RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 ITLN2Q8WWU7 325 aaPredicted RBP5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 PAXXQ9BUH6 204 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 OR51M1Q9H341 326 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 FBXL15Q9H469 300 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 ZNF355PQ9NSJ1 428 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 NBASA2RRP1 2371 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 TMEM8BA6NDV4 472 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 NBR2O15453 112 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 REG1AP05451 166 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 S100A2P29034 98 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 EFNA4P52798 201 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 MFAP2P55001 183 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 SSBP2P81877 361 aaPredicted RBP5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 RPL19P84098 196 aaKnown RBP5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 MMDQ15546 238 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 TIGITQ495A1 244 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 COA6Q5JTJ3 125 aaKnown RBP5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 LINC00305Q7Z4B0 112 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 STHQ8IWL8 128 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 SGMS2Q8NHU3 365 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 TMEM190Q8WZ59 177 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 MRPL36Q9P0J6 103 aaKnown RBP5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 NAV3Q8IVL0 2385 aa5.75□□□□□ -1.49
HERPUD1-209ENST00000564678 GGTLC3B5MD39 225 aa5.75□□□□□ -1.49
HERPUD1-209ENST00000564678 FCN1O00602 326 aa5.75□□□□□ -1.49
HERPUD1-209ENST00000564678 KALRNO60229 2985 aa5.75□□□□□ -1.49
HERPUD1-209ENST00000564678 HYPMO75409 117 aa5.75□□□□□ -1.49
HERPUD1-209ENST00000564678 CNIH1O95406 144 aa5.75□□□□□ -1.49
HERPUD1-209ENST00000564678 FABP1P07148 127 aa5.75□□□□□ -1.49
HERPUD1-209ENST00000564678 SRD5A1P18405 259 aa5.75□□□□□ -1.49
HERPUD1-209ENST00000564678 HNF1AP20823 631 aa5.75□□□□□ -1.49
HERPUD1-209ENST00000564678 UBE2L3P68036 154 aaKnown RBP5.75□□□□□ -1.49
HERPUD1-209ENST00000564678 EBI3Q14213 229 aa5.75□□□□□ -1.49
HERPUD1-209ENST00000564678 ACTL10Q5JWF8 245 aa5.75□□□□□ -1.49
HERPUD1-209ENST00000564678 LDLRAD2Q5SZI1 272 aa5.75□□□□□ -1.49
HERPUD1-209ENST00000564678 HIST3H2BBQ8N257 126 aa5.75□□□□□ -1.49
HERPUD1-209ENST00000564678 OSTCQ9NRP0 149 aa5.75□□□□□ -1.49
HERPUD1-209ENST00000564678 IL36BQ9NZH7 164 aa5.75□□□□□ -1.49
HERPUD1-209ENST00000564678 HIVEP3Q5T1R4 2406 aa5.75□□□□□ -1.49
HERPUD1-209ENST00000564678 A0A1W2PPR1 153 aa5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 I3L2K1 104 aa5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 K7EN84 100 aa5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 ISLRO14498 428 aa5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 GCGP01275 180 aa5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 YPEL3P61236 119 aaPredicted RBP5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 RNF151Q2KHN1 245 aa5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 MORN5Q5VZ52 161 aa5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 ZNF562Q6V9R5 426 aa5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 AURKAIP1Q9NWT8 199 aaPredicted RBP5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 TBL2Q9Y4P3 447 aaKnown RBP5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 HILPDAQ9Y5L2 63 aa5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 SPTBN1Q01082 2364 aaKnown RBP5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 ATRXP46100 2492 aa5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 TRAV5A0A0B4J249 113 aa5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 TRIAP1O43715 76 aa5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 ELANEP08246 267 aa5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 ORM2P19652 201 aa5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 PDLIM4P50479 330 aa5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 ERVFC1-1P60608 527 aa5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 PRB3Q04118 309 aaPredicted RBP5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 C5orf64Q2M2E5 130 aa5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 CENPWQ5EE01 88 aa5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 TMEM183AQ8IXX5 376 aa5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 FXYD5Q96DB9 178 aa5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 SMIM12Q96EX1 92 aa5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 RELNP78509 3460 aa5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 ARHGAP32A7KAX9 2087 aa5.74□□□□□ -1.49
HERPUD1-209ENST00000564678 TRAV30A0A087WSZ9 112 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 IFITM10A6NMD0 228 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 IGHV3-48P01763 117 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 IGLC1P0CG04 106 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 MYCNOSP40205 109 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 FXYD3Q14802 87 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 COX19Q49B96 90 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 DNLZQ5SXM8 178 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 VMO1Q7Z5L0 202 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 LHFPL4Q7Z7J7 247 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 S100A7AQ86SG5 101 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 OR1B1Q8NGR6 318 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 RASL11BQ9BPW5 248 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 FAM110AQ9BQ89 295 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 UBTD1Q9HAC8 227 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 RNF24Q9Y225 148 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 DMRT1Q9Y5R6 373 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 TRAPPC1Q9Y5R8 145 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 V9GYV3 84 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 NCOR2Q9Y618 2525 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 A0A087X0K7 114 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 TRBV9A0A0B4J1U6 114 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 OVOL3O00110 214 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 IGLV2-8P01709 118 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 PLA2G1BP04054 148 aaKnown RBP5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 NBEAP1P0C6P0 100 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 PYYP10082 97 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 GNLYP22749 145 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 ZFP36P26651 326 aaKnown RBP5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 UBE2E1P51965 193 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 KLRD1Q13241 179 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 HES1Q14469 280 aa5.73□□□□□ -1.49
HERPUD1-209ENST00000564678 CLEC12BQ2HXU8 276 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms