RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 NHLH2Q02577 135 aa9.17□□□□□ -0.94
SF3B3-208ENST00000567250 CLINT1Q14677 625 aa9.17□□□□□ -0.94
SF3B3-208ENST00000567250 TCF24Q7RTU0 167 aa9.17□□□□□ -0.94
SF3B3-208ENST00000567250 RNF2Q99496 336 aa9.17□□□□□ -0.94
SF3B3-208ENST00000567250 ATP5SQ99766 215 aa9.17□□□□□ -0.94
SF3B3-208ENST00000567250 FBXL17Q9UF56 701 aa9.17□□□□□ -0.94
SF3B3-208ENST00000567250 PRB2P02812 416 aaPredicted RBP9.16□□□□□ -0.94
SF3B3-208ENST00000567250 ORM2P19652 201 aa9.16□□□□□ -0.94
SF3B3-208ENST00000567250 CD81P60033 236 aa9.16□□□□□ -0.94
SF3B3-208ENST00000567250 PLP1P60201 277 aa9.16□□□□□ -0.94
SF3B3-208ENST00000567250 RPL11P62913 178 aaKnown RBP9.16□□□□□ -0.94
SF3B3-208ENST00000567250 C1orf194Q5T5A4 169 aa9.16□□□□□ -0.94
SF3B3-208ENST00000567250 Q6ZRG5 221 aa9.16□□□□□ -0.94
SF3B3-208ENST00000567250 INO80EQ8NBZ0 244 aaPredicted RBP9.16□□□□□ -0.94
SF3B3-208ENST00000567250 OR1B1Q8NGR6 318 aa9.16□□□□□ -0.94
SF3B3-208ENST00000567250 MGST2Q99735 147 aa9.16□□□□□ -0.94
SF3B3-208ENST00000567250 GGTLC1Q9BX51 225 aa9.16□□□□□ -0.94
SF3B3-208ENST00000567250 SMAD5-AS1Q9Y6J3 95 aa9.16□□□□□ -0.94
SF3B3-208ENST00000567250 U3KQE9 123 aa9.16□□□□□ -0.94
SF3B3-208ENST00000567250 FXYD6-FXYD2A0A087WZ82 144 aa9.15□□□□□ -0.94
SF3B3-208ENST00000567250 TRAV2A0A0B4J234 112 aa9.15□□□□□ -0.94
SF3B3-208ENST00000567250 IGHV3-66A0A0C4DH42 116 aa9.15□□□□□ -0.94
SF3B3-208ENST00000567250 C17orf112F2Z3M2 114 aa9.15□□□□□ -0.94
SF3B3-208ENST00000567250 K7EIL1 84 aa9.15□□□□□ -0.94
SF3B3-208ENST00000567250 BUB3O43684 328 aa9.15□□□□□ -0.94
SF3B3-208ENST00000567250 HYPMO75409 117 aa9.15□□□□□ -0.94
SF3B3-208ENST00000567250 IFNA5P01569 189 aa9.15□□□□□ -0.94
SF3B3-208ENST00000567250 APOHP02749 345 aaPredicted RBP9.15□□□□□ -0.94
SF3B3-208ENST00000567250 GATA2P23769 480 aaPredicted RBP9.15□□□□□ -0.94
SF3B3-208ENST00000567250 ZNF266Q14584 549 aa9.15□□□□□ -0.94
SF3B3-208ENST00000567250 C16orf54Q6UWD8 224 aa9.15□□□□□ -0.94
SF3B3-208ENST00000567250 SIGLEC15Q6ZMC9 328 aa9.15□□□□□ -0.94
SF3B3-208ENST00000567250 ZNF709Q8N972 641 aa9.15□□□□□ -0.94
SF3B3-208ENST00000567250 GPR82Q96P67 336 aa9.15□□□□□ -0.94
SF3B3-208ENST00000567250 AQP10Q96PS8 301 aa9.15□□□□□ -0.94
SF3B3-208ENST00000567250 PFDN5Q99471 154 aa9.15□□□□□ -0.94
SF3B3-208ENST00000567250 ARL6Q9H0F7 186 aa9.15□□□□□ -0.94
SF3B3-208ENST00000567250 HIGD1AQ9Y241 93 aa9.15□□□□□ -0.94
SF3B3-208ENST00000567250 ELOA3CA0A087WX78 387 aaPredicted RBP9.14□□□□□ -0.95
SF3B3-208ENST00000567250 ZNF785A8K8V0 405 aa9.14□□□□□ -0.95
SF3B3-208ENST00000567250 DNASE2O00115 360 aaPredicted RBP9.14□□□□□ -0.95
SF3B3-208ENST00000567250 COX7A2P2O60397 106 aa9.14□□□□□ -0.95
SF3B3-208ENST00000567250 OR5G3P0C626 314 aa9.14□□□□□ -0.95
SF3B3-208ENST00000567250 RPL29P47914 159 aaKnown RBP9.14□□□□□ -0.95
SF3B3-208ENST00000567250 CMC4P56277 68 aaPredicted RBP9.14□□□□□ -0.95
SF3B3-208ENST00000567250 OPCMLQ14982 345 aa9.14□□□□□ -0.95
SF3B3-208ENST00000567250 FAM90A2PQ658T7 463 aa9.14□□□□□ -0.95
SF3B3-208ENST00000567250 Q6ZNX1 250 aa9.14□□□□□ -0.95
SF3B3-208ENST00000567250 STPG3Q8N7X2 389 aa9.14□□□□□ -0.95
SF3B3-208ENST00000567250 OR1L4Q8NGR5 311 aa9.14□□□□□ -0.95
SF3B3-208ENST00000567250 CHAC2Q8WUX2 184 aa9.14□□□□□ -0.95
SF3B3-208ENST00000567250 GLMPQ8WWB7 406 aa9.14□□□□□ -0.95
SF3B3-208ENST00000567250 NEURL2Q9BR09 285 aa9.14□□□□□ -0.95
SF3B3-208ENST00000567250 NPCDR1Q9BY65 106 aa9.14□□□□□ -0.95
SF3B3-208ENST00000567250 WDR61Q9GZS3 305 aaKnown RBP9.14□□□□□ -0.95
SF3B3-208ENST00000567250 DOK5Q9P104 306 aa9.14□□□□□ -0.95
SF3B3-208ENST00000567250 SELENOKQ9Y6D0 94 aa9.14□□□□□ -0.95
SF3B3-208ENST00000567250 IGKV3-7A0A075B6H7 116 aa9.13□□□□□ -0.95
SF3B3-208ENST00000567250 H3BRN7 92 aa9.13□□□□□ -0.95
SF3B3-208ENST00000567250 B2MP61769 119 aa9.13□□□□□ -0.95
SF3B3-208ENST00000567250 DEFB121Q5J5C9 76 aa9.13□□□□□ -0.95
SF3B3-208ENST00000567250 TMEM182Q6ZP80 229 aaPredicted RBP9.13□□□□□ -0.95
SF3B3-208ENST00000567250 OR8I2Q8N0Y5 310 aa9.13□□□□□ -0.95
SF3B3-208ENST00000567250 STXBP6Q8NFX7 210 aa9.13□□□□□ -0.95
SF3B3-208ENST00000567250 SCGB1C1Q8TD33 95 aa9.13□□□□□ -0.95
SF3B3-208ENST00000567250 FAM110AQ9BQ89 295 aa9.13□□□□□ -0.95
SF3B3-208ENST00000567250 PARD6GQ9BYG4 376 aaPredicted RBP9.13□□□□□ -0.95
SF3B3-208ENST00000567250 SLC25A39Q9BZJ4 359 aaPredicted RBP9.13□□□□□ -0.95
SF3B3-208ENST00000567250 SMIM3Q9BZL3 60 aa9.13□□□□□ -0.95
SF3B3-208ENST00000567250 ARV1Q9H2C2 271 aa9.13□□□□□ -0.95
SF3B3-208ENST00000567250 SLC25A22Q9H936 323 aa9.13□□□□□ -0.95
SF3B3-208ENST00000567250 PXMP4Q9Y6I8 212 aa9.13□□□□□ -0.95
SF3B3-208ENST00000567250 ZNF98A6NK75 572 aa9.12□□□□□ -0.95
SF3B3-208ENST00000567250 GALR1P47211 349 aa9.12□□□□□ -0.95
SF3B3-208ENST00000567250 SAMD13Q5VXD3 122 aa9.12□□□□□ -0.95
SF3B3-208ENST00000567250 MIC13Q5XKP0 118 aa9.12□□□□□ -0.95
SF3B3-208ENST00000567250 GBGT1Q8N5D6 347 aa9.12□□□□□ -0.95
SF3B3-208ENST00000567250 MS4A6AQ9H2W1 248 aa9.12□□□□□ -0.95
SF3B3-208ENST00000567250 NRN1Q9NPD7 142 aa9.12□□□□□ -0.95
SF3B3-208ENST00000567250 SLC39A9Q9NUM3 307 aa9.12□□□□□ -0.95
SF3B3-208ENST00000567250 TNFSF18Q9UNG2 199 aa9.12□□□□□ -0.95
SF3B3-208ENST00000567250 DNAH3Q8TD57 4116 aa9.11□□□□□ -0.95
SF3B3-208ENST00000567250 A8MZ25 164 aa9.11□□□□□ -0.95
SF3B3-208ENST00000567250 OR11H12B2RN74 326 aa9.11□□□□□ -0.95
SF3B3-208ENST00000567250 ARPC5O15511 151 aa9.11□□□□□ -0.95
SF3B3-208ENST00000567250 CD7P09564 240 aa9.11□□□□□ -0.95
SF3B3-208ENST00000567250 RPL7P18124 248 aaKnown RBP9.11□□□□□ -0.95
SF3B3-208ENST00000567250 TFPI2P48307 235 aa9.11□□□□□ -0.95
SF3B3-208ENST00000567250 SMCPP49901 116 aaPredicted RBP9.11□□□□□ -0.95
SF3B3-208ENST00000567250 MEOX2P50222 304 aa9.11□□□□□ -0.95
SF3B3-208ENST00000567250 Q5BKY6 102 aa9.11□□□□□ -0.95
SF3B3-208ENST00000567250 C10orf113Q5VZT2 155 aa9.11□□□□□ -0.95
SF3B3-208ENST00000567250 SHANK2-AS3Q9BTD1 123 aa9.11□□□□□ -0.95
SF3B3-208ENST00000567250 RNF222A6NCQ9 220 aa9.1□□□□□ -0.95
SF3B3-208ENST00000567250 G3V3Q6 166 aa9.1□□□□□ -0.95
SF3B3-208ENST00000567250 IGHV4-30-4P0DP06 118 aa9.1□□□□□ -0.95
SF3B3-208ENST00000567250 SNRPD3P62318 126 aaKnown RBP9.1□□□□□ -0.95
SF3B3-208ENST00000567250 ZNF345Q14585 488 aa9.1□□□□□ -0.95
SF3B3-208ENST00000567250 LINC00305Q7Z4B0 112 aa9.1□□□□□ -0.95
SF3B3-208ENST00000567250 Q8N1Y9 231 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms