RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 ST20Q9HBF5 79 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 HRNRQ86YZ3 2850 aaPredicted RBP4.16□□□□□ -1.74
TMEM260-210ENST00000556422 TET2Q6N021 2002 aaPredicted RBP4.16□□□□□ -1.74
TMEM260-210ENST00000556422 DYSFO75923 2080 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 PRSS29PA6NIE9 313 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 FAM157AC9JC47 383 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 GPR137BO60478 399 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 NKX2-1P43699 371 aaPredicted RBP4.16□□□□□ -1.74
TMEM260-210ENST00000556422 IZUMO4Q1ZYL8 232 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 CLEC12BQ2HXU8 276 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 STUMQ69YW2 141 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 C16orf82Q7Z2V1 217 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 OR51H1Q8NH63 302 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 PLPPR2Q96GM1 343 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 SH3BGRL3Q9H299 93 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 CXXC4Q9H2H0 198 aa4.16□□□□□ -1.74
TMEM260-210ENST00000556422 SPANXB1Q9NS25 103 aaPredicted RBP4.16□□□□□ -1.74
TMEM260-210ENST00000556422 PKDREJQ9NTG1 2253 aa4.15□□□□□ -1.74
TMEM260-210ENST00000556422 CSMD1Q96PZ7 3565 aa4.15□□□□□ -1.74
TMEM260-210ENST00000556422 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.15□□□□□ -1.74
TMEM260-210ENST00000556422 C12orf77C9JDV5 145 aa4.15□□□□□ -1.74
TMEM260-210ENST00000556422 RPL13AP40429 203 aaKnown RBP4.15□□□□□ -1.74
TMEM260-210ENST00000556422 EIF4EBP1Q13541 118 aaPredicted RBP4.15□□□□□ -1.74
TMEM260-210ENST00000556422 PPP1R27Q86WC6 154 aa4.15□□□□□ -1.74
TMEM260-210ENST00000556422 Q8NA96 180 aa4.15□□□□□ -1.74
TMEM260-210ENST00000556422 YPEL4Q96NS1 127 aa4.15□□□□□ -1.74
TMEM260-210ENST00000556422 SCRT1Q9BWW7 348 aa4.15□□□□□ -1.74
TMEM260-210ENST00000556422 ASH1LQ9NR48 2969 aaKnown RBP4.15□□□□□ -1.74
TMEM260-210ENST00000556422 FAM24AA6NFZ4 105 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 NPIPB6E9PJ23 425 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 SSSCA1O60232 199 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 NXPH3O95157 252 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 IGKV1-5P01602 117 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 NDUFV3P56181 108 aaKnown RBP4.15□□□□□ -1.75
TMEM260-210ENST00000556422 BRWD1-AS2P59051 145 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 MSMO1Q15800 293 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 ZNF718Q3SXZ3 478 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 C9orf153Q5TBE3 101 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 DRAM1Q8N682 238 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 CD177Q8N6Q3 437 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 TPRX1Q8N7U7 411 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 OR1L1Q8NH94 360 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 VSTM2AQ8TAG5 236 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 RAB37Q96AX2 223 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 C1orf159Q96HA4 380 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 PARP11Q9NR21 331 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 ITPR1Q14643 2758 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 ZNF737O75373 536 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 C1QL1O75973 258 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 VDAC2P45880 294 aaPredicted RBP4.15□□□□□ -1.75
TMEM260-210ENST00000556422 PNRC1Q12796 327 aaPredicted RBP4.15□□□□□ -1.75
TMEM260-210ENST00000556422 ETDBQ3ZM63 59 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 SLC35E4Q6ICL7 350 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 Q71RC1 249 aaPredicted RBP4.15□□□□□ -1.75
TMEM260-210ENST00000556422 TMEM252Q8N6L7 170 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 OR4F5Q8NH21 305 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 C1RLQ9NZP8 487 aa4.15□□□□□ -1.75
TMEM260-210ENST00000556422 IGLV3-9A0A075B6K5 115 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 IGKV1D-17A0A075B6S4 117 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 GRIFINA4D1Z8 144 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 SRRM5B3KS81 715 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 SEC11BP0C7V7 166 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 DANCRP0C864 163 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 ATOH7Q8N100 152 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 GCSAMQ8N6F7 178 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 FAM57AQ8TBR7 257 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 ABHD14BQ96IU4 210 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 IMMP2LQ96T52 175 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 WNT10AQ9GZT5 417 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 LOC102723971A0A1B0GUV8 181 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 TMEM30CPA0ZSE6 113 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 IGHV3-13P01766 116 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 THBDP07204 575 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 IGLC6P0CF74 106 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 RPL30P62888 115 aaKnown RBP4.14□□□□□ -1.75
TMEM260-210ENST00000556422 FAM27E3Q08E93 113 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 LINC01620Q4KN68 170 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 Q6ZUT4 128 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 HAPLN4Q86UW8 402 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 ABHD12Q8N2K0 398 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 TEX45Q8NA69 505 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 OSR1Q8TAX0 266 aaPredicted RBP4.14□□□□□ -1.75
TMEM260-210ENST00000556422 SCGB1C1Q8TD33 95 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 TMEM170AQ8WVE7 144 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 SPIN2AQ99865 258 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 SPIN2BQ9BPZ2 258 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 ZNF257Q9Y2Q1 563 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 VPS13CQ709C8 3753 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 ARFGEF3Q5TH69 2177 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 SPTA1P02549 2419 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 RBFOX3A6NFN3 312 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 C15orf65H3BRN8 121 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 M0R1B8 84 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 CXorf1O96002 111 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 PMCHL1Q16048 86 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 MRPL55Q7Z7F7 128 aaKnown RBP4.14□□□□□ -1.75
TMEM260-210ENST00000556422 LRRC29Q8WV35 223 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 AGMATQ9BSE5 352 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 DCTN5Q9BTE1 182 aa4.14□□□□□ -1.75
TMEM260-210ENST00000556422 TECRQ9NZ01 308 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms