RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 TECRQ9NZ01 308 aaKnown RBP11.19□□□□□ -0.62
SNRPA1-207ENST00000559309 MLXQ9UH92 298 aa11.19□□□□□ -0.62
SNRPA1-207ENST00000559309 PXMP4Q9Y6I8 212 aa11.19□□□□□ -0.62
SNRPA1-207ENST00000559309 HNRNPCP07910 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
SNRPA1-207ENST00000559309 B2MP61769 119 aa11.18□□□□□ -0.62
SNRPA1-207ENST00000559309 DEFB114Q30KQ6 69 aa11.18□□□□□ -0.62
SNRPA1-207ENST00000559309 C9orf66Q5T8R8 295 aa11.18□□□□□ -0.62
SNRPA1-207ENST00000559309 METTL26Q96S19 204 aa11.18□□□□□ -0.62
SNRPA1-207ENST00000559309 C20orf24Q9BUV8 137 aa11.18□□□□□ -0.62
SNRPA1-207ENST00000559309 ELOVL1Q9BW60 279 aa11.18□□□□□ -0.62
SNRPA1-207ENST00000559309 ARL6Q9H0F7 186 aa11.18□□□□□ -0.62
SNRPA1-207ENST00000559309 KCNIP2Q9NS61 270 aa11.18□□□□□ -0.62
SNRPA1-207ENST00000559309 RFNGQ9Y644 331 aa11.18□□□□□ -0.62
SNRPA1-207ENST00000559309 NOTCH1P46531 2555 aa11.18□□□□□ -0.62
SNRPA1-207ENST00000559309 ELOA3CA0A087WX78 387 aaPredicted RBP11.17□□□□□ -0.62
SNRPA1-207ENST00000559309 SEC14L6B5MCN3 397 aa11.17□□□□□ -0.62
SNRPA1-207ENST00000559309 C17orf112F2Z3M2 114 aa11.17□□□□□ -0.62
SNRPA1-207ENST00000559309 H3BRN7 92 aa11.17□□□□□ -0.62
SNRPA1-207ENST00000559309 SPP1P10451 314 aa11.17□□□□□ -0.62
SNRPA1-207ENST00000559309 IGLL1P15814 213 aa11.17□□□□□ -0.62
SNRPA1-207ENST00000559309 NPPCP23582 126 aa11.17□□□□□ -0.62
SNRPA1-207ENST00000559309 LYZP61626 148 aa11.17□□□□□ -0.62
SNRPA1-207ENST00000559309 SERF2P84101 59 aa11.17□□□□□ -0.62
SNRPA1-207ENST00000559309 EGFEM1PQ0D2K5 195 aa11.17□□□□□ -0.62
SNRPA1-207ENST00000559309 C16orf54Q6UWD8 224 aa11.17□□□□□ -0.62
SNRPA1-207ENST00000559309 OR2K2Q8NGT1 345 aa11.17□□□□□ -0.62
SNRPA1-207ENST00000559309 SCGB1C1Q8TD33 95 aa11.17□□□□□ -0.62
SNRPA1-207ENST00000559309 GLMPQ8WWB7 406 aa11.17□□□□□ -0.62
SNRPA1-207ENST00000559309 ST8SIA2Q92186 375 aa11.17□□□□□ -0.62
SNRPA1-207ENST00000559309 C17orf77Q96MU5 243 aa11.17□□□□□ -0.62
SNRPA1-207ENST00000559309 RHPN1-AS1Q9BWJ2 59 aa11.17□□□□□ -0.62
SNRPA1-207ENST00000559309 RABAC1Q9UI14 185 aa11.17□□□□□ -0.62
SNRPA1-207ENST00000559309 BORCS7-ASMTA0A0B4J1R7 106 aa11.16□□□□□ -0.62
SNRPA1-207ENST00000559309 MRPS12O15235 138 aaKnown RBP11.16□□□□□ -0.62
SNRPA1-207ENST00000559309 ZNF207O43670 478 aaKnown RBP11.16□□□□□ -0.62
SNRPA1-207ENST00000559309 PFDN1O60925 122 aa11.16□□□□□ -0.62
SNRPA1-207ENST00000559309 HYPMO75409 117 aa11.16□□□□□ -0.62
SNRPA1-207ENST00000559309 OR5G3P0C626 314 aa11.16□□□□□ -0.62
SNRPA1-207ENST00000559309 GCSAMLQ5JQS6 135 aa11.16□□□□□ -0.62
SNRPA1-207ENST00000559309 C1orf194Q5T5A4 169 aa11.16□□□□□ -0.62
SNRPA1-207ENST00000559309 KPRPQ5T749 579 aaPredicted RBP11.16□□□□□ -0.62
SNRPA1-207ENST00000559309 GATAD1Q8WUU5 269 aa11.16□□□□□ -0.62
SNRPA1-207ENST00000559309 GNPNAT1Q96EK6 184 aaPredicted RBP11.16□□□□□ -0.62
SNRPA1-207ENST00000559309 SHANK2-AS3Q9BTD1 123 aa11.16□□□□□ -0.62
SNRPA1-207ENST00000559309 SLC25A39Q9BZJ4 359 aaPredicted RBP11.16□□□□□ -0.62
SNRPA1-207ENST00000559309 DNAJC4Q9NNZ3 241 aa11.16□□□□□ -0.62
SNRPA1-207ENST00000559309 NOTCH3Q9UM47 2321 aa11.16□□□□□ -0.62
SNRPA1-207ENST00000559309 TRAV25A0A0B4J276 109 aa11.15□□□□□ -0.62
SNRPA1-207ENST00000559309 KANTRA0A1W2PQU2 76 aa11.15□□□□□ -0.62
SNRPA1-207ENST00000559309 A0A1W2PS18 150 aa11.15□□□□□ -0.62
SNRPA1-207ENST00000559309 ZNF98A6NK75 572 aa11.15□□□□□ -0.62
SNRPA1-207ENST00000559309 ORM2P19652 201 aa11.15□□□□□ -0.62
SNRPA1-207ENST00000559309 MORN5Q5VZ52 161 aa11.15□□□□□ -0.62
SNRPA1-207ENST00000559309 Q6ZRG5 221 aa11.15□□□□□ -0.62
SNRPA1-207ENST00000559309 HSD17B11Q8NBQ5 300 aa11.15□□□□□ -0.62
SNRPA1-207ENST00000559309 OR1L4Q8NGR5 311 aa11.15□□□□□ -0.62
SNRPA1-207ENST00000559309 PFDN5Q99471 154 aa11.15□□□□□ -0.62
SNRPA1-207ENST00000559309 RNF2Q99496 336 aa11.15□□□□□ -0.62
SNRPA1-207ENST00000559309 SH3BGRL3Q9H299 93 aa11.15□□□□□ -0.62
SNRPA1-207ENST00000559309 PLA2G2EQ9NZK7 142 aa11.15□□□□□ -0.62
SNRPA1-207ENST00000559309 HIGD1AQ9Y241 93 aa11.15□□□□□ -0.62
SNRPA1-207ENST00000559309 SAP30O75446 220 aa11.14□□□□□ -0.63
SNRPA1-207ENST00000559309 CD5P06127 495 aa11.14□□□□□ -0.63
SNRPA1-207ENST00000559309 SEC11BP0C7V7 166 aa11.14□□□□□ -0.63
SNRPA1-207ENST00000559309 NKX2-5P52952 324 aaPredicted RBP11.14□□□□□ -0.63
SNRPA1-207ENST00000559309 BAP18Q8IXM2 172 aa11.14□□□□□ -0.63
SNRPA1-207ENST00000559309 ZNF709Q8N972 641 aa11.14□□□□□ -0.63
SNRPA1-207ENST00000559309 OR1B1Q8NGR6 318 aa11.14□□□□□ -0.63
SNRPA1-207ENST00000559309 PPP1R14BQ96C90 147 aa11.14□□□□□ -0.63
SNRPA1-207ENST00000559309 UHRF2Q96PU4 802 aa11.14□□□□□ -0.63
SNRPA1-207ENST00000559309 PBDC1Q9BVG4 233 aa11.14□□□□□ -0.63
SNRPA1-207ENST00000559309 GPR61Q9BZJ8 451 aa11.14□□□□□ -0.63
SNRPA1-207ENST00000559309 ZNF785A8K8V0 405 aa11.13□□□□□ -0.63
SNRPA1-207ENST00000559309 BOLA2-SMG1P6H3BVE0 249 aa11.13□□□□□ -0.63
SNRPA1-207ENST00000559309 TSPAN4O14817 238 aa11.13□□□□□ -0.63
SNRPA1-207ENST00000559309 CD300EQ496F6 205 aaPredicted RBP11.13□□□□□ -0.63
SNRPA1-207ENST00000559309 OXLD1Q5BKU9 147 aa11.13□□□□□ -0.63
SNRPA1-207ENST00000559309 C10orf113Q5VZT2 155 aa11.13□□□□□ -0.63
SNRPA1-207ENST00000559309 LINC00305Q7Z4B0 112 aa11.13□□□□□ -0.63
SNRPA1-207ENST00000559309 SLC51BQ86UW2 128 aa11.13□□□□□ -0.63
SNRPA1-207ENST00000559309 TMEM61Q8N0U2 210 aa11.13□□□□□ -0.63
SNRPA1-207ENST00000559309 FAM167A-AS1Q96KT0 104 aa11.13□□□□□ -0.63
SNRPA1-207ENST00000559309 SCRT1Q9BWW7 348 aa11.13□□□□□ -0.63
SNRPA1-207ENST00000559309 ZNF471Q9BX82 626 aaPredicted RBP11.13□□□□□ -0.63
SNRPA1-207ENST00000559309 SEPSECSQ9HD40 501 aaKnown RBP11.13□□□□□ -0.63
SNRPA1-207ENST00000559309 DOK5Q9P104 306 aa11.13□□□□□ -0.63
SNRPA1-207ENST00000559309 SMAD5-AS1Q9Y6J3 95 aa11.13□□□□□ -0.63
SNRPA1-207ENST00000559309 IGHV3-49A0A0A0MS15 119 aa11.12□□□□□ -0.63
SNRPA1-207ENST00000559309 IZUMO1RA6ND01 250 aa11.12□□□□□ -0.63
SNRPA1-207ENST00000559309 COX7A2P2O60397 106 aa11.12□□□□□ -0.63
SNRPA1-207ENST00000559309 M6PRP20645 277 aa11.12□□□□□ -0.63
SNRPA1-207ENST00000559309 BEAN1Q3B7T3 259 aa11.12□□□□□ -0.63
SNRPA1-207ENST00000559309 FFAR4Q5NUL3 377 aa11.12□□□□□ -0.63
SNRPA1-207ENST00000559309 RPP25LQ8N5L8 163 aaKnown RBP11.12□□□□□ -0.63
SNRPA1-207ENST00000559309 TMEM231Q9H6L2 316 aa11.12□□□□□ -0.63
SNRPA1-207ENST00000559309 ZNF256Q9Y2P7 627 aaPredicted RBP11.12□□□□□ -0.63
SNRPA1-207ENST00000559309 IGHV3OR16-13A0A075B7E8 117 aa11.11□□□□□ -0.63
SNRPA1-207ENST00000559309 IGHV3-74A0A0B4J1X5 117 aa11.11□□□□□ -0.63
SNRPA1-207ENST00000559309 TRAV2A0A0B4J234 112 aa11.11□□□□□ -0.63
SNRPA1-207ENST00000559309 G3V4G9 280 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms