RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 PRR25Q96S07 402 aa10.28□□□□□ -0.76
SHMT2-234ENST00000557703 NEURL2Q9BR09 285 aa10.28□□□□□ -0.76
SHMT2-234ENST00000557703 PBDC1Q9BVG4 233 aa10.28□□□□□ -0.76
SHMT2-234ENST00000557703 IZUMO1RA6ND01 250 aa10.27□□□□□ -0.77
SHMT2-234ENST00000557703 LINC00869P0C866 280 aa10.27□□□□□ -0.77
SHMT2-234ENST00000557703 MEOX2P50222 304 aa10.27□□□□□ -0.77
SHMT2-234ENST00000557703 Q8N1Y9 231 aa10.27□□□□□ -0.77
SHMT2-234ENST00000557703 INO80EQ8NBZ0 244 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-234ENST00000557703 OR2T35Q8NGX2 323 aa10.27□□□□□ -0.77
SHMT2-234ENST00000557703 GLMPQ8WWB7 406 aa10.27□□□□□ -0.77
SHMT2-234ENST00000557703 AQP10Q96PS8 301 aa10.27□□□□□ -0.77
SHMT2-234ENST00000557703 PFDN5Q99471 154 aa10.27□□□□□ -0.77
SHMT2-234ENST00000557703 ATP5SQ99766 215 aa10.27□□□□□ -0.77
SHMT2-234ENST00000557703 HIGD1AQ9Y241 93 aa10.27□□□□□ -0.77
SHMT2-234ENST00000557703 C17orf112F2Z3M2 114 aa10.26□□□□□ -0.77
SHMT2-234ENST00000557703 DNASE2O00115 360 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-234ENST00000557703 IFNA5P01569 189 aa10.26□□□□□ -0.77
SHMT2-234ENST00000557703 ORM2P19652 201 aa10.26□□□□□ -0.77
SHMT2-234ENST00000557703 EDN2P20800 178 aa10.26□□□□□ -0.77
SHMT2-234ENST00000557703 CD81P60033 236 aa10.26□□□□□ -0.77
SHMT2-234ENST00000557703 OR2F1Q13607 317 aa10.26□□□□□ -0.77
SHMT2-234ENST00000557703 ZNF266Q14584 549 aa10.26□□□□□ -0.77
SHMT2-234ENST00000557703 DEFB121Q5J5C9 76 aa10.26□□□□□ -0.77
SHMT2-234ENST00000557703 ZNF709Q8N972 641 aa10.26□□□□□ -0.77
SHMT2-234ENST00000557703 OR1L4Q8NGR5 311 aa10.26□□□□□ -0.77
SHMT2-234ENST00000557703 PPP1R14BQ96C90 147 aa10.26□□□□□ -0.77
SHMT2-234ENST00000557703 MGST2Q99735 147 aa10.26□□□□□ -0.77
SHMT2-234ENST00000557703 ZNF98A6NK75 572 aa10.25□□□□□ -0.77
SHMT2-234ENST00000557703 APOHP02749 345 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-234ENST00000557703 GALR1P47211 349 aa10.25□□□□□ -0.77
SHMT2-234ENST00000557703 RPL11P62913 178 aaKnown RBP10.25□□□□□ -0.77
SHMT2-234ENST00000557703 PRR20EP86478 221 aa10.25□□□□□ -0.77
SHMT2-234ENST00000557703 PRR20CP86479 221 aa10.25□□□□□ -0.77
SHMT2-234ENST00000557703 PRR20DP86480 221 aa10.25□□□□□ -0.77
SHMT2-234ENST00000557703 PRR20BP86481 221 aa10.25□□□□□ -0.77
SHMT2-234ENST00000557703 PRR20AP86496 221 aa10.25□□□□□ -0.77
SHMT2-234ENST00000557703 OPCMLQ14982 345 aa10.25□□□□□ -0.77
SHMT2-234ENST00000557703 SIGLEC15Q6ZMC9 328 aa10.25□□□□□ -0.77
SHMT2-234ENST00000557703 Q6ZNX1 250 aa10.25□□□□□ -0.77
SHMT2-234ENST00000557703 OR8I2Q8N0Y5 310 aa10.25□□□□□ -0.77
SHMT2-234ENST00000557703 OR1B1Q8NGR6 318 aa10.25□□□□□ -0.77
SHMT2-234ENST00000557703 GATAD1Q8WUU5 269 aa10.25□□□□□ -0.77
SHMT2-234ENST00000557703 B9D2Q9BPU9 175 aa10.25□□□□□ -0.77
SHMT2-234ENST00000557703 GGTLC1Q9BX51 225 aa10.25□□□□□ -0.77
SHMT2-234ENST00000557703 MS4A6AQ9H2W1 248 aa10.25□□□□□ -0.77
SHMT2-234ENST00000557703 DNAJC4Q9NNZ3 241 aa10.25□□□□□ -0.77
SHMT2-234ENST00000557703 IGHV3-49A0A0A0MS15 119 aa10.24□□□□□ -0.77
SHMT2-234ENST00000557703 UBE2L5PA0A1B0GUS4 154 aa10.24□□□□□ -0.77
SHMT2-234ENST00000557703 OR11H12B2RN74 326 aa10.24□□□□□ -0.77
SHMT2-234ENST00000557703 PRB2P02812 416 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-234ENST00000557703 NHLRC4P0CG21 123 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-234ENST00000557703 RPL7P18124 248 aaKnown RBP10.24□□□□□ -0.77
SHMT2-234ENST00000557703 FGF7P21781 194 aa10.24□□□□□ -0.77
SHMT2-234ENST00000557703 B2MP61769 119 aa10.24□□□□□ -0.77
SHMT2-234ENST00000557703 SCGB1C1Q8TD33 95 aa10.24□□□□□ -0.77
SHMT2-234ENST00000557703 SHANK2-AS3Q9BTD1 123 aa10.24□□□□□ -0.77
SHMT2-234ENST00000557703 NPCDR1Q9BY65 106 aa10.24□□□□□ -0.77
SHMT2-234ENST00000557703 SLC25A39Q9BZJ4 359 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-234ENST00000557703 WDR61Q9GZS3 305 aaKnown RBP10.24□□□□□ -0.77
SHMT2-234ENST00000557703 ARL6Q9H0F7 186 aa10.24□□□□□ -0.77
SHMT2-234ENST00000557703 ARV1Q9H2C2 271 aa10.24□□□□□ -0.77
SHMT2-234ENST00000557703 TUBA4BQ9H853 241 aa10.24□□□□□ -0.77
SHMT2-234ENST00000557703 NRN1Q9NPD7 142 aa10.24□□□□□ -0.77
SHMT2-234ENST00000557703 SLC39A9Q9NUM3 307 aa10.24□□□□□ -0.77
SHMT2-234ENST00000557703 C19orf73Q9NVV2 129 aa10.24□□□□□ -0.77
SHMT2-234ENST00000557703 IGHV3OR16-13A0A075B7E8 117 aa10.23□□□□□ -0.77
SHMT2-234ENST00000557703 IGHV3-74A0A0B4J1X5 117 aa10.23□□□□□ -0.77
SHMT2-234ENST00000557703 TAAR5O14804 337 aa10.23□□□□□ -0.77
SHMT2-234ENST00000557703 COX7A2P2O60397 106 aa10.23□□□□□ -0.77
SHMT2-234ENST00000557703 OR5G3P0C626 314 aa10.23□□□□□ -0.77
SHMT2-234ENST00000557703 IGHV4-30-4P0DP06 118 aa10.23□□□□□ -0.77
SHMT2-234ENST00000557703 GATA2P23769 480 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-234ENST00000557703 SNRPD3P62318 126 aaKnown RBP10.23□□□□□ -0.77
SHMT2-234ENST00000557703 CLINT1Q14677 625 aa10.23□□□□□ -0.77
SHMT2-234ENST00000557703 TMEM182Q6ZP80 229 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-234ENST00000557703 TNFSF18Q9UNG2 199 aa10.23□□□□□ -0.77
SHMT2-234ENST00000557703 HMSDA8MTL9 139 aa10.22□□□□□ -0.77
SHMT2-234ENST00000557703 H3BRN7 92 aa10.22□□□□□ -0.77
SHMT2-234ENST00000557703 K7EQG2 157 aa10.22□□□□□ -0.77
SHMT2-234ENST00000557703 CD7P09564 240 aa10.22□□□□□ -0.77
SHMT2-234ENST00000557703 ID1P41134 155 aa10.22□□□□□ -0.77
SHMT2-234ENST00000557703 C10orf113Q5VZT2 155 aa10.22□□□□□ -0.77
SHMT2-234ENST00000557703 DCANP1Q8TF63 244 aa10.22□□□□□ -0.77
SHMT2-234ENST00000557703 IGHV3-66A0A0C4DH42 116 aa10.21□□□□□ -0.77
SHMT2-234ENST00000557703 CXCL2P19875 107 aa10.21□□□□□ -0.77
SHMT2-234ENST00000557703 LINC00305Q7Z4B0 112 aa10.21□□□□□ -0.77
SHMT2-234ENST00000557703 BPIFA4PQ86YQ2 179 aa10.21□□□□□ -0.77
SHMT2-234ENST00000557703 STXBP6Q8NFX7 210 aa10.21□□□□□ -0.77
SHMT2-234ENST00000557703 CLEC5AQ9NY25 188 aa10.21□□□□□ -0.77
SHMT2-234ENST00000557703 TIMM9Q9Y5J7 89 aa10.21□□□□□ -0.77
SHMT2-234ENST00000557703 PXMP4Q9Y6I8 212 aa10.21□□□□□ -0.77
SHMT2-234ENST00000557703 FXYD6-FXYD2A0A087WZ82 144 aa10.2□□□□□ -0.78
SHMT2-234ENST00000557703 KIR2DL5BA0A0G2JN68 375 aa10.2□□□□□ -0.78
SHMT2-234ENST00000557703 KIR2DL5BA0A0G2JPC4 375 aa10.2□□□□□ -0.78
SHMT2-234ENST00000557703 ISLRO14498 428 aa10.2□□□□□ -0.78
SHMT2-234ENST00000557703 ZNF345Q14585 488 aa10.2□□□□□ -0.78
SHMT2-234ENST00000557703 ODF3L2Q3SX64 289 aa10.2□□□□□ -0.78
SHMT2-234ENST00000557703 SPATA31B1PQ5VZV4 182 aa10.2□□□□□ -0.78
SHMT2-234ENST00000557703 MIC13Q5XKP0 118 aa10.2□□□□□ -0.78
SHMT2-234ENST00000557703 PATE2Q6UY27 113 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms