RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 ZNF546Q86UE3 836 aa12.45□□□□□ -0.42
CNEP1R1-210ENST00000568890 GBGT1Q8N5D6 347 aa12.45□□□□□ -0.42
CNEP1R1-210ENST00000568890 OR1B1Q8NGR6 318 aa12.45□□□□□ -0.42
CNEP1R1-210ENST00000568890 GLMPQ8WWB7 406 aa12.45□□□□□ -0.42
CNEP1R1-210ENST00000568890 AQP10Q96PS8 301 aa12.45□□□□□ -0.42
CNEP1R1-210ENST00000568890 UHRF2Q96PU4 802 aa12.45□□□□□ -0.42
CNEP1R1-210ENST00000568890 FABP1P07148 127 aa12.45□□□□□ -0.42
CNEP1R1-210ENST00000568890 FGF7P21781 194 aa12.45□□□□□ -0.42
CNEP1R1-210ENST00000568890 EIF2B2P49770 351 aaKnown RBP12.45□□□□□ -0.42
CNEP1R1-210ENST00000568890 SELENOTP62341 195 aa12.45□□□□□ -0.42
CNEP1R1-210ENST00000568890 TMEM37Q8WXS4 190 aa12.45□□□□□ -0.42
CNEP1R1-210ENST00000568890 C19orf73Q9NVV2 129 aa12.45□□□□□ -0.42
CNEP1R1-210ENST00000568890 TNFSF18Q9UNG2 199 aa12.45□□□□□ -0.42
CNEP1R1-210ENST00000568890 FXYD6-FXYD2A0A087WZ82 144 aa12.44□□□□□ -0.42
CNEP1R1-210ENST00000568890 TRAV25A0A0B4J276 109 aa12.44□□□□□ -0.42
CNEP1R1-210ENST00000568890 LEMD1Q68G75 181 aa12.44□□□□□ -0.42
CNEP1R1-210ENST00000568890 C17orf77Q96MU5 243 aa12.44□□□□□ -0.42
CNEP1R1-210ENST00000568890 WDR61Q9GZS3 305 aaKnown RBP12.44□□□□□ -0.42
CNEP1R1-210ENST00000568890 ARL6Q9H0F7 186 aa12.44□□□□□ -0.42
CNEP1R1-210ENST00000568890 WFDC10AQ9H1F0 79 aa12.44□□□□□ -0.42
CNEP1R1-210ENST00000568890 ATP5SQ99766 215 aa12.43□□□□□ -0.42
CNEP1R1-210ENST00000568890 NPCDR1Q9BY65 106 aa12.43□□□□□ -0.42
CNEP1R1-210ENST00000568890 ZMAT5Q9UDW3 170 aaKnown RBP12.43□□□□□ -0.42
CNEP1R1-210ENST00000568890 A0A1W2PS18 150 aa12.43□□□□□ -0.42
CNEP1R1-210ENST00000568890 CFDP00746 253 aaPredicted RBP12.43□□□□□ -0.42
CNEP1R1-210ENST00000568890 RPL29P47914 159 aaKnown RBP12.43□□□□□ -0.42
CNEP1R1-210ENST00000568890 TFPI2P48307 235 aa12.43□□□□□ -0.42
CNEP1R1-210ENST00000568890 CD300CQ08708 224 aa12.43□□□□□ -0.42
CNEP1R1-210ENST00000568890 MORN5Q5VZ52 161 aa12.43□□□□□ -0.42
CNEP1R1-210ENST00000568890 NEURL2Q9BR09 285 aa12.43□□□□□ -0.42
CNEP1R1-210ENST00000568890 MS4A6AQ9H2W1 248 aa12.43□□□□□ -0.42
CNEP1R1-210ENST00000568890 FBXL17Q9UF56 701 aa12.43□□□□□ -0.42
CNEP1R1-210ENST00000568890 TGP01266 2768 aa12.42□□□□□ -0.42
CNEP1R1-210ENST00000568890 ZNF98A6NK75 572 aa12.42□□□□□ -0.42
CNEP1R1-210ENST00000568890 AP2S1P53680 142 aaPredicted RBP12.42□□□□□ -0.42
CNEP1R1-210ENST00000568890 OPCMLQ14982 345 aa12.42□□□□□ -0.42
CNEP1R1-210ENST00000568890 DEFB121Q5J5C9 76 aa12.42□□□□□ -0.42
CNEP1R1-210ENST00000568890 GCSAMLQ5JQS6 135 aa12.42□□□□□ -0.42
CNEP1R1-210ENST00000568890 LAMTOR1Q6IAA8 161 aa12.42□□□□□ -0.42
CNEP1R1-210ENST00000568890 FAM24BQ8N5W8 94 aa12.42□□□□□ -0.42
CNEP1R1-210ENST00000568890 RSG1Q9BU20 258 aa12.42□□□□□ -0.42
CNEP1R1-210ENST00000568890 SCRT1Q9BWW7 348 aa12.42□□□□□ -0.42
CNEP1R1-210ENST00000568890 SLC25A39Q9BZJ4 359 aaPredicted RBP12.42□□□□□ -0.42
CNEP1R1-210ENST00000568890 HYPMO75409 117 aa12.41□□□□□ -0.42
CNEP1R1-210ENST00000568890 OR5G3P0C626 314 aa12.41□□□□□ -0.42
CNEP1R1-210ENST00000568890 RPL11P62913 178 aaKnown RBP12.41□□□□□ -0.42
CNEP1R1-210ENST00000568890 WFDC3Q8IUB2 231 aa12.41□□□□□ -0.42
CNEP1R1-210ENST00000568890 MRAPQ8TCY5 172 aa12.41□□□□□ -0.42
CNEP1R1-210ENST00000568890 SPAG8Q99932 426 aaPredicted RBP12.41□□□□□ -0.42
CNEP1R1-210ENST00000568890 ARV1Q9H2C2 271 aa12.41□□□□□ -0.42
CNEP1R1-210ENST00000568890 SMAD5-AS1Q9Y6J3 95 aa12.41□□□□□ -0.42
CNEP1R1-210ENST00000568890 RAB31Q13636 194 aa12.41□□□□□ -0.42
CNEP1R1-210ENST00000568890 DCANP1Q8TF63 244 aa12.41□□□□□ -0.42
CNEP1R1-210ENST00000568890 SLC39A9Q9NUM3 307 aa12.41□□□□□ -0.42
CNEP1R1-210ENST00000568890 PXMP4Q9Y6I8 212 aa12.41□□□□□ -0.42
CNEP1R1-210ENST00000568890 ARPC5O15511 151 aa12.4□□□□□ -0.42
CNEP1R1-210ENST00000568890 CD81P60033 236 aa12.4□□□□□ -0.42
CNEP1R1-210ENST00000568890 B2MP61769 119 aa12.4□□□□□ -0.42
CNEP1R1-210ENST00000568890 CITED4Q96RK1 184 aa12.4□□□□□ -0.42
CNEP1R1-210ENST00000568890 SLC25A22Q9H936 323 aa12.4□□□□□ -0.42
CNEP1R1-210ENST00000568890 COL7A1Q02388 2944 aa12.4□□□□□ -0.43
CNEP1R1-210ENST00000568890 NBEAL2Q6ZNJ1 2754 aa12.4□□□□□ -0.43
CNEP1R1-210ENST00000568890 H3BRN7 92 aa12.39□□□□□ -0.43
CNEP1R1-210ENST00000568890 MPDU1O75352 247 aa12.39□□□□□ -0.43
CNEP1R1-210ENST00000568890 ODF3L2Q3SX64 289 aa12.39□□□□□ -0.43
CNEP1R1-210ENST00000568890 SIGLEC15Q6ZMC9 328 aa12.39□□□□□ -0.43
CNEP1R1-210ENST00000568890 DEFB125Q8N687 156 aa12.39□□□□□ -0.43
CNEP1R1-210ENST00000568890 INO80EQ8NBZ0 244 aaPredicted RBP12.39□□□□□ -0.43
CNEP1R1-210ENST00000568890 SHANK2-AS3Q9BTD1 123 aa12.39□□□□□ -0.43
CNEP1R1-210ENST00000568890 TMEM231Q9H6L2 316 aa12.39□□□□□ -0.43
CNEP1R1-210ENST00000568890 DNAJC4Q9NNZ3 241 aa12.39□□□□□ -0.43
CNEP1R1-210ENST00000568890 UBQLN2Q9UHD9 624 aa12.39□□□□□ -0.43
CNEP1R1-210ENST00000568890 HIGD1AQ9Y241 93 aa12.39□□□□□ -0.43
CNEP1R1-210ENST00000568890 ZNF124Q15973 351 aa12.39□□□□□ -0.43
CNEP1R1-210ENST00000568890 STXBP6Q8NFX7 210 aa12.39□□□□□ -0.43
CNEP1R1-210ENST00000568890 NARS2Q96I59 477 aaKnown RBP12.39□□□□□ -0.43
CNEP1R1-210ENST00000568890 TRAV5A0A0B4J249 113 aa12.38□□□□□ -0.43
CNEP1R1-210ENST00000568890 IGHV4-30-4P0DP06 118 aa12.38□□□□□ -0.43
CNEP1R1-210ENST00000568890 BMI1P35226 326 aa12.38□□□□□ -0.43
CNEP1R1-210ENST00000568890 C1orf194Q5T5A4 169 aa12.38□□□□□ -0.43
CNEP1R1-210ENST00000568890 LINC00305Q7Z4B0 112 aa12.38□□□□□ -0.43
CNEP1R1-210ENST00000568890 GTSCR1Q86UQ5 136 aa12.38□□□□□ -0.43
CNEP1R1-210ENST00000568890 OR8I2Q8N0Y5 310 aa12.38□□□□□ -0.43
CNEP1R1-210ENST00000568890 PPP1R14BQ96C90 147 aa12.38□□□□□ -0.43
CNEP1R1-210ENST00000568890 GRAMD2BQ96HH9 432 aa12.38□□□□□ -0.43
CNEP1R1-210ENST00000568890 SLC25A32Q9H2D1 315 aa12.38□□□□□ -0.43
CNEP1R1-210ENST00000568890 OR11H12B2RN74 326 aa12.38□□□□□ -0.43
CNEP1R1-210ENST00000568890 K7EQG2 157 aa12.38□□□□□ -0.43
CNEP1R1-210ENST00000568890 CD5P06127 495 aa12.38□□□□□ -0.43
CNEP1R1-210ENST00000568890 Q6ZRG5 221 aa12.38□□□□□ -0.43
CNEP1R1-210ENST00000568890 MFFQ9GZY8 342 aa12.38□□□□□ -0.43
CNEP1R1-210ENST00000568890 SEPSECSQ9HD40 501 aaKnown RBP12.38□□□□□ -0.43
CNEP1R1-210ENST00000568890 MRPS12O15235 138 aaKnown RBP12.37□□□□□ -0.43
CNEP1R1-210ENST00000568890 SNRPCP09234 159 aaKnown RBP12.37□□□□□ -0.43
CNEP1R1-210ENST00000568890 CXCL2P19875 107 aa12.37□□□□□ -0.43
CNEP1R1-210ENST00000568890 RPL7L1Q6DKI1 246 aaKnown RBP12.37□□□□□ -0.43
CNEP1R1-210ENST00000568890 PARD6GQ9BYG4 376 aaPredicted RBP12.37□□□□□ -0.43
CNEP1R1-210ENST00000568890 CYTL1Q9NRR1 136 aa12.37□□□□□ -0.43
CNEP1R1-210ENST00000568890 ELOA3CA0A087WX78 387 aaPredicted RBP12.36□□□□□ -0.43
CNEP1R1-210ENST00000568890 OR4C46A6NHA9 309 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms