RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 BPIFCQ8NFQ6 507 aa10.28□□□□□ -0.76
HERPUD1-210ENST00000565966 GLMPQ8WWB7 406 aa10.28□□□□□ -0.76
HERPUD1-210ENST00000565966 CITED4Q96RK1 184 aa10.28□□□□□ -0.76
HERPUD1-210ENST00000565966 RNF126Q9BV68 326 aa10.28□□□□□ -0.76
HERPUD1-210ENST00000565966 MS4A6AQ9H2W1 248 aa10.28□□□□□ -0.76
HERPUD1-210ENST00000565966 AGRNO00468 2067 aa10.27□□□□□ -0.76
HERPUD1-210ENST00000565966 TRAV2A0A0B4J234 112 aa10.27□□□□□ -0.77
HERPUD1-210ENST00000565966 MPC2O95563 127 aa10.27□□□□□ -0.77
HERPUD1-210ENST00000565966 S100A11P31949 105 aa10.27□□□□□ -0.77
HERPUD1-210ENST00000565966 SELENOTP62341 195 aa10.27□□□□□ -0.77
HERPUD1-210ENST00000565966 STX12Q86Y82 276 aa10.27□□□□□ -0.77
HERPUD1-210ENST00000565966 WFDC3Q8IUB2 231 aa10.27□□□□□ -0.77
HERPUD1-210ENST00000565966 OR11H7Q8NGC8 314 aa10.27□□□□□ -0.77
HERPUD1-210ENST00000565966 GGTLC1Q9BX51 225 aa10.27□□□□□ -0.77
HERPUD1-210ENST00000565966 MED28Q9H204 178 aa10.27□□□□□ -0.77
HERPUD1-210ENST00000565966 NUP62P37198 522 aaPredicted RBP10.26□□□□□ -0.77
HERPUD1-210ENST00000565966 AP2S1P53680 142 aaPredicted RBP10.26□□□□□ -0.77
HERPUD1-210ENST00000565966 HBG1P69891 147 aa10.26□□□□□ -0.77
HERPUD1-210ENST00000565966 HBG2P69892 147 aa10.26□□□□□ -0.77
HERPUD1-210ENST00000565966 EWSR1Q01844 656 aaKnown RBP eCLIP10.26□□□□□ -0.77
HERPUD1-210ENST00000565966 NHLH2Q02577 135 aa10.26□□□□□ -0.77
HERPUD1-210ENST00000565966 VWC2Q2TAL6 325 aa10.26□□□□□ -0.77
HERPUD1-210ENST00000565966 TMEM147Q9BVK8 224 aa10.26□□□□□ -0.77
HERPUD1-210ENST00000565966 SLC25A31Q9H0C2 315 aa10.26□□□□□ -0.77
HERPUD1-210ENST00000565966 UQCC1Q9NVA1 299 aa10.26□□□□□ -0.77
HERPUD1-210ENST00000565966 PFDN2Q9UHV9 154 aa10.26□□□□□ -0.77
HERPUD1-210ENST00000565966 HELTA6NFD8 242 aa10.25□□□□□ -0.77
HERPUD1-210ENST00000565966 K7EQG2 157 aa10.25□□□□□ -0.77
HERPUD1-210ENST00000565966 AGPAT2O15120 278 aa10.25□□□□□ -0.77
HERPUD1-210ENST00000565966 LINC00869P0C866 280 aa10.25□□□□□ -0.77
HERPUD1-210ENST00000565966 PET100P0DJ07 73 aa10.25□□□□□ -0.77
HERPUD1-210ENST00000565966 ORM2P19652 201 aa10.25□□□□□ -0.77
HERPUD1-210ENST00000565966 PLP1P60201 277 aa10.25□□□□□ -0.77
HERPUD1-210ENST00000565966 ATP6V1FQ16864 119 aa10.25□□□□□ -0.77
HERPUD1-210ENST00000565966 STXBP6Q8NFX7 210 aa10.25□□□□□ -0.77
HERPUD1-210ENST00000565966 OR1B1Q8NGR6 318 aa10.25□□□□□ -0.77
HERPUD1-210ENST00000565966 MGST2Q99735 147 aa10.25□□□□□ -0.77
HERPUD1-210ENST00000565966 SLC45A2Q9UMX9 530 aa10.25□□□□□ -0.77
HERPUD1-210ENST00000565966 WDR83OSQ9Y284 106 aa10.25□□□□□ -0.77
HERPUD1-210ENST00000565966 APOC4P55056 127 aa10.24□□□□□ -0.77
HERPUD1-210ENST00000565966 C1orf194Q5T5A4 169 aa10.24□□□□□ -0.77
HERPUD1-210ENST00000565966 SIGLEC15Q6ZMC9 328 aa10.24□□□□□ -0.77
HERPUD1-210ENST00000565966 ZNF546Q86UE3 836 aa10.24□□□□□ -0.77
HERPUD1-210ENST00000565966 APRG1Q8IVJ8 170 aa10.24□□□□□ -0.77
HERPUD1-210ENST00000565966 FAM24BQ8N5W8 94 aa10.24□□□□□ -0.77
HERPUD1-210ENST00000565966 DCANP1Q8TF63 244 aa10.24□□□□□ -0.77
HERPUD1-210ENST00000565966 PPP1R14BQ96C90 147 aa10.24□□□□□ -0.77
HERPUD1-210ENST00000565966 MAP6D1Q9H9H5 199 aa10.24□□□□□ -0.77
HERPUD1-210ENST00000565966 DOK5Q9P104 306 aa10.24□□□□□ -0.77
HERPUD1-210ENST00000565966 MBD2Q9UBB5 411 aa10.24□□□□□ -0.77
HERPUD1-210ENST00000565966 UBE2L5PA0A1B0GUS4 154 aa10.23□□□□□ -0.77
HERPUD1-210ENST00000565966 ZNF98A6NK75 572 aa10.23□□□□□ -0.77
HERPUD1-210ENST00000565966 LYL1P12980 280 aa10.23□□□□□ -0.77
HERPUD1-210ENST00000565966 CAMLGP49069 296 aa10.23□□□□□ -0.77
HERPUD1-210ENST00000565966 BAXQ07812 192 aa10.23□□□□□ -0.77
HERPUD1-210ENST00000565966 PATE2Q6UY27 113 aa10.23□□□□□ -0.77
HERPUD1-210ENST00000565966 OR5C1Q8NGR4 320 aa10.23□□□□□ -0.77
HERPUD1-210ENST00000565966 FBXL17Q9UF56 701 aa10.23□□□□□ -0.77
HERPUD1-210ENST00000565966 KIR2DL5BA0A0G2JN68 375 aa10.22□□□□□ -0.77
HERPUD1-210ENST00000565966 KIR2DL5BA0A0G2JPC4 375 aa10.22□□□□□ -0.77
HERPUD1-210ENST00000565966 H3BRN7 92 aa10.22□□□□□ -0.77
HERPUD1-210ENST00000565966 UBE2CO00762 179 aa10.22□□□□□ -0.77
HERPUD1-210ENST00000565966 HYPMO75409 117 aa10.22□□□□□ -0.77
HERPUD1-210ENST00000565966 DEFB131AP59861 70 aa10.22□□□□□ -0.77
HERPUD1-210ENST00000565966 RAB31Q13636 194 aa10.22□□□□□ -0.77
HERPUD1-210ENST00000565966 ZNF124Q15973 351 aa10.22□□□□□ -0.77
HERPUD1-210ENST00000565966 OR8I2Q8N0Y5 310 aa10.22□□□□□ -0.77
HERPUD1-210ENST00000565966 KIR2DL5AQ8N109 375 aa10.22□□□□□ -0.77
HERPUD1-210ENST00000565966 KIR2DL5BQ8NHK3 375 aa10.22□□□□□ -0.77
HERPUD1-210ENST00000565966 SLC25A39Q9BZJ4 359 aaPredicted RBP10.22□□□□□ -0.77
HERPUD1-210ENST00000565966 ARL6Q9H0F7 186 aa10.22□□□□□ -0.77
HERPUD1-210ENST00000565966 RETNQ9HD89 108 aa10.22□□□□□ -0.77
HERPUD1-210ENST00000565966 NRN1Q9NPD7 142 aa10.22□□□□□ -0.77
HERPUD1-210ENST00000565966 HIGD1AQ9Y241 93 aa10.22□□□□□ -0.77
HERPUD1-210ENST00000565966 HSPB11Q9Y547 144 aa10.22□□□□□ -0.77
HERPUD1-210ENST00000565966 GIPP09681 153 aaPredicted RBP10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 OR5G3P0C626 314 aa10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 ZNF688P0C7X2 276 aa10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 RPL35AP18077 110 aaKnown RBP10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 FGF7P21781 194 aa10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 RPL12P30050 165 aaKnown RBP10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 S100A7P31151 101 aa10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 RAP2BP61225 183 aa10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 PRR20EP86478 221 aa10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 PRR20CP86479 221 aa10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 PRR20DP86480 221 aa10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 PRR20BP86481 221 aa10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 PRR20AP86496 221 aa10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 CLINT1Q14677 625 aa10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 PXDC1Q5TGL8 231 aa10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 LEMD1Q68G75 181 aa10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 THAP6Q8TBB0 222 aa10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 CHAC2Q8WUX2 184 aa10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 UHRF2Q96PU4 802 aa10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 SHANK2-AS3Q9BTD1 123 aa10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 SCRT1Q9BWW7 348 aa10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 SLC25A32Q9H2D1 315 aa10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 SLC25A22Q9H936 323 aa10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 EDA2RQ9HAV5 297 aa10.21□□□□□ -0.77
HERPUD1-210ENST00000565966 C3orf84H3BNL1 204 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms