RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 PRR20DP86480 221 aa12.63□□□□□ -0.39
COMMD4-224ENST00000568877 PRR20BP86481 221 aa12.63□□□□□ -0.39
COMMD4-224ENST00000568877 PRR20AP86496 221 aa12.63□□□□□ -0.39
COMMD4-224ENST00000568877 PXDC1Q5TGL8 231 aa12.63□□□□□ -0.39
COMMD4-224ENST00000568877 STPG3Q8N7X2 389 aa12.63□□□□□ -0.39
COMMD4-224ENST00000568877 GRAMD2BQ96HH9 432 aa12.63□□□□□ -0.39
COMMD4-224ENST00000568877 NEURL2Q9BR09 285 aa12.63□□□□□ -0.39
COMMD4-224ENST00000568877 PARD6GQ9BYG4 376 aaPredicted RBP12.63□□□□□ -0.39
COMMD4-224ENST00000568877 ARL6Q9H0F7 186 aa12.63□□□□□ -0.39
COMMD4-224ENST00000568877 DOK5Q9P104 306 aa12.63□□□□□ -0.39
COMMD4-224ENST00000568877 MGAM2Q2M2H8 2515 aa12.63□□□□□ -0.39
COMMD4-224ENST00000568877 TRAV25A0A0B4J276 109 aa12.62□□□□□ -0.39
COMMD4-224ENST00000568877 BUB3O43684 328 aa12.62□□□□□ -0.39
COMMD4-224ENST00000568877 OR5G3P0C626 314 aa12.62□□□□□ -0.39
COMMD4-224ENST00000568877 B2MP61769 119 aa12.62□□□□□ -0.39
COMMD4-224ENST00000568877 ZNF266Q14584 549 aa12.62□□□□□ -0.39
COMMD4-224ENST00000568877 LAMTOR1Q6IAA8 161 aa12.62□□□□□ -0.39
COMMD4-224ENST00000568877 Q6ZRG5 221 aa12.62□□□□□ -0.39
COMMD4-224ENST00000568877 RBPMS2Q6ZRY4 209 aaKnown RBP12.62□□□□□ -0.39
COMMD4-224ENST00000568877 TMEM61Q8N0U2 210 aa12.62□□□□□ -0.39
COMMD4-224ENST00000568877 ZNF709Q8N972 641 aa12.62□□□□□ -0.39
COMMD4-224ENST00000568877 PPP1R14BQ96C90 147 aa12.62□□□□□ -0.39
COMMD4-224ENST00000568877 PXMP4Q9Y6I8 212 aa12.62□□□□□ -0.39
COMMD4-224ENST00000568877 C17orf112F2Z3M2 114 aa12.61□□□□□ -0.39
COMMD4-224ENST00000568877 C1QBP02746 253 aa12.61□□□□□ -0.39
COMMD4-224ENST00000568877 CD5P06127 495 aa12.61□□□□□ -0.39
COMMD4-224ENST00000568877 S100A7P31151 101 aa12.61□□□□□ -0.39
COMMD4-224ENST00000568877 ZNF345Q14585 488 aa12.61□□□□□ -0.39
COMMD4-224ENST00000568877 FAM90A2PQ658T7 463 aa12.61□□□□□ -0.39
COMMD4-224ENST00000568877 C16orf54Q6UWD8 224 aa12.61□□□□□ -0.39
COMMD4-224ENST00000568877 TCF24Q7RTU0 167 aa12.61□□□□□ -0.39
COMMD4-224ENST00000568877 KCNIP2Q9NS61 270 aa12.61□□□□□ -0.39
COMMD4-224ENST00000568877 SLC39A9Q9NUM3 307 aa12.61□□□□□ -0.39
COMMD4-224ENST00000568877 HIGD1AQ9Y241 93 aa12.61□□□□□ -0.39
COMMD4-224ENST00000568877 ZNF256Q9Y2P7 627 aaPredicted RBP12.61□□□□□ -0.39
COMMD4-224ENST00000568877 NOTCH3Q9UM47 2321 aa12.6□□□□□ -0.39
COMMD4-224ENST00000568877 ELOA3CA0A087WX78 387 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-224ENST00000568877 ZNF785A8K8V0 405 aa12.6□□□□□ -0.39
COMMD4-224ENST00000568877 TAAR5O14804 337 aa12.6□□□□□ -0.39
COMMD4-224ENST00000568877 CD300CQ08708 224 aa12.6□□□□□ -0.39
COMMD4-224ENST00000568877 PATE2Q6UY27 113 aa12.6□□□□□ -0.39
COMMD4-224ENST00000568877 KCNRGQ8N5I3 272 aa12.6□□□□□ -0.39
COMMD4-224ENST00000568877 GLMPQ8WWB7 406 aa12.6□□□□□ -0.39
COMMD4-224ENST00000568877 ARV1Q9H2C2 271 aa12.6□□□□□ -0.39
COMMD4-224ENST00000568877 A0A0D9SG52 128 aa12.59□□□□□ -0.39
COMMD4-224ENST00000568877 ZNF98A6NK75 572 aa12.59□□□□□ -0.39
COMMD4-224ENST00000568877 TSPAN4O14817 238 aa12.59□□□□□ -0.39
COMMD4-224ENST00000568877 COX7A2P2O60397 106 aa12.59□□□□□ -0.39
COMMD4-224ENST00000568877 GP9P14770 177 aa12.59□□□□□ -0.39
COMMD4-224ENST00000568877 CXCL2P19875 107 aa12.59□□□□□ -0.39
COMMD4-224ENST00000568877 GUCA2BQ16661 112 aa12.59□□□□□ -0.39
COMMD4-224ENST00000568877 C1orf194Q5T5A4 169 aa12.59□□□□□ -0.39
COMMD4-224ENST00000568877 S100A7AQ86SG5 101 aa12.59□□□□□ -0.39
COMMD4-224ENST00000568877 OR1L4Q8NGR5 311 aa12.59□□□□□ -0.39
COMMD4-224ENST00000568877 TMEM37Q8WXS4 190 aa12.59□□□□□ -0.39
COMMD4-224ENST00000568877 RSG1Q9BU20 258 aa12.59□□□□□ -0.39
COMMD4-224ENST00000568877 SLC25A39Q9BZJ4 359 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-224ENST00000568877 DNAJC4Q9NNZ3 241 aa12.59□□□□□ -0.39
COMMD4-224ENST00000568877 BORCS7-ASMTA0A0B4J1R7 106 aa12.58□□□□□ -0.4
COMMD4-224ENST00000568877 HELTA6NFD8 242 aa12.58□□□□□ -0.4
COMMD4-224ENST00000568877 H3BRN7 92 aa12.58□□□□□ -0.4
COMMD4-224ENST00000568877 RPL11P62913 178 aaKnown RBP12.58□□□□□ -0.4
COMMD4-224ENST00000568877 C10orf113Q5VZT2 155 aa12.58□□□□□ -0.4
COMMD4-224ENST00000568877 RPL7L1Q6DKI1 246 aaKnown RBP12.58□□□□□ -0.4
COMMD4-224ENST00000568877 HYLS1Q96M11 299 aa12.58□□□□□ -0.4
COMMD4-224ENST00000568877 UHRF2Q96PU4 802 aa12.58□□□□□ -0.4
COMMD4-224ENST00000568877 PFDN5Q99471 154 aa12.58□□□□□ -0.4
COMMD4-224ENST00000568877 SPAG8Q99932 426 aaPredicted RBP12.58□□□□□ -0.4
COMMD4-224ENST00000568877 ARPC5LQ9BPX5 153 aa12.58□□□□□ -0.4
COMMD4-224ENST00000568877 SHANK2-AS3Q9BTD1 123 aa12.58□□□□□ -0.4
COMMD4-224ENST00000568877 DNAH3Q8TD57 4116 aa12.58□□□□□ -0.4
COMMD4-224ENST00000568877 IGKV3-7A0A075B6H7 116 aa12.57□□□□□ -0.4
COMMD4-224ENST00000568877 SIGLEC15Q6ZMC9 328 aa12.57□□□□□ -0.4
COMMD4-224ENST00000568877 LINC00305Q7Z4B0 112 aa12.57□□□□□ -0.4
COMMD4-224ENST00000568877 OR8I2Q8N0Y5 310 aa12.57□□□□□ -0.4
COMMD4-224ENST00000568877 HSD17B11Q8NBQ5 300 aa12.57□□□□□ -0.4
COMMD4-224ENST00000568877 GATAD1Q8WUU5 269 aa12.57□□□□□ -0.4
COMMD4-224ENST00000568877 PRR25Q96S07 402 aa12.57□□□□□ -0.4
COMMD4-224ENST00000568877 SCRT1Q9BWW7 348 aa12.57□□□□□ -0.4
COMMD4-224ENST00000568877 SLC25A22Q9H936 323 aa12.57□□□□□ -0.4
COMMD4-224ENST00000568877 CYTL1Q9NRR1 136 aa12.57□□□□□ -0.4
COMMD4-224ENST00000568877 TIMM9Q9Y5J7 89 aa12.57□□□□□ -0.4
COMMD4-224ENST00000568877 JTBO76095 146 aa12.56□□□□□ -0.4
COMMD4-224ENST00000568877 PRB2P02812 416 aaPredicted RBP12.56□□□□□ -0.4
COMMD4-224ENST00000568877 ATP6V0CP27449 155 aa12.56□□□□□ -0.4
COMMD4-224ENST00000568877 PAFAH1B2P68402 229 aa12.56□□□□□ -0.4
COMMD4-224ENST00000568877 GCSAMLQ5JQS6 135 aa12.56□□□□□ -0.4
COMMD4-224ENST00000568877 LEMD1Q68G75 181 aa12.56□□□□□ -0.4
COMMD4-224ENST00000568877 AURKAIP1Q9NWT8 199 aaPredicted RBP12.56□□□□□ -0.4
COMMD4-224ENST00000568877 RNF24Q9Y225 148 aa12.56□□□□□ -0.4
COMMD4-224ENST00000568877 RFNGQ9Y644 331 aa12.56□□□□□ -0.4
COMMD4-224ENST00000568877 KANTRA0A1W2PQU2 76 aa12.55□□□□□ -0.4
COMMD4-224ENST00000568877 BCL2L11O43521 198 aa12.55□□□□□ -0.4
COMMD4-224ENST00000568877 LGALSLQ3ZCW2 172 aaPredicted RBP12.55□□□□□ -0.4
COMMD4-224ENST00000568877 ZFP69Q49AA0 526 aa12.55□□□□□ -0.4
COMMD4-224ENST00000568877 FFAR4Q5NUL3 377 aa12.55□□□□□ -0.4
COMMD4-224ENST00000568877 TMUB2Q71RG4 321 aa12.55□□□□□ -0.4
COMMD4-224ENST00000568877 GBGT1Q8N5D6 347 aa12.55□□□□□ -0.4
COMMD4-224ENST00000568877 SLC25A32Q9H2D1 315 aa12.55□□□□□ -0.4
COMMD4-224ENST00000568877 MS4A6AQ9H2W1 248 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms