RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 B9A039 149 aa12.03□□□□□ -0.48
CUX1-215ENST00000556210 C3orf79P0CE67 100 aa12.03□□□□□ -0.48
CUX1-215ENST00000556210 FAM162BQ5T6X4 162 aa12.03□□□□□ -0.48
CUX1-215ENST00000556210 TMEM14BQ9NUH8 114 aa12.03□□□□□ -0.48
CUX1-215ENST00000556210 ORM1P02763 201 aa12.03□□□□□ -0.48
CUX1-215ENST00000556210 CEACAM3P40198 252 aa12.03□□□□□ -0.48
CUX1-215ENST00000556210 YPEL3P61236 119 aaPredicted RBP12.03□□□□□ -0.48
CUX1-215ENST00000556210 HIVEP3Q5T1R4 2406 aa12.03□□□□□ -0.48
CUX1-215ENST00000556210 A0A1B0GWJ7 208 aa12.03□□□□□ -0.48
CUX1-215ENST00000556210 LINC00614P0C842 121 aa12.03□□□□□ -0.48
CUX1-215ENST00000556210 IGFL4Q6B9Z1 124 aa12.03□□□□□ -0.48
CUX1-215ENST00000556210 SSX8Q7RTT4 187 aa12.03□□□□□ -0.48
CUX1-215ENST00000556210 CENPVQ7Z7K6 275 aaPredicted RBP12.03□□□□□ -0.48
CUX1-215ENST00000556210 A0A1W2PPI3 338 aa12.02□□□□□ -0.48
CUX1-215ENST00000556210 LGALS7P47929 136 aa12.02□□□□□ -0.48
CUX1-215ENST00000556210 MEF2CQ06413 473 aaPredicted RBP12.02□□□□□ -0.48
CUX1-215ENST00000556210 MCRIP2Q9BUT9 160 aaKnown RBP12.02□□□□□ -0.48
CUX1-215ENST00000556210 TMEM191AQ9H0A3 160 aa12.02□□□□□ -0.48
CUX1-215ENST00000556210 ZNF672Q499Z4 452 aaPredicted RBP12.02□□□□□ -0.49
CUX1-215ENST00000556210 GGTLC3B5MD39 225 aa12.02□□□□□ -0.49
CUX1-215ENST00000556210 IGHV2-26A0A0B4J1V2 119 aa12.02□□□□□ -0.49
CUX1-215ENST00000556210 LIPFP07098 398 aa12.02□□□□□ -0.49
CUX1-215ENST00000556210 TPTE2P1Q5T6R2 138 aa12.02□□□□□ -0.49
CUX1-215ENST00000556210 IGLV3-9A0A075B6K5 115 aa12.01□□□□□ -0.49
CUX1-215ENST00000556210 LOC105371242A0A075B767 164 aa12.01□□□□□ -0.49
CUX1-215ENST00000556210 CTSZQ9UBR2 303 aa12.01□□□□□ -0.49
CUX1-215ENST00000556210 DCHS1Q96JQ0 3298 aa12.01□□□□□ -0.49
CUX1-215ENST00000556210 SNAI2O43623 268 aa12.01□□□□□ -0.49
CUX1-215ENST00000556210 BTF3P20290 206 aaKnown RBP12.01□□□□□ -0.49
CUX1-215ENST00000556210 FA2HQ7L5A8 372 aa12.01□□□□□ -0.49
CUX1-215ENST00000556210 FNDC4Q9H6D8 234 aaPredicted RBP12.01□□□□□ -0.49
CUX1-215ENST00000556210 OSTCQ9NRP0 149 aa12.01□□□□□ -0.49
CUX1-215ENST00000556210 CDC42EP3Q9UKI2 254 aa12.01□□□□□ -0.49
CUX1-215ENST00000556210 DSCAMO60469 2012 aa12□□□□□ -0.49
CUX1-215ENST00000556210 IGKV1OR2-108A0A075B7D4 117 aa12□□□□□ -0.49
CUX1-215ENST00000556210 TNRC18O15417 2968 aaPredicted RBP12□□□□□ -0.49
CUX1-215ENST00000556210 LEPROTL1O95214 131 aa12□□□□□ -0.49
CUX1-215ENST00000556210 PSG1P11464 419 aa12□□□□□ -0.49
CUX1-215ENST00000556210 CORTO00230 105 aa12□□□□□ -0.49
CUX1-215ENST00000556210 Q9H3A6 140 aa12□□□□□ -0.49
CUX1-215ENST00000556210 A0A1W2PS18 150 aa12□□□□□ -0.49
CUX1-215ENST00000556210 TCRBV4S1A1TA0A5B7 111 aa12□□□□□ -0.49
CUX1-215ENST00000556210 A8MWL6 223 aa12□□□□□ -0.49
CUX1-215ENST00000556210 NDUFS7O75251 213 aa12□□□□□ -0.49
CUX1-215ENST00000556210 ZNF138P52744 262 aa12□□□□□ -0.49
CUX1-215ENST00000556210 TCF15Q12870 199 aa12□□□□□ -0.49
CUX1-215ENST00000556210 TEX43Q6ZNM6 134 aa12□□□□□ -0.49
CUX1-215ENST00000556210 STXBP6Q8NFX7 210 aa12□□□□□ -0.49
CUX1-215ENST00000556210 OR2T8A6NH00 312 aa11.99□□□□□ -0.49
CUX1-215ENST00000556210 C9JCJ5 164 aa11.99□□□□□ -0.49
CUX1-215ENST00000556210 M0R3E3 92 aa11.99□□□□□ -0.49
CUX1-215ENST00000556210 NUDT3O95989 172 aa11.99□□□□□ -0.49
CUX1-215ENST00000556210 CX3CL1P78423 397 aa11.99□□□□□ -0.49
CUX1-215ENST00000556210 LY6EQ16553 131 aa11.99□□□□□ -0.49
CUX1-215ENST00000556210 Q6ZVH6 145 aa11.99□□□□□ -0.49
CUX1-215ENST00000556210 BPIFA4PQ86YQ2 179 aa11.99□□□□□ -0.49
CUX1-215ENST00000556210 CIARTQ8N365 385 aaPredicted RBP11.99□□□□□ -0.49
CUX1-215ENST00000556210 C5orf17Q8NAS9 161 aa11.99□□□□□ -0.49
CUX1-215ENST00000556210 OR8A1Q8NGG7 326 aa11.99□□□□□ -0.49
CUX1-215ENST00000556210 CACNG8Q8WXS5 425 aa11.99□□□□□ -0.49
CUX1-215ENST00000556210 DMXL1Q9Y485 3027 aa11.99□□□□□ -0.49
CUX1-215ENST00000556210 K7EN84 100 aa11.99□□□□□ -0.49
CUX1-215ENST00000556210 CEACAM8P31997 349 aaPredicted RBP11.99□□□□□ -0.49
CUX1-215ENST00000556210 C2orf83Q53S99 150 aa11.99□□□□□ -0.49
CUX1-215ENST00000556210 WFDC3Q8IUB2 231 aa11.99□□□□□ -0.49
CUX1-215ENST00000556210 OR4A5Q8NH83 315 aa11.99□□□□□ -0.49
CUX1-215ENST00000556210 DPM3Q9P2X0 92 aa11.99□□□□□ -0.49
CUX1-215ENST00000556210 LRRK2Q5S007 2527 aa11.99□□□□□ -0.49
CUX1-215ENST00000556210 NAV2Q8IVL1 2488 aa11.99□□□□□ -0.49
CUX1-215ENST00000556210 IZUMO1RA6ND01 250 aa11.99□□□□□ -0.49
CUX1-215ENST00000556210 OR10J3Q5JRS4 329 aa11.99□□□□□ -0.49
CUX1-215ENST00000556210 FAM168AQ92567 244 aa11.99□□□□□ -0.49
CUX1-215ENST00000556210 ALKBH7Q9BT30 221 aaPredicted RBP11.99□□□□□ -0.49
CUX1-215ENST00000556210 OR4C46A6NHA9 309 aa11.98□□□□□ -0.49
CUX1-215ENST00000556210 LOXP28300 417 aaPredicted RBP11.98□□□□□ -0.49
CUX1-215ENST00000556210 STPG4Q8N801 248 aa11.98□□□□□ -0.49
CUX1-215ENST00000556210 NUDT10Q8NFP7 164 aa11.98□□□□□ -0.49
CUX1-215ENST00000556210 NUDT11Q96G61 164 aa11.98□□□□□ -0.49
CUX1-215ENST00000556210 RCHY1Q96PM5 261 aa11.98□□□□□ -0.49
CUX1-215ENST00000556210 MAP1LC3CQ9BXW4 147 aa11.98□□□□□ -0.49
CUX1-215ENST00000556210 PPP1R14DQ9NXH3 145 aa11.98□□□□□ -0.49
CUX1-215ENST00000556210 COL4A2P08572 1712 aa11.98□□□□□ -0.49
CUX1-215ENST00000556210 Q0VG73 95 aa11.98□□□□□ -0.49
CUX1-215ENST00000556210 IGFL2Q6UWQ7 119 aa11.98□□□□□ -0.49
CUX1-215ENST00000556210 PRSS33Q8NF86 280 aa11.98□□□□□ -0.49
CUX1-215ENST00000556210 TMEM70Q9BUB7 260 aa11.98□□□□□ -0.49
CUX1-215ENST00000556210 IGHV1-3A0A0C4DH29 117 aa11.98□□□□□ -0.49
CUX1-215ENST00000556210 THYN1Q9P016 225 aa11.98□□□□□ -0.49
CUX1-215ENST00000556210 ZNF257Q9Y2Q1 563 aa11.98□□□□□ -0.49
CUX1-215ENST00000556210 AKAP13Q12802 2813 aa11.98□□□□□ -0.49
CUX1-215ENST00000556210 ARL3P36405 182 aa11.97□□□□□ -0.49
CUX1-215ENST00000556210 TMPRSS3P57727 454 aa11.97□□□□□ -0.49
CUX1-215ENST00000556210 LHBP01229 141 aa11.97□□□□□ -0.49
CUX1-215ENST00000556210 OR5AL1P0C617 328 aa11.97□□□□□ -0.49
CUX1-215ENST00000556210 FXYD7P58549 80 aa11.97□□□□□ -0.49
CUX1-215ENST00000556210 SLC25A34Q6PIV7 304 aa11.97□□□□□ -0.49
CUX1-215ENST00000556210 EPDR1Q9UM22 224 aa11.97□□□□□ -0.49
CUX1-215ENST00000556210 THBDP07204 575 aa11.97□□□□□ -0.49
CUX1-215ENST00000556210 PPIFP30405 207 aaKnown RBP11.97□□□□□ -0.49
CUX1-215ENST00000556210 NHLH1Q02575 133 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms