RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 Q6ZRG5 221 aa16.07■□□□□ 0.16
CASC4-204ENST00000557945 GRAMD2BQ96HH9 432 aa16.07■□□□□ 0.16
CASC4-204ENST00000557945 RNF2Q99496 336 aa16.07■□□□□ 0.16
CASC4-204ENST00000557945 RSG1Q9BU20 258 aa16.07■□□□□ 0.16
CASC4-204ENST00000557945 PARD6GQ9BYG4 376 aaPredicted RBP16.07■□□□□ 0.16
CASC4-204ENST00000557945 SLC39A9Q9NUM3 307 aa16.07■□□□□ 0.16
CASC4-204ENST00000557945 BORCS7-ASMTA0A0B4J1R7 106 aa16.06■□□□□ 0.16
CASC4-204ENST00000557945 PLP1P60201 277 aa16.06■□□□□ 0.16
CASC4-204ENST00000557945 PRR20EP86478 221 aa16.06■□□□□ 0.16
CASC4-204ENST00000557945 PRR20CP86479 221 aa16.06■□□□□ 0.16
CASC4-204ENST00000557945 PRR20DP86480 221 aa16.06■□□□□ 0.16
CASC4-204ENST00000557945 PRR20BP86481 221 aa16.06■□□□□ 0.16
CASC4-204ENST00000557945 PRR20AP86496 221 aa16.06■□□□□ 0.16
CASC4-204ENST00000557945 ZNF345Q14585 488 aa16.06■□□□□ 0.16
CASC4-204ENST00000557945 LCN12Q6JVE5 192 aa16.06■□□□□ 0.16
CASC4-204ENST00000557945 RBPMS2Q6ZRY4 209 aaKnown RBP16.06■□□□□ 0.16
CASC4-204ENST00000557945 KCNRGQ8N5I3 272 aa16.06■□□□□ 0.16
CASC4-204ENST00000557945 VSIRQ9H7M9 311 aa16.06■□□□□ 0.16
CASC4-204ENST00000557945 KCNIP2Q9NS61 270 aa16.06■□□□□ 0.16
CASC4-204ENST00000557945 HIGD1AQ9Y241 93 aa16.06■□□□□ 0.16
CASC4-204ENST00000557945 U3KQE9 123 aa16.06■□□□□ 0.16
CASC4-204ENST00000557945 A0A0D9SG52 128 aa16.05■□□□□ 0.16
CASC4-204ENST00000557945 IZUMO1RA6ND01 250 aa16.05■□□□□ 0.16
CASC4-204ENST00000557945 TAAR5O14804 337 aa16.05■□□□□ 0.16
CASC4-204ENST00000557945 COX7A2P2O60397 106 aa16.05■□□□□ 0.16
CASC4-204ENST00000557945 CXCL2P19875 107 aa16.05■□□□□ 0.16
CASC4-204ENST00000557945 S100A7P31151 101 aa16.05■□□□□ 0.16
CASC4-204ENST00000557945 ZFP69Q49AA0 526 aa16.05■□□□□ 0.16
CASC4-204ENST00000557945 PXDC1Q5TGL8 231 aa16.05■□□□□ 0.16
CASC4-204ENST00000557945 RPL7L1Q6DKI1 246 aaKnown RBP16.05■□□□□ 0.16
CASC4-204ENST00000557945 LAMTOR1Q6IAA8 161 aa16.05■□□□□ 0.16
CASC4-204ENST00000557945 TMEM61Q8N0U2 210 aa16.05■□□□□ 0.16
CASC4-204ENST00000557945 OR2K2Q8NGT1 345 aa16.05■□□□□ 0.16
CASC4-204ENST00000557945 NEURL2Q9BR09 285 aa16.05■□□□□ 0.16
CASC4-204ENST00000557945 GUCA2BQ16661 112 aa16.04■□□□□ 0.16
CASC4-204ENST00000557945 BEAN1Q3B7T3 259 aa16.04■□□□□ 0.16
CASC4-204ENST00000557945 TCF24Q7RTU0 167 aa16.04■□□□□ 0.16
CASC4-204ENST00000557945 HSD17B11Q8NBQ5 300 aa16.04■□□□□ 0.16
CASC4-204ENST00000557945 HYLS1Q96M11 299 aa16.04■□□□□ 0.16
CASC4-204ENST00000557945 ARV1Q9H2C2 271 aa16.04■□□□□ 0.16
CASC4-204ENST00000557945 ZMAT5Q9UDW3 170 aaKnown RBP16.04■□□□□ 0.16
CASC4-204ENST00000557945 IGKV3-7A0A075B6H7 116 aa16.03■□□□□ 0.16
CASC4-204ENST00000557945 BUB3O43684 328 aa16.03■□□□□ 0.16
CASC4-204ENST00000557945 KRTAP10-11P60412 298 aa16.03■□□□□ 0.16
CASC4-204ENST00000557945 RPL11P62913 178 aaKnown RBP16.03■□□□□ 0.16
CASC4-204ENST00000557945 C16orf54Q6UWD8 224 aa16.03■□□□□ 0.16
CASC4-204ENST00000557945 PATE2Q6UY27 113 aa16.03■□□□□ 0.16
CASC4-204ENST00000557945 S100A7AQ86SG5 101 aa16.03■□□□□ 0.16
CASC4-204ENST00000557945 OR1L4Q8NGR5 311 aa16.03■□□□□ 0.16
CASC4-204ENST00000557945 UHRF2Q96PU4 802 aa16.03■□□□□ 0.16
CASC4-204ENST00000557945 ARPC5LQ9BPX5 153 aa16.03■□□□□ 0.16
CASC4-204ENST00000557945 ELOA3CA0A087WX78 387 aaPredicted RBP16.02■□□□□ 0.16
CASC4-204ENST00000557945 EGFEM1PQ0D2K5 195 aa16.02■□□□□ 0.16
CASC4-204ENST00000557945 C10orf113Q5VZT2 155 aa16.02■□□□□ 0.16
CASC4-204ENST00000557945 SLC25A39Q9BZJ4 359 aaPredicted RBP16.02■□□□□ 0.16
CASC4-204ENST00000557945 SLC25A22Q9H936 323 aa16.02■□□□□ 0.16
CASC4-204ENST00000557945 DNAJC4Q9NNZ3 241 aa16.02■□□□□ 0.16
CASC4-204ENST00000557945 TRAV25A0A0B4J276 109 aa16.01■□□□□ 0.15
CASC4-204ENST00000557945 KANTRA0A1W2PQU2 76 aa16.01■□□□□ 0.15
CASC4-204ENST00000557945 ZNF98A6NK75 572 aa16.01■□□□□ 0.15
CASC4-204ENST00000557945 PFDN1O60925 122 aa16.01■□□□□ 0.15
CASC4-204ENST00000557945 FFAR4Q5NUL3 377 aa16.01■□□□□ 0.15
CASC4-204ENST00000557945 KPRPQ5T749 579 aaPredicted RBP16.01■□□□□ 0.15
CASC4-204ENST00000557945 TMUB2Q71RG4 321 aa16.01■□□□□ 0.15
CASC4-204ENST00000557945 OR8I2Q8N0Y5 310 aa16.01■□□□□ 0.15
CASC4-204ENST00000557945 TMEM37Q8WXS4 190 aa16.01■□□□□ 0.15
CASC4-204ENST00000557945 PFDN5Q99471 154 aa16.01■□□□□ 0.15
CASC4-204ENST00000557945 SCRT1Q9BWW7 348 aa16.01■□□□□ 0.15
CASC4-204ENST00000557945 ZNF256Q9Y2P7 627 aaPredicted RBP16.01■□□□□ 0.15
CASC4-204ENST00000557945 RFNGQ9Y644 331 aa16.01■□□□□ 0.15
CASC4-204ENST00000557945 H3BRN7 92 aa16■□□□□ 0.15
CASC4-204ENST00000557945 JTBO76095 146 aa16■□□□□ 0.15
CASC4-204ENST00000557945 CD5P06127 495 aa16■□□□□ 0.15
CASC4-204ENST00000557945 GP9P14770 177 aa16■□□□□ 0.15
CASC4-204ENST00000557945 LEMD1Q68G75 181 aa16■□□□□ 0.15
CASC4-204ENST00000557945 LINC00305Q7Z4B0 112 aa16■□□□□ 0.15
CASC4-204ENST00000557945 GLMPQ8WWB7 406 aa16■□□□□ 0.15
CASC4-204ENST00000557945 SHANK2-AS3Q9BTD1 123 aa16■□□□□ 0.15
CASC4-204ENST00000557945 CYTL1Q9NRR1 136 aa16■□□□□ 0.15
CASC4-204ENST00000557945 TIMM9Q9Y5J7 89 aa16■□□□□ 0.15
CASC4-204ENST00000557945 NOTCH1P46531 2555 aa16■□□□□ 0.15
CASC4-204ENST00000557945 HELTA6NFD8 242 aa16■□□□□ 0.15
CASC4-204ENST00000557945 TSPAN4O14817 238 aa16■□□□□ 0.15
CASC4-204ENST00000557945 BCL2L11O43521 198 aa16■□□□□ 0.15
CASC4-204ENST00000557945 ATP6V0CP27449 155 aa16■□□□□ 0.15
CASC4-204ENST00000557945 GCSAMLQ5JQS6 135 aa16■□□□□ 0.15
CASC4-204ENST00000557945 C1orf194Q5T5A4 169 aa16■□□□□ 0.15
CASC4-204ENST00000557945 FAM90A2PQ658T7 463 aa16■□□□□ 0.15
CASC4-204ENST00000557945 GBGT1Q8N5D6 347 aa16■□□□□ 0.15
CASC4-204ENST00000557945 ZNF785A8K8V0 405 aa15.99■□□□□ 0.15
CASC4-204ENST00000557945 TFPI2P48307 235 aa15.99■□□□□ 0.15
CASC4-204ENST00000557945 LGALSLQ3ZCW2 172 aaPredicted RBP15.99■□□□□ 0.15
CASC4-204ENST00000557945 SIGLEC15Q6ZMC9 328 aa15.99■□□□□ 0.15
CASC4-204ENST00000557945 GATAD1Q8WUU5 269 aa15.99■□□□□ 0.15
CASC4-204ENST00000557945 PRR25Q96S07 402 aa15.99■□□□□ 0.15
CASC4-204ENST00000557945 ZNF471Q9BX82 626 aaPredicted RBP15.99■□□□□ 0.15
CASC4-204ENST00000557945 SORL1Q92673 2214 aa15.98■□□□□ 0.15
CASC4-204ENST00000557945 PRB2P02812 416 aaPredicted RBP15.98■□□□□ 0.15
CASC4-204ENST00000557945 PAFAH1B2P68402 229 aa15.98■□□□□ 0.15
CASC4-204ENST00000557945 WFDC3Q8IUB2 231 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms