RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 EXOC3-AS1Q8N2X6 119 aa9.11□□□□□ -0.95
SRP54-213ENST00000556994 ZADH2Q8N4Q0 377 aa9.11□□□□□ -0.95
SRP54-213ENST00000556994 LOXL4Q96JB6 756 aa9.11□□□□□ -0.95
SRP54-213ENST00000556994 CHEK1O14757 476 aa9.1□□□□□ -0.95
SRP54-213ENST00000556994 NUDT3O95989 172 aa9.1□□□□□ -0.95
SRP54-213ENST00000556994 GP9P14770 177 aa9.1□□□□□ -0.95
SRP54-213ENST00000556994 TNFRSF1AP19438 455 aa9.1□□□□□ -0.95
SRP54-213ENST00000556994 VMA21Q3ZAQ7 101 aa9.1□□□□□ -0.95
SRP54-213ENST00000556994 PRNTQ86SH4 94 aa9.1□□□□□ -0.95
SRP54-213ENST00000556994 WFDC8Q8IUA0 241 aa9.1□□□□□ -0.95
SRP54-213ENST00000556994 C5orf17Q8NAS9 161 aa9.1□□□□□ -0.95
SRP54-213ENST00000556994 STXBP6Q8NFX7 210 aa9.1□□□□□ -0.95
SRP54-213ENST00000556994 OR4A5Q8NH83 315 aa9.1□□□□□ -0.95
SRP54-213ENST00000556994 FMC1Q96HJ9 113 aa9.1□□□□□ -0.95
SRP54-213ENST00000556994 BSNQ9UPA5 3926 aa9.1□□□□□ -0.95
SRP54-213ENST00000556994 CACNA1HO95180 2353 aa9.1□□□□□ -0.95
SRP54-213ENST00000556994 TPRP12270 2363 aaKnown RBP9.1□□□□□ -0.95
SRP54-213ENST00000556994 PPIAL4EA0A075B759 164 aa9.1□□□□□ -0.95
SRP54-213ENST00000556994 C17orf100A8MU93 164 aa9.1□□□□□ -0.95
SRP54-213ENST00000556994 PPIAL4DF5H284 164 aa9.1□□□□□ -0.95
SRP54-213ENST00000556994 PPIAL4FP0DN26 164 aa9.1□□□□□ -0.95
SRP54-213ENST00000556994 COL8A1P27658 744 aa9.1□□□□□ -0.95
SRP54-213ENST00000556994 RBX1P62877 108 aa9.1□□□□□ -0.95
SRP54-213ENST00000556994 VAMP3Q15836 100 aa9.1□□□□□ -0.95
SRP54-213ENST00000556994 C1orf185Q5T7R7 199 aa9.1□□□□□ -0.95
SRP54-213ENST00000556994 RBPMS2Q6ZRY4 209 aaKnown RBP9.1□□□□□ -0.95
SRP54-213ENST00000556994 TMEM186Q96B77 213 aa9.1□□□□□ -0.95
SRP54-213ENST00000556994 CRXO43186 299 aaPredicted RBP9.09□□□□□ -0.95
SRP54-213ENST00000556994 FTH1P19P0C7X4 201 aa9.09□□□□□ -0.95
SRP54-213ENST00000556994 CEACAM8P31997 349 aaPredicted RBP9.09□□□□□ -0.95
SRP54-213ENST00000556994 LYZP61626 148 aa9.09□□□□□ -0.95
SRP54-213ENST00000556994 ADIPOQQ15848 244 aa9.09□□□□□ -0.95
SRP54-213ENST00000556994 GOLT1AQ6ZVE7 132 aa9.09□□□□□ -0.95
SRP54-213ENST00000556994 OR4C5Q8NGB2 326 aa9.09□□□□□ -0.95
SRP54-213ENST00000556994 CTSZQ9UBR2 303 aa9.09□□□□□ -0.95
SRP54-213ENST00000556994 LOC102724200A0A096LPH7 203 aaPredicted RBP9.09□□□□□ -0.95
SRP54-213ENST00000556994 K7EM74 188 aa9.09□□□□□ -0.95
SRP54-213ENST00000556994 NDUFB3O43676 98 aa9.09□□□□□ -0.95
SRP54-213ENST00000556994 CRYGCP07315 174 aa9.09□□□□□ -0.95
SRP54-213ENST00000556994 CHCHD1Q96BP2 118 aaKnown RBP9.09□□□□□ -0.95
SRP54-213ENST00000556994 TRGV9Q99603 122 aa9.09□□□□□ -0.95
SRP54-213ENST00000556994 TMUB1Q9BVT8 246 aa9.09□□□□□ -0.95
SRP54-213ENST00000556994 POLEQ07864 2286 aa9.08□□□□□ -0.96
SRP54-213ENST00000556994 TTC28Q96AY4 2481 aa9.08□□□□□ -0.96
SRP54-213ENST00000556994 MALRD1Q5VYJ5 2156 aa9.08□□□□□ -0.96
SRP54-213ENST00000556994 IGHV2-70DA0A0C4DH43 119 aa9.08□□□□□ -0.96
SRP54-213ENST00000556994 TMEM178BH3BS89 294 aa9.08□□□□□ -0.96
SRP54-213ENST00000556994 RPL27AP46776 148 aaKnown RBP9.08□□□□□ -0.96
SRP54-213ENST00000556994 C3orf36Q3SXR2 165 aa9.08□□□□□ -0.96
SRP54-213ENST00000556994 ETFRF1Q6IPR1 90 aa9.08□□□□□ -0.96
SRP54-213ENST00000556994 C8orf46Q8TAG6 207 aa9.08□□□□□ -0.96
SRP54-213ENST00000556994 ST20Q9HBF5 79 aa9.08□□□□□ -0.96
SRP54-213ENST00000556994 MUC21A0A0G2JKD1 596 aa9.08□□□□□ -0.96
SRP54-213ENST00000556994 MUC21A0A140T8X8 626 aa9.08□□□□□ -0.96
SRP54-213ENST00000556994 CBY3A6NI87 242 aa9.08□□□□□ -0.96
SRP54-213ENST00000556994 SNAI2O43623 268 aa9.08□□□□□ -0.96
SRP54-213ENST00000556994 PSG1P11464 419 aa9.08□□□□□ -0.96
SRP54-213ENST00000556994 FOXE3Q13461 319 aa9.08□□□□□ -0.96
SRP54-213ENST00000556994 LRRC10Q5BKY1 277 aa9.08□□□□□ -0.96
SRP54-213ENST00000556994 MUC21Q5SSG8 566 aa9.08□□□□□ -0.96
SRP54-213ENST00000556994 SLC25A34Q6PIV7 304 aa9.08□□□□□ -0.96
SRP54-213ENST00000556994 TMEM108Q6UXF1 575 aa9.08□□□□□ -0.96
SRP54-213ENST00000556994 TMEM116Q8NCL8 245 aa9.08□□□□□ -0.96
SRP54-213ENST00000556994 C22orf15Q8WYQ4 148 aa9.08□□□□□ -0.96
SRP54-213ENST00000556994 SMIM12Q96EX1 92 aa9.08□□□□□ -0.96
SRP54-213ENST00000556994 C17orf77Q96MU5 243 aa9.08□□□□□ -0.96
SRP54-213ENST00000556994 GVINP1Q7Z2Y8 2422 aa9.07□□□□□ -0.96
SRP54-213ENST00000556994 OR2T8A6NH00 312 aa9.07□□□□□ -0.96
SRP54-213ENST00000556994 HTR1DP28221 377 aa9.07□□□□□ -0.96
SRP54-213ENST00000556994 LOXP28300 417 aaPredicted RBP9.07□□□□□ -0.96
SRP54-213ENST00000556994 BSPH1Q075Z2 132 aa9.07□□□□□ -0.96
SRP54-213ENST00000556994 RNF151Q2KHN1 245 aa9.07□□□□□ -0.96
SRP54-213ENST00000556994 CT83Q5H943 113 aa9.07□□□□□ -0.96
SRP54-213ENST00000556994 FAM162BQ5T6X4 162 aa9.07□□□□□ -0.96
SRP54-213ENST00000556994 Q86TA4 180 aa9.07□□□□□ -0.96
SRP54-213ENST00000556994 NDFIP1Q9BT67 221 aa9.07□□□□□ -0.96
SRP54-213ENST00000556994 MAP1LC3CQ9BXW4 147 aa9.07□□□□□ -0.96
SRP54-213ENST00000556994 TMEM191AQ9H0A3 160 aa9.07□□□□□ -0.96
SRP54-213ENST00000556994 ZNF492Q9P255 531 aa9.07□□□□□ -0.96
SRP54-213ENST00000556994 SH3BGRL2Q9UJC5 107 aa9.07□□□□□ -0.96
SRP54-213ENST00000556994 RNF24Q9Y225 148 aa9.07□□□□□ -0.96
SRP54-213ENST00000556994 HIGD1AQ9Y241 93 aa9.07□□□□□ -0.96
SRP54-213ENST00000556994 ZGRF1Q86YA3 2104 aa9.07□□□□□ -0.96
SRP54-213ENST00000556994 A0A087X0K7 114 aa9.06□□□□□ -0.96
SRP54-213ENST00000556994 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.06□□□□□ -0.96
SRP54-213ENST00000556994 TAX1BP3O14907 124 aa9.06□□□□□ -0.96
SRP54-213ENST00000556994 IGLV2-11P01706 119 aa9.06□□□□□ -0.96
SRP54-213ENST00000556994 ARMS2P0C7Q2 107 aa9.06□□□□□ -0.96
SRP54-213ENST00000556994 BVES-AS1Q5T3Y7 98 aa9.06□□□□□ -0.96
SRP54-213ENST00000556994 PRSS33Q8NF86 280 aa9.06□□□□□ -0.96
SRP54-213ENST00000556994 NUP37Q8NFH4 326 aa9.06□□□□□ -0.96
SRP54-213ENST00000556994 SRSF12Q8WXF0 261 aaKnown RBP9.06□□□□□ -0.96
SRP54-213ENST00000556994 TPPP3Q9BW30 176 aa9.06□□□□□ -0.96
SRP54-213ENST00000556994 AKAP13Q12802 2813 aa9.06□□□□□ -0.96
SRP54-213ENST00000556994 PIEZO2Q9H5I5 2752 aa9.06□□□□□ -0.96
SRP54-213ENST00000556994 ZNF785A8K8V0 405 aa9.06□□□□□ -0.96
SRP54-213ENST00000556994 HSBP1L1C9JCN9 74 aa9.06□□□□□ -0.96
SRP54-213ENST00000556994 APOHP02749 345 aaPredicted RBP9.06□□□□□ -0.96
SRP54-213ENST00000556994 RBP4P02753 201 aa9.06□□□□□ -0.96
SRP54-213ENST00000556994 IGHV1-8P0DP01 117 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms