RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 TPSG1Q9NRR2 321 aa9.55□□□□□ -0.88
ABCA3-203ENST00000563623 PLP1P60201 277 aa9.55□□□□□ -0.88
ABCA3-203ENST00000563623 VSTM2AQ8TAG5 236 aa9.55□□□□□ -0.88
ABCA3-203ENST00000563623 RPP21Q9H633 154 aaKnown RBP9.55□□□□□ -0.88
ABCA3-203ENST00000563623 NDUFA4L2Q9NRX3 87 aa9.55□□□□□ -0.88
ABCA3-203ENST00000563623 MALRD1Q5VYJ5 2156 aa9.54□□□□□ -0.88
ABCA3-203ENST00000563623 PIEZO2Q9H5I5 2752 aa9.54□□□□□ -0.88
ABCA3-203ENST00000563623 H0YJW9 148 aa9.54□□□□□ -0.88
ABCA3-203ENST00000563623 MC5RP33032 325 aa9.54□□□□□ -0.88
ABCA3-203ENST00000563623 CFHR2P36980 270 aa9.54□□□□□ -0.88
ABCA3-203ENST00000563623 POU2AF1Q16633 256 aa9.54□□□□□ -0.88
ABCA3-203ENST00000563623 ZNF788Q6ZQV5 615 aa9.54□□□□□ -0.88
ABCA3-203ENST00000563623 GPR82Q96P67 336 aa9.54□□□□□ -0.88
ABCA3-203ENST00000563623 DKK4Q9UBT3 224 aa9.54□□□□□ -0.88
ABCA3-203ENST00000563623 MUC3AQ02505 3323 aa9.54□□□□□ -0.88
ABCA3-203ENST00000563623 NDUFB3O43676 98 aa9.54□□□□□ -0.88
ABCA3-203ENST00000563623 TNFRSF1AP19438 455 aa9.54□□□□□ -0.88
ABCA3-203ENST00000563623 CEACAM3P40198 252 aa9.54□□□□□ -0.88
ABCA3-203ENST00000563623 CR1LQ2VPA4 569 aa9.54□□□□□ -0.88
ABCA3-203ENST00000563623 ZNF841Q6ZN19 808 aa9.54□□□□□ -0.88
ABCA3-203ENST00000563623 TMEM191AQ9H0A3 160 aa9.54□□□□□ -0.88
ABCA3-203ENST00000563623 LOC400499M0QZD8 3231 aa9.54□□□□□ -0.88
ABCA3-203ENST00000563623 LHBP01229 141 aa9.54□□□□□ -0.88
ABCA3-203ENST00000563623 GOLT1AQ6ZVE7 132 aa9.54□□□□□ -0.88
ABCA3-203ENST00000563623 NAA38Q9BRA0 125 aaKnown RBP9.54□□□□□ -0.88
ABCA3-203ENST00000563623 TMSB15BA0A087X1C1 80 aa9.53□□□□□ -0.88
ABCA3-203ENST00000563623 TOMM40O96008 361 aa9.53□□□□□ -0.88
ABCA3-203ENST00000563623 PAX2Q02962 417 aa9.53□□□□□ -0.88
ABCA3-203ENST00000563623 CIARTQ8N365 385 aaPredicted RBP9.53□□□□□ -0.88
ABCA3-203ENST00000563623 FXYD5Q96DB9 178 aa9.53□□□□□ -0.88
ABCA3-203ENST00000563623 DYNLRB1Q9NP97 96 aa9.53□□□□□ -0.88
ABCA3-203ENST00000563623 TRAV26-1A0A087WT03 109 aa9.53□□□□□ -0.88
ABCA3-203ENST00000563623 RAB9AP51151 201 aa9.53□□□□□ -0.88
ABCA3-203ENST00000563623 CKS1BP61024 79 aa9.53□□□□□ -0.88
ABCA3-203ENST00000563623 LINC00312Q9Y6C7 94 aa9.53□□□□□ -0.88
ABCA3-203ENST00000563623 SPTBN1Q01082 2364 aaKnown RBP9.53□□□□□ -0.88
ABCA3-203ENST00000563623 GUSBP1Q15486 140 aa9.52□□□□□ -0.88
ABCA3-203ENST00000563623 Q9H3A6 140 aa9.52□□□□□ -0.88
ABCA3-203ENST00000563623 TM4SF5O14894 197 aa9.52□□□□□ -0.89
ABCA3-203ENST00000563623 UQCRFS1P47985 274 aa9.52□□□□□ -0.89
ABCA3-203ENST00000563623 ATP5IP56385 69 aaPredicted RBP9.52□□□□□ -0.89
ABCA3-203ENST00000563623 LRRC10Q5BKY1 277 aa9.52□□□□□ -0.89
ABCA3-203ENST00000563623 TMEM200BQ69YZ2 307 aa9.52□□□□□ -0.89
ABCA3-203ENST00000563623 SLC25A34Q6PIV7 304 aa9.52□□□□□ -0.89
ABCA3-203ENST00000563623 ZNF48Q96MX3 618 aaPredicted RBP9.52□□□□□ -0.89
ABCA3-203ENST00000563623 MAP1LC3CQ9BXW4 147 aa9.52□□□□□ -0.89
ABCA3-203ENST00000563623 LOC389332A0A1B0GUA5 103 aa9.52□□□□□ -0.89
ABCA3-203ENST00000563623 CD40P25942 277 aa9.52□□□□□ -0.89
ABCA3-203ENST00000563623 RPL27AP46776 148 aaKnown RBP9.52□□□□□ -0.89
ABCA3-203ENST00000563623 FAM162BQ5T6X4 162 aa9.52□□□□□ -0.89
ABCA3-203ENST00000563623 LINC00322Q6ZN03 302 aaPredicted RBP9.52□□□□□ -0.89
ABCA3-203ENST00000563623 SEM1Q6ZVN7 128 aa9.52□□□□□ -0.89
ABCA3-203ENST00000563623 EXOC3-AS1Q8N2X6 119 aa9.52□□□□□ -0.89
ABCA3-203ENST00000563623 PRSS3P2Q8NHM4 247 aa9.52□□□□□ -0.89
ABCA3-203ENST00000563623 SRSF12Q8WXF0 261 aaKnown RBP9.52□□□□□ -0.89
ABCA3-203ENST00000563623 GUCD1Q96NT3 240 aa9.52□□□□□ -0.89
ABCA3-203ENST00000563623 MRPS16Q9Y3D3 137 aaKnown RBP9.52□□□□□ -0.89
ABCA3-203ENST00000563623 PPIAL4EA0A075B759 164 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 IGHV2-26A0A0B4J1V2 119 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 MUC21A0A0G2JKD1 596 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 MUC21A0A140T8X8 626 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 A0A1W2PPI3 338 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 PPIAL4DF5H284 164 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 PPIAL4FP0DN26 164 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 COX7A1P24310 79 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 MUC21Q5SSG8 566 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 SPATA12Q7Z6I5 190 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 S4R3C0 116 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 VWC2LB2RUY7 222 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 CNIH1O95406 144 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 CRYBA4P53673 196 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 LYPD2Q6UXB3 125 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 C22orf34Q6ZV56 151 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 RITA1Q96K30 269 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.51□□□□□ -0.89
ABCA3-203ENST00000563623 AZU1P20160 251 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 RBPJQ06330 500 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 FAM231DQ6ZW35 169 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 FA2HQ7L5A8 372 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 FER1L6-AS1Q8NA97 138 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 C5orf17Q8NAS9 161 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 BOD1L1Q8NFC6 3051 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 THYN1Q9P016 225 aa9.51□□□□□ -0.89
ABCA3-203ENST00000563623 C19orf67A6NJJ6 358 aa9.5□□□□□ -0.89
ABCA3-203ENST00000563623 SYS1-DBNDD2H3BUS1 97 aa9.5□□□□□ -0.89
ABCA3-203ENST00000563623 OR8A1Q8NGG7 326 aa9.5□□□□□ -0.89
ABCA3-203ENST00000563623 TMEM167AQ8TBQ9 72 aa9.5□□□□□ -0.89
ABCA3-203ENST00000563623 IGHV1-69-2A0A0G2JMI3 117 aa9.5□□□□□ -0.89
ABCA3-203ENST00000563623 C2orf70A6NJV1 201 aa9.5□□□□□ -0.89
ABCA3-203ENST00000563623 CNTFRP26992 372 aa9.5□□□□□ -0.89
ABCA3-203ENST00000563623 RASL11AQ6T310 242 aa9.5□□□□□ -0.89
ABCA3-203ENST00000563623 PNKDQ8N490 385 aa9.5□□□□□ -0.89
ABCA3-203ENST00000563623 FAM222BQ8WU58 562 aa9.5□□□□□ -0.89
ABCA3-203ENST00000563623 MBD6Q96DN6 1003 aa9.5□□□□□ -0.89
ABCA3-203ENST00000563623 HIGD1AQ9Y241 93 aa9.5□□□□□ -0.89
ABCA3-203ENST00000563623 A0A087X0K7 114 aa9.5□□□□□ -0.89
ABCA3-203ENST00000563623 IGHV1-24A0A0C4DH33 117 aa9.5□□□□□ -0.89
ABCA3-203ENST00000563623 PSG9Q00887 426 aa9.5□□□□□ -0.89
ABCA3-203ENST00000563623 RBPMS2Q6ZRY4 209 aaKnown RBP9.5□□□□□ -0.89
ABCA3-203ENST00000563623 SIGMAR1Q99720 223 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms