RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 PTTG1O95997 202 aa11.26□□□□□ -0.61
SNRPA1-213ENST00000560856 CAV2P51636 162 aa11.26□□□□□ -0.61
SNRPA1-213ENST00000560856 AP2S1P53680 142 aaPredicted RBP11.26□□□□□ -0.61
SNRPA1-213ENST00000560856 PLP1P60201 277 aa11.26□□□□□ -0.61
SNRPA1-213ENST00000560856 SIGLEC15Q6ZMC9 328 aa11.26□□□□□ -0.61
SNRPA1-213ENST00000560856 C17orf77Q96MU5 243 aa11.26□□□□□ -0.61
SNRPA1-213ENST00000560856 EDA2RQ9HAV5 297 aa11.26□□□□□ -0.61
SNRPA1-213ENST00000560856 MGAT4CQ9UBM8 478 aa11.26□□□□□ -0.61
SNRPA1-213ENST00000560856 KIR2DL5BA0A0G2JN68 375 aa11.25□□□□□ -0.61
SNRPA1-213ENST00000560856 KIR2DL5BA0A0G2JPC4 375 aa11.25□□□□□ -0.61
SNRPA1-213ENST00000560856 RPL35AP18077 110 aaKnown RBP11.25□□□□□ -0.61
SNRPA1-213ENST00000560856 PVALBP20472 110 aaPredicted RBP11.25□□□□□ -0.61
SNRPA1-213ENST00000560856 NUP62P37198 522 aaPredicted RBP11.25□□□□□ -0.61
SNRPA1-213ENST00000560856 BCAP31P51572 246 aa11.25□□□□□ -0.61
SNRPA1-213ENST00000560856 SELENOTP62341 195 aa11.25□□□□□ -0.61
SNRPA1-213ENST00000560856 SLC38A11Q08AI6 406 aa11.25□□□□□ -0.61
SNRPA1-213ENST00000560856 VWC2Q2TAL6 325 aa11.25□□□□□ -0.61
SNRPA1-213ENST00000560856 LEMD1Q68G75 181 aa11.25□□□□□ -0.61
SNRPA1-213ENST00000560856 TEPPQ6URK8 271 aa11.25□□□□□ -0.61
SNRPA1-213ENST00000560856 KIR2DL5AQ8N109 375 aa11.25□□□□□ -0.61
SNRPA1-213ENST00000560856 KIR2DL5BQ8NHK3 375 aa11.25□□□□□ -0.61
SNRPA1-213ENST00000560856 NRN1Q9NPD7 142 aa11.25□□□□□ -0.61
SNRPA1-213ENST00000560856 PFDN2Q9UHV9 154 aa11.25□□□□□ -0.61
SNRPA1-213ENST00000560856 ZNF98A6NK75 572 aa11.24□□□□□ -0.61
SNRPA1-213ENST00000560856 ZNF688P0C7X2 276 aa11.24□□□□□ -0.61
SNRPA1-213ENST00000560856 ORM2P19652 201 aa11.24□□□□□ -0.61
SNRPA1-213ENST00000560856 SULT1A1P50225 295 aa11.24□□□□□ -0.61
SNRPA1-213ENST00000560856 CYCSP99999 105 aaKnown RBP11.24□□□□□ -0.61
SNRPA1-213ENST00000560856 PATE2Q6UY27 113 aa11.24□□□□□ -0.61
SNRPA1-213ENST00000560856 TMEM217Q8N7C4 229 aa11.24□□□□□ -0.61
SNRPA1-213ENST00000560856 MGST2Q99735 147 aa11.24□□□□□ -0.61
SNRPA1-213ENST00000560856 OVOL2Q9BRP0 275 aa11.24□□□□□ -0.61
SNRPA1-213ENST00000560856 RNF126Q9BV68 326 aa11.24□□□□□ -0.61
SNRPA1-213ENST00000560856 SEPSECSQ9HD40 501 aaKnown RBP11.24□□□□□ -0.61
SNRPA1-213ENST00000560856 OR5AC2Q9NZP5 309 aa11.24□□□□□ -0.61
SNRPA1-213ENST00000560856 ALG5Q9Y673 324 aa11.24□□□□□ -0.61
SNRPA1-213ENST00000560856 SOCS3O14543 225 aa11.23□□□□□ -0.61
SNRPA1-213ENST00000560856 AGPAT2O15120 278 aa11.23□□□□□ -0.61
SNRPA1-213ENST00000560856 SSNA1O43805 119 aa11.23□□□□□ -0.61
SNRPA1-213ENST00000560856 LINC00869P0C866 280 aa11.23□□□□□ -0.61
SNRPA1-213ENST00000560856 APOC4P55056 127 aa11.23□□□□□ -0.61
SNRPA1-213ENST00000560856 Q6ZWC4 215 aa11.23□□□□□ -0.61
SNRPA1-213ENST00000560856 OR1B1Q8NGR6 318 aa11.23□□□□□ -0.61
SNRPA1-213ENST00000560856 SLC25A32Q9H2D1 315 aa11.23□□□□□ -0.61
SNRPA1-213ENST00000560856 FBXL17Q9UF56 701 aa11.23□□□□□ -0.61
SNRPA1-213ENST00000560856 WDR83OSQ9Y284 106 aa11.23□□□□□ -0.61
SNRPA1-213ENST00000560856 H3BRN7 92 aa11.22□□□□□ -0.61
SNRPA1-213ENST00000560856 UBE2CO00762 179 aa11.22□□□□□ -0.61
SNRPA1-213ENST00000560856 S100A11P31949 105 aa11.22□□□□□ -0.61
SNRPA1-213ENST00000560856 LRRC37A5PQ49AS3 106 aa11.22□□□□□ -0.61
SNRPA1-213ENST00000560856 OR8I2Q8N0Y5 310 aa11.22□□□□□ -0.61
SNRPA1-213ENST00000560856 PPP1R1CQ8WVI7 109 aa11.22□□□□□ -0.61
SNRPA1-213ENST00000560856 PPP1R14BQ96C90 147 aa11.22□□□□□ -0.61
SNRPA1-213ENST00000560856 SHANK2-AS3Q9BTD1 123 aa11.22□□□□□ -0.61
SNRPA1-213ENST00000560856 TMEM147Q9BVK8 224 aa11.22□□□□□ -0.61
SNRPA1-213ENST00000560856 SLC25A39Q9BZJ4 359 aaPredicted RBP11.22□□□□□ -0.61
SNRPA1-213ENST00000560856 UQCC1Q9NVA1 299 aa11.22□□□□□ -0.61
SNRPA1-213ENST00000560856 DOK5Q9P104 306 aa11.22□□□□□ -0.61
SNRPA1-213ENST00000560856 KNCNA6PVL3 124 aa11.21□□□□□ -0.61
SNRPA1-213ENST00000560856 E5RGE8 158 aa11.21□□□□□ -0.61
SNRPA1-213ENST00000560856 HYPMO75409 117 aa11.21□□□□□ -0.61
SNRPA1-213ENST00000560856 RLN2P04090 185 aa11.21□□□□□ -0.61
SNRPA1-213ENST00000560856 NHLH2Q02577 135 aa11.21□□□□□ -0.61
SNRPA1-213ENST00000560856 TRPT1Q86TN4 253 aaKnown RBP11.21□□□□□ -0.61
SNRPA1-213ENST00000560856 STX12Q86Y82 276 aa11.21□□□□□ -0.61
SNRPA1-213ENST00000560856 SCRT1Q9BWW7 348 aa11.21□□□□□ -0.61
SNRPA1-213ENST00000560856 CSTL1Q9H114 145 aa11.21□□□□□ -0.61
SNRPA1-213ENST00000560856 HIGD1AQ9Y241 93 aa11.21□□□□□ -0.61
SNRPA1-213ENST00000560856 TP53TG1Q9Y2A0 90 aa11.21□□□□□ -0.61
SNRPA1-213ENST00000560856 MPC2O95563 127 aa11.2□□□□□ -0.62
SNRPA1-213ENST00000560856 GIG44P09565 113 aaPredicted RBP11.2□□□□□ -0.62
SNRPA1-213ENST00000560856 CXCL3P19876 107 aa11.2□□□□□ -0.62
SNRPA1-213ENST00000560856 PRR20EP86478 221 aa11.2□□□□□ -0.62
SNRPA1-213ENST00000560856 PRR20CP86479 221 aa11.2□□□□□ -0.62
SNRPA1-213ENST00000560856 PRR20DP86480 221 aa11.2□□□□□ -0.62
SNRPA1-213ENST00000560856 PRR20BP86481 221 aa11.2□□□□□ -0.62
SNRPA1-213ENST00000560856 PRR20AP86496 221 aa11.2□□□□□ -0.62
SNRPA1-213ENST00000560856 EWSR1Q01844 656 aaKnown RBP eCLIP11.2□□□□□ -0.62
SNRPA1-213ENST00000560856 ATP6V1FQ16864 119 aa11.2□□□□□ -0.62
SNRPA1-213ENST00000560856 PSMG4Q5JS54 123 aa11.2□□□□□ -0.62
SNRPA1-213ENST00000560856 ZNF546Q86UE3 836 aa11.2□□□□□ -0.62
SNRPA1-213ENST00000560856 CHAC2Q8WUX2 184 aa11.2□□□□□ -0.62
SNRPA1-213ENST00000560856 RNF183Q96D59 192 aa11.2□□□□□ -0.62
SNRPA1-213ENST00000560856 UHRF2Q96PU4 802 aa11.2□□□□□ -0.62
SNRPA1-213ENST00000560856 ARL6Q9H0F7 186 aa11.2□□□□□ -0.62
SNRPA1-213ENST00000560856 SLC25A22Q9H936 323 aa11.2□□□□□ -0.62
SNRPA1-213ENST00000560856 CAMLGP49069 296 aa11.19□□□□□ -0.62
SNRPA1-213ENST00000560856 RAP2BP61225 183 aa11.19□□□□□ -0.62
SNRPA1-213ENST00000560856 HBG1P69891 147 aa11.19□□□□□ -0.62
SNRPA1-213ENST00000560856 HBG2P69892 147 aa11.19□□□□□ -0.62
SNRPA1-213ENST00000560856 DEFB135Q30KP9 77 aa11.19□□□□□ -0.62
SNRPA1-213ENST00000560856 PXDC1Q5TGL8 231 aa11.19□□□□□ -0.62
SNRPA1-213ENST00000560856 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.19□□□□□ -0.62
SNRPA1-213ENST00000560856 TMEM37Q8WXS4 190 aa11.19□□□□□ -0.62
SNRPA1-213ENST00000560856 RSG1Q9BU20 258 aa11.19□□□□□ -0.62
SNRPA1-213ENST00000560856 MRPS12O15235 138 aaKnown RBP11.18□□□□□ -0.62
SNRPA1-213ENST00000560856 SPRY2O43597 315 aa11.18□□□□□ -0.62
SNRPA1-213ENST00000560856 OR5G3P0C626 314 aa11.18□□□□□ -0.62
SNRPA1-213ENST00000560856 GALR1P47211 349 aa11.18□□□□□ -0.62
SNRPA1-213ENST00000560856 DEFB1P60022 68 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms