RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 KBTBD11-OT1A0A1B0GTJ5 212 aa7.78□□□□□ -1.16
CCDC40-212ENST00000574799 A0A1B0GWB2 263 aa7.78□□□□□ -1.16
CCDC40-212ENST00000574799 PSMB11A5LHX3 300 aa7.78□□□□□ -1.16
CCDC40-212ENST00000574799 SMIM17P0DL12 118 aa7.78□□□□□ -1.16
CCDC40-212ENST00000574799 LINC00305Q7Z4B0 112 aa7.78□□□□□ -1.16
CCDC40-212ENST00000574799 WDR86Q86TI4 376 aa7.78□□□□□ -1.16
CCDC40-212ENST00000574799 IGHV3-21A0A0B4J1V1 117 aa7.77□□□□□ -1.16
CCDC40-212ENST00000574799 F2RL2O00254 374 aa7.77□□□□□ -1.16
CCDC40-212ENST00000574799 SMAD7O15105 426 aaKnown RBP7.77□□□□□ -1.16
CCDC40-212ENST00000574799 LYZL6O75951 148 aa7.77□□□□□ -1.16
CCDC40-212ENST00000574799 CT45A6P0DMU7 189 aa7.77□□□□□ -1.16
CCDC40-212ENST00000574799 CT45A5P0DMU8 189 aa7.77□□□□□ -1.16
CCDC40-212ENST00000574799 CT45A10P0DMU9 189 aa7.77□□□□□ -1.16
CCDC40-212ENST00000574799 CT45A7P0DMV0 189 aa7.77□□□□□ -1.16
CCDC40-212ENST00000574799 PRDX2P32119 198 aa7.77□□□□□ -1.16
CCDC40-212ENST00000574799 REG1BP48304 166 aa7.77□□□□□ -1.16
CCDC40-212ENST00000574799 CT45A1Q5HYN5 189 aa7.77□□□□□ -1.16
CCDC40-212ENST00000574799 OR9G4Q8NGQ1 327 aa7.77□□□□□ -1.16
CCDC40-212ENST00000574799 CT45A3Q8NHU0 189 aa7.77□□□□□ -1.16
CCDC40-212ENST00000574799 IGF2BP2-AS1Q96M15 143 aa7.77□□□□□ -1.16
CCDC40-212ENST00000574799 LINC00470Q9BZP3 86 aa7.77□□□□□ -1.16
CCDC40-212ENST00000574799 GEMIN7Q9H840 131 aaKnown RBP7.77□□□□□ -1.16
CCDC40-212ENST00000574799 RALYQ9UKM9 306 aaKnown RBP7.77□□□□□ -1.16
CCDC40-212ENST00000574799 EPDR1Q9UM22 224 aa7.77□□□□□ -1.16
CCDC40-212ENST00000574799 KLF13Q9Y2Y9 288 aaPredicted RBP7.77□□□□□ -1.16
CCDC40-212ENST00000574799 TACC2O95359 2948 aa7.77□□□□□ -1.17
CCDC40-212ENST00000574799 MOSP00540 346 aa7.77□□□□□ -1.17
CCDC40-212ENST00000574799 CNEP1R1Q8N9A8 125 aa7.77□□□□□ -1.17
CCDC40-212ENST00000574799 IFI27L2Q9H2X8 130 aa7.77□□□□□ -1.17
CCDC40-212ENST00000574799 ASH1LQ9NR48 2969 aaKnown RBP7.77□□□□□ -1.17
CCDC40-212ENST00000574799 ITPR1Q14643 2758 aa7.77□□□□□ -1.17
CCDC40-212ENST00000574799 A0A1B0GUT8 65 aa7.77□□□□□ -1.17
CCDC40-212ENST00000574799 SPAARA0A1B0GVQ0 90 aa7.77□□□□□ -1.17
CCDC40-212ENST00000574799 K7ERJ3 54 aa7.77□□□□□ -1.17
CCDC40-212ENST00000574799 KLK10O43240 276 aa7.77□□□□□ -1.17
CCDC40-212ENST00000574799 APELAP0DMC3 54 aa7.77□□□□□ -1.17
CCDC40-212ENST00000574799 SUB1P53999 127 aaKnown RBP eCLIP7.77□□□□□ -1.17
CCDC40-212ENST00000574799 FAM231DQ6ZW35 169 aa7.77□□□□□ -1.17
CCDC40-212ENST00000574799 SOX21Q9Y651 276 aaPredicted RBP7.77□□□□□ -1.17
CCDC40-212ENST00000574799 MEOX1P50221 254 aa7.76□□□□□ -1.17
CCDC40-212ENST00000574799 TMPRSS3P57727 454 aa7.76□□□□□ -1.17
CCDC40-212ENST00000574799 NRN1LQ496H8 165 aa7.76□□□□□ -1.17
CCDC40-212ENST00000574799 MORN5Q5VZ52 161 aa7.76□□□□□ -1.17
CCDC40-212ENST00000574799 HRNRQ86YZ3 2850 aaPredicted RBP7.76□□□□□ -1.17
CCDC40-212ENST00000574799 TRAV8-1A0A0A6YYK1 113 aa7.76□□□□□ -1.17
CCDC40-212ENST00000574799 NKX2-8O15522 239 aa7.76□□□□□ -1.17
CCDC40-212ENST00000574799 FCGR2BP31994 310 aaPredicted RBP7.76□□□□□ -1.17
CCDC40-212ENST00000574799 CRYBA4P53673 196 aa7.76□□□□□ -1.17
CCDC40-212ENST00000574799 IGFL2Q6UWQ7 119 aa7.76□□□□□ -1.17
CCDC40-212ENST00000574799 ACP7Q6ZNF0 438 aa7.76□□□□□ -1.17
CCDC40-212ENST00000574799 PRSS33Q8NF86 280 aa7.76□□□□□ -1.17
CCDC40-212ENST00000574799 CXXC4Q9H2H0 198 aa7.76□□□□□ -1.17
CCDC40-212ENST00000574799 C22orf46C9J442 243 aa7.76□□□□□ -1.17
CCDC40-212ENST00000574799 MPV17P39210 176 aa7.76□□□□□ -1.17
CCDC40-212ENST00000574799 C2orf91Q6ZV80 131 aa7.76□□□□□ -1.17
CCDC40-212ENST00000574799 GOLT1AQ6ZVE7 132 aa7.76□□□□□ -1.17
CCDC40-212ENST00000574799 SH2D6Q7Z4S9 175 aa7.76□□□□□ -1.17
CCDC40-212ENST00000574799 ZNF329Q86UD4 541 aa7.76□□□□□ -1.17
CCDC40-212ENST00000574799 PCP2Q8IVA1 136 aa7.76□□□□□ -1.17
CCDC40-212ENST00000574799 ZNRF1Q8ND25 227 aa7.76□□□□□ -1.17
CCDC40-212ENST00000574799 ZNF503Q96F45 646 aa7.76□□□□□ -1.17
CCDC40-212ENST00000574799 RAB9BQ9NP90 201 aa7.76□□□□□ -1.17
CCDC40-212ENST00000574799 TRGV8A0A0C4DH27 118 aa7.75□□□□□ -1.17
CCDC40-212ENST00000574799 LINC01545Q5VT33 79 aa7.75□□□□□ -1.17
CCDC40-212ENST00000574799 ZNF747Q9BV97 191 aa7.75□□□□□ -1.17
CCDC40-212ENST00000574799 JPT1Q9UK76 154 aa7.75□□□□□ -1.17
CCDC40-212ENST00000574799 ROS1P08922 2347 aa7.75□□□□□ -1.17
CCDC40-212ENST00000574799 FAM90A9PA6NNJ1 464 aa7.75□□□□□ -1.17
CCDC40-212ENST00000574799 NCR2O95944 276 aa7.75□□□□□ -1.17
CCDC40-212ENST00000574799 MC5RP33032 325 aa7.75□□□□□ -1.17
CCDC40-212ENST00000574799 IFI27P40305 119 aaPredicted RBP7.75□□□□□ -1.17
CCDC40-212ENST00000574799 PRR14LQ5THK1 2151 aa7.75□□□□□ -1.17
CCDC40-212ENST00000574799 INO80CQ6PI98 192 aaPredicted RBP7.75□□□□□ -1.17
CCDC40-212ENST00000574799 CIARTQ8N365 385 aaPredicted RBP7.75□□□□□ -1.17
CCDC40-212ENST00000574799 DEFB124Q8NES8 71 aa7.75□□□□□ -1.17
CCDC40-212ENST00000574799 STXBP6Q8NFX7 210 aa7.75□□□□□ -1.17
CCDC40-212ENST00000574799 ARPC1AQ92747 370 aa7.75□□□□□ -1.17
CCDC40-212ENST00000574799 URB1-AS1Q96HZ7 61 aa7.75□□□□□ -1.17
CCDC40-212ENST00000574799 ZNF479Q96JC4 524 aa7.75□□□□□ -1.17
CCDC40-212ENST00000574799 DEFB127Q9H1M4 99 aa7.75□□□□□ -1.17
CCDC40-212ENST00000574799 CRXO43186 299 aaPredicted RBP7.75□□□□□ -1.17
CCDC40-212ENST00000574799 WFDC2Q14508 124 aa7.75□□□□□ -1.17
CCDC40-212ENST00000574799 UFSP1Q6NVU6 142 aa7.75□□□□□ -1.17
CCDC40-212ENST00000574799 AMTNQ6UX39 209 aa7.75□□□□□ -1.17
CCDC40-212ENST00000574799 KLF14Q8TD94 323 aaPredicted RBP7.75□□□□□ -1.17
CCDC40-212ENST00000574799 HARBI1Q96MB7 349 aa7.75□□□□□ -1.17
CCDC40-212ENST00000574799 K7EMI3 77 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 ENSAO43768 121 aaKnown RBP7.74□□□□□ -1.17
CCDC40-212ENST00000574799 CD69Q07108 199 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 SFTA2Q6UW10 78 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 FDCSPQ8NFU4 85 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 Q8TCH9 128 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 ZNF48Q96MX3 618 aaPredicted RBP7.74□□□□□ -1.17
CCDC40-212ENST00000574799 VGLL1Q99990 258 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 CALYQ9NYX4 217 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 PLCE1Q9P212 2302 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 H3BMG7 143 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 DLL1O00548 723 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 SCGB1A1P11684 91 aa7.74□□□□□ -1.17
CCDC40-212ENST00000574799 APOBEC3AP31941 199 aaPredicted RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms