RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 LINC00869P0C866 280 aa11.78□□□□□ -0.52
RABGGTA-206ENST00000558649 TMEM147Q9BVK8 224 aa11.78□□□□□ -0.52
RABGGTA-206ENST00000558649 SLC25A22Q9H936 323 aa11.78□□□□□ -0.52
RABGGTA-206ENST00000558649 RETNQ9HD89 108 aa11.78□□□□□ -0.52
RABGGTA-206ENST00000558649 COL7A1Q02388 2944 aa11.77□□□□□ -0.52
RABGGTA-206ENST00000558649 LOC102724200A0A096LPH7 203 aaPredicted RBP11.77□□□□□ -0.53
RABGGTA-206ENST00000558649 UBE2L5PA0A1B0GUS4 154 aa11.77□□□□□ -0.53
RABGGTA-206ENST00000558649 H0YIZ8 118 aa11.77□□□□□ -0.53
RABGGTA-206ENST00000558649 RPL35AP18077 110 aaKnown RBP11.77□□□□□ -0.53
RABGGTA-206ENST00000558649 AP2S1P53680 142 aaPredicted RBP11.77□□□□□ -0.53
RABGGTA-206ENST00000558649 DEFB131AP59861 70 aa11.77□□□□□ -0.53
RABGGTA-206ENST00000558649 HBG1P69891 147 aa11.77□□□□□ -0.53
RABGGTA-206ENST00000558649 HBG2P69892 147 aa11.77□□□□□ -0.53
RABGGTA-206ENST00000558649 LEMD1Q68G75 181 aa11.77□□□□□ -0.53
RABGGTA-206ENST00000558649 STPG3Q8N7X2 389 aa11.77□□□□□ -0.53
RABGGTA-206ENST00000558649 RCHY1Q96PM5 261 aa11.77□□□□□ -0.53
RABGGTA-206ENST00000558649 TM2D3Q9BRN9 247 aa11.77□□□□□ -0.53
RABGGTA-206ENST00000558649 GGTLC1Q9BX51 225 aa11.77□□□□□ -0.53
RABGGTA-206ENST00000558649 MED28Q9H204 178 aa11.77□□□□□ -0.53
RABGGTA-206ENST00000558649 UQCC1Q9NVA1 299 aa11.77□□□□□ -0.53
RABGGTA-206ENST00000558649 TRAV2A0A0B4J234 112 aa11.76□□□□□ -0.53
RABGGTA-206ENST00000558649 K7EQG2 157 aa11.76□□□□□ -0.53
RABGGTA-206ENST00000558649 AGPAT2O15120 278 aa11.76□□□□□ -0.53
RABGGTA-206ENST00000558649 OR5G3P0C626 314 aa11.76□□□□□ -0.53
RABGGTA-206ENST00000558649 ZNF688P0C7X2 276 aa11.76□□□□□ -0.53
RABGGTA-206ENST00000558649 CXCL3P19876 107 aa11.76□□□□□ -0.53
RABGGTA-206ENST00000558649 S100A11P31949 105 aa11.76□□□□□ -0.53
RABGGTA-206ENST00000558649 CMC4P56277 68 aaPredicted RBP11.76□□□□□ -0.53
RABGGTA-206ENST00000558649 SELENOTP62341 195 aa11.76□□□□□ -0.53
RABGGTA-206ENST00000558649 BAXQ07812 192 aa11.76□□□□□ -0.53
RABGGTA-206ENST00000558649 LINC00322Q6ZN03 302 aaPredicted RBP11.76□□□□□ -0.53
RABGGTA-206ENST00000558649 ZNF546Q86UE3 836 aa11.76□□□□□ -0.53
RABGGTA-206ENST00000558649 OR8I2Q8N0Y5 310 aa11.76□□□□□ -0.53
RABGGTA-206ENST00000558649 DCANP1Q8TF63 244 aa11.76□□□□□ -0.53
RABGGTA-206ENST00000558649 MGST2Q99735 147 aa11.76□□□□□ -0.53
RABGGTA-206ENST00000558649 FAM110AQ9BQ89 295 aa11.76□□□□□ -0.53
RABGGTA-206ENST00000558649 SPATA25Q9BR10 227 aa11.76□□□□□ -0.53
RABGGTA-206ENST00000558649 MPC2O95563 127 aa11.75□□□□□ -0.53
RABGGTA-206ENST00000558649 PET100P0DJ07 73 aa11.75□□□□□ -0.53
RABGGTA-206ENST00000558649 RAP2BP61225 183 aa11.75□□□□□ -0.53
RABGGTA-206ENST00000558649 EWSR1Q01844 656 aaKnown RBP eCLIP11.75□□□□□ -0.53
RABGGTA-206ENST00000558649 NHLH2Q02577 135 aa11.75□□□□□ -0.53
RABGGTA-206ENST00000558649 FCN2Q15485 313 aa11.75□□□□□ -0.53
RABGGTA-206ENST00000558649 SCRT1Q9BWW7 348 aa11.75□□□□□ -0.53
RABGGTA-206ENST00000558649 SLC25A31Q9H0C2 315 aa11.75□□□□□ -0.53
RABGGTA-206ENST00000558649 ARL6Q9H0F7 186 aa11.75□□□□□ -0.53
RABGGTA-206ENST00000558649 NRN1Q9NPD7 142 aa11.75□□□□□ -0.53
RABGGTA-206ENST00000558649 FBXL17Q9UF56 701 aa11.75□□□□□ -0.53
RABGGTA-206ENST00000558649 HIGD1AQ9Y241 93 aa11.75□□□□□ -0.53
RABGGTA-206ENST00000558649 ZNF98A6NK75 572 aa11.74□□□□□ -0.53
RABGGTA-206ENST00000558649 HYPMO75409 117 aa11.74□□□□□ -0.53
RABGGTA-206ENST00000558649 CAMLGP49069 296 aa11.74□□□□□ -0.53
RABGGTA-206ENST00000558649 RAB31Q13636 194 aa11.74□□□□□ -0.53
RABGGTA-206ENST00000558649 PSMG4Q5JS54 123 aa11.74□□□□□ -0.53
RABGGTA-206ENST00000558649 C1orf194Q5T5A4 169 aa11.74□□□□□ -0.53
RABGGTA-206ENST00000558649 OR11H7Q8NGC8 314 aa11.74□□□□□ -0.53
RABGGTA-206ENST00000558649 OR5C1Q8NGR4 320 aa11.74□□□□□ -0.53
RABGGTA-206ENST00000558649 UHRF2Q96PU4 802 aa11.74□□□□□ -0.53
RABGGTA-206ENST00000558649 SLC25A32Q9H2D1 315 aa11.74□□□□□ -0.53
RABGGTA-206ENST00000558649 MBD2Q9UBB5 411 aa11.74□□□□□ -0.53
RABGGTA-206ENST00000558649 FGF7P21781 194 aa11.73□□□□□ -0.53
RABGGTA-206ENST00000558649 APOC4P55056 127 aa11.73□□□□□ -0.53
RABGGTA-206ENST00000558649 CLINT1Q14677 625 aa11.73□□□□□ -0.53
RABGGTA-206ENST00000558649 VWC2Q2TAL6 325 aa11.73□□□□□ -0.53
RABGGTA-206ENST00000558649 RNF126Q9BV68 326 aa11.73□□□□□ -0.53
RABGGTA-206ENST00000558649 SLC25A39Q9BZJ4 359 aaPredicted RBP11.73□□□□□ -0.53
RABGGTA-206ENST00000558649 SLC45A2Q9UMX9 530 aa11.73□□□□□ -0.53
RABGGTA-206ENST00000558649 WDR83OSQ9Y284 106 aa11.73□□□□□ -0.53
RABGGTA-206ENST00000558649 DNAH9Q9NYC9 4486 aa11.72□□□□□ -0.53
RABGGTA-206ENST00000558649 H3BRN7 92 aa11.72□□□□□ -0.53
RABGGTA-206ENST00000558649 COX7A2P2O60397 106 aa11.72□□□□□ -0.53
RABGGTA-206ENST00000558649 S100A7P31151 101 aa11.72□□□□□ -0.53
RABGGTA-206ENST00000558649 GALR1P47211 349 aa11.72□□□□□ -0.53
RABGGTA-206ENST00000558649 SNRPD3P62318 126 aaKnown RBP11.72□□□□□ -0.53
RABGGTA-206ENST00000558649 ATP6V1FQ16864 119 aa11.72□□□□□ -0.53
RABGGTA-206ENST00000558649 MIC13Q5XKP0 118 aa11.72□□□□□ -0.53
RABGGTA-206ENST00000558649 THAP6Q8TBB0 222 aa11.72□□□□□ -0.53
RABGGTA-206ENST00000558649 SHANK2-AS3Q9BTD1 123 aa11.72□□□□□ -0.53
RABGGTA-206ENST00000558649 ARV1Q9H2C2 271 aa11.72□□□□□ -0.53
RABGGTA-206ENST00000558649 KNCNA6PVL3 124 aa11.71□□□□□ -0.53
RABGGTA-206ENST00000558649 PLP1P60201 277 aa11.71□□□□□ -0.53
RABGGTA-206ENST00000558649 OXA1LQ15070 435 aa11.71□□□□□ -0.53
RABGGTA-206ENST00000558649 PATE2Q6UY27 113 aa11.71□□□□□ -0.53
RABGGTA-206ENST00000558649 STHQ8IWL8 128 aa11.71□□□□□ -0.53
RABGGTA-206ENST00000558649 RPL12P30050 165 aaKnown RBP11.7□□□□□ -0.54
RABGGTA-206ENST00000558649 DEFB135Q30KP9 77 aa11.7□□□□□ -0.54
RABGGTA-206ENST00000558649 ACTL10Q5JWF8 245 aa11.7□□□□□ -0.54
RABGGTA-206ENST00000558649 LINC00305Q7Z4B0 112 aa11.7□□□□□ -0.54
RABGGTA-206ENST00000558649 LINC00052Q96N35 136 aa11.7□□□□□ -0.54
RABGGTA-206ENST00000558649 WWC2-AS2Q96NR7 200 aa11.7□□□□□ -0.54
RABGGTA-206ENST00000558649 RSG1Q9BU20 258 aa11.7□□□□□ -0.54
RABGGTA-206ENST00000558649 SMIM3Q9BZL3 60 aa11.7□□□□□ -0.54
RABGGTA-206ENST00000558649 ATF4P18848 351 aaPredicted RBP11.69□□□□□ -0.54
RABGGTA-206ENST00000558649 ID1P41134 155 aa11.69□□□□□ -0.54
RABGGTA-206ENST00000558649 FGL1Q08830 312 aa11.69□□□□□ -0.54
RABGGTA-206ENST00000558649 OPCMLQ14982 345 aa11.69□□□□□ -0.54
RABGGTA-206ENST00000558649 PXDC1Q5TGL8 231 aa11.69□□□□□ -0.54
RABGGTA-206ENST00000558649 C10orf113Q5VZT2 155 aa11.69□□□□□ -0.54
RABGGTA-206ENST00000558649 Q6ZRG5 221 aa11.69□□□□□ -0.54
RABGGTA-206ENST00000558649 S100A7AQ86SG5 101 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms