBP10.06□□□□□ -0.8
CIITA-210ENST00000575513 SELENOTP62341 195 aa10.06□□□□□ -0.8
CIITA-210ENST00000575513 LRRC37A5PQ49AS3 106 aa10.06□□□□□ -0.8
CIITA-210ENST00000575513 STX12Q86Y82 276 aa10.06□□□□□ -0.8
CIITA-210ENST00000575513 BPIFCQ8NFQ6 507 aa10.06□□□□□ -0.8
CIITA-210ENST00000575513 DCANP1Q8TF63 244 aa10.06□□□□□ -0.8
CIITA-210ENST00000575513 PBDC1Q9BVG4 233 aa10.06□□□□□ -0.8
CIITA-210ENST00000575513 SLC25A31Q9H0C2 315 aa10.06□□□□□ -0.8
CIITA-210ENST00000575513 MAP6D1Q9H9H5 199 aa10.06□□□□□ -0.8
CIITA-210ENST00000575513 OR5AC2Q9NZP5 309 aa10.06□□□□□ -0.8
CIITA-210ENST00000575513 FBXL17Q9UF56 701 aa10.06□□□□□ -0.8
CIITA-210ENST00000575513 CST7O76096 145 aa10.05□□□□□ -0.8
CIITA-210ENST00000575513 LYL1P12980 280 aa10.05□□□□□ -0.8
CIITA-210ENST00000575513 S100A11P31949 105 aa10.05□□□□□ -0.8
CIITA-210ENST00000575513 LYZP61626 148 aa10.05□□□□□ -0.8
CIITA-210ENST00000575513 HBG1P69891 147 aa10.05□□□□□ -0.8
CIITA-210ENST00000575513 HBG2P69892 147 aa10.05□□□□□ -0.8
CIITA-210ENST00000575513 SLC38A11Q08AI6 406 aa10.05□□□□□ -0.8
CIITA-210ENST00000575513 ATP6V1FQ16864 119 aa10.05□□□□□ -0.8
CIITA-210ENST00000575513 SIGLEC15Q6ZMC9 328 aa10.05□□□□□ -0.8
CIITA-210ENST00000575513 Q6ZWC4 215 aa10.05□□□□□ -0.8
CIITA-210ENST00000575513 WFDC3Q8IUB2 231 aa10.05□□□□□ -0.8
CIITA-210ENST00000575513 STXBP6Q8NFX7 210 aa10.05□□□□□ -0.8
CIITA-210ENST00000575513 TP53TG1Q9Y2A0 90 aa10.05□□□□□ -0.8
CIITA-210ENST00000575513 SMCO3A2RU48 225 aa10.04□□□□□ -0.8
CIITA-210ENST00000575513 PLP1P60201 277 aa10.04□□□□□ -0.8
CIITA-210ENST00000575513 RAP2BP61225 183 aa10.04□□□□□ -0.8
CIITA-210ENST00000575513 BAXQ07812 192 aa10.04□□□□□ -0.8
CIITA-210ENST00000575513 OR2F1Q13607 317 aa10.04□□□□□ -0.8
CIITA-210ENST00000575513 VWC2Q2TAL6 325 aa10.04□□□□□ -0.8
CIITA-210ENST00000575513 TEPPQ6URK8 271 aa10.04□□□□□ -0.8
CIITA-210ENST00000575513 CYP2G1PQ6ZSU1 146 aa10.04□□□□□ -0.8
CIITA-210ENST00000575513 APRG1Q8IVJ8 170 aa10.04□□□□□ -0.8
CIITA-210ENST00000575513 TMEM217Q8N7C4 229 aa10.04□□□□□ -0.8
CIITA-210ENST00000575513 STPG3Q8N7X2 389 aa10.04□□□□□ -0.8
CIITA-210ENST00000575513 TMEM147Q9BVK8 224 aa10.04□□□□□ -0.8
CIITA-210ENST00000575513 NRN1Q9NPD7 142 aa10.04□□□□□ -0.8
CIITA-210ENST00000575513 MBD2Q9UBB5 411 aa10.04□□□□□ -0.8
CIITA-210ENST00000575513 DEFB131AP59861 70 aa10.03□□□□□ -0.8
CIITA-210ENST00000575513 EWSR1Q01844 656 aaKnown RBP eCLIP10.03□□□□□ -0.8
CIITA-210ENST00000575513 SAMD13Q5VXD3 122 aa10.03□□□□□ -0.8
CIITA-210ENST00000575513 S100A7AQ86SG5 101 aa10.03□□□□□ -0.8
CIITA-210ENST00000575513 EDA2RQ9HAV5 297 aa10.03□□□□□ -0.8
CIITA-210ENST00000575513 UQCC1Q9NVA1 299 aa10.03□□□□□ -0.8
CIITA-210ENST00000575513 DNAH7Q8WXX0 4024 aa10.03□□□□□ -0.8
CIITA-210ENST00000575513 C3orf84H3BNL1 204 aa10.02□□□□□ -0.81
CIITA-210ENST00000575513 SNRPD3P62318 126 aaKnown RBP10.02□□□□□ -0.81
CIITA-210ENST00000575513 FGL1Q08830 312 aa10.02□□□□□ -0.81
CIITA-210ENST00000575513 PXDC1Q5TGL8 231 aa10.02□□□□□ -0.81
CIITA-210ENST00000575513 TMEM182Q6ZP80 229 aaPredicted RBP10.02□□□□□ -0.81
CIITA-210ENST00000575513 FAM24BQ8N5W8 94 aa10.02□□□□□ -0.81
CIITA-210ENST00000575513 THAP6Q8TBB0 222 aa10.02□□□□□ -0.81
CIITA-210ENST00000575513 CHAC2Q8WUX2 184 aa10.02□□□□□ -0.81
CIITA-210ENST00000575513 PPP1R14BQ96C90 147 aa10.02□□□□□ -0.81
CIITA-210ENST00000575513 GPR82Q96P67 336 aa10.02□□□□□ -0.81
CIITA-210ENST00000575513 CSTL1Q9H114 145 aa10.02□□□□□ -0.81
CIITA-210ENST00000575513 RNF24Q9Y225 148 aa10.02□□□□□ -0.81
CIITA-210ENST00000575513 WDR83OSQ9Y284 106 aa10.02□□□□□ -0.81
CIITA-210ENST00000575513 ZNF98A6NK75 572 aa10.01□□□□□ -0.81
CIITA-210ENST00000575513 ORM2P19652 201 aa10.01□□□□□ -0.81
CIITA-210ENST00000575513 GATA2P23769 480 aaPredicted RBP10.01□□□□□ -0.81
CIITA-210ENST00000575513 NHLH2Q02577 135 aa10.01□□□□□ -0.81
CIITA-210ENST00000575513 RAB31Q13636 194 aa10.01□□□□□ -0.81
CIITA-210ENST00000575513 OR8I2Q8N0Y5 310 aa10.01□□□□□ -0.81
CIITA-210ENST00000575513 OVOL2Q9BRP0 275 aa10.01□□□□□ -0.81
CIITA-210ENST00000575513 HSPB11Q9Y547 144 aa10.01□□□□□ -0.81
CIITA-210ENST00000575513 AGPAT2O15120 278 aa10□□□□□ -0.81
CIITA-210ENST00000575513 SPRY2O43597 315 aa10□□□□□ -0.81
CIITA-210ENST00000575513 HYPMO75409 117 aa10□□□□□ -0.81
CIITA-210ENST00000575513 RPL35AP18077 110 aaKnown RBP10□□□□□ -0.81
CIITA-210ENST00000575513 RPL12P30050 165 aaKnown RBP10□□□□□ -0.81
CIITA-210ENST00000575513 ID1P41134 155 aa10□□□□□ -0.81
CIITA-210ENST00000575513 GALR1P47211 349 aa10□□□□□ -0.81
CIITA-210ENST00000575513 ZNF124Q15973 351 aa10□□□□□ -0.81
CIITA-210ENST00000575513 Q6ZNX1 250 aa10□□□□□ -0.81
CIITA-210ENST00000575513 ZNF546Q86UE3 836 aa10□□□□□ -0.81
CIITA-210ENST00000575513 STHQ8IWL8 128 aa10□□□□□ -0.81
CIITA-210ENST00000575513 OR1B1Q8NGR6 318 aa10□□□□□ -0.81
CIITA-210ENST00000575513 MUC7Q8TAX7 377 aa10□□□□□ -0.81
CIITA-210ENST00000575513 RNF183Q96D59 192 aa10□□□□□ -0.81
CIITA-210ENST00000575513 MPDU1O75352 247 aa9.99□□□□□ -0.81
CIITA-210ENST00000575513 ZNF688P0C7X2 276 aa9.99□□□□□ -0.81
CIITA-210ENST00000575513 LINC00869P0C866 280 aa9.99□□□□□ -0.81
CIITA-210ENST00000575513 MEOX2P50222 304 aa9.99□□□□□ -0.81
CIITA-210ENST00000575513 TMEM41BQ5BJD5 291 aa9.99□□□□□ -0.81
CIITA-210ENST00000575513 Q5BKY6 102 aa9.99□□□□□ -0.81
CIITA-210ENST00000575513 LEMD1Q68G75 181 aa9.99□□□□□ -0.81
CIITA-210ENST00000575513 OR5C1Q8NGR4 320 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms