RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 OR1L4Q8NGR5 311 aa5.8□□□□□ -1.48
TDP1-214ENST00000556063 OR1B1Q8NGR6 318 aa5.8□□□□□ -1.48
TDP1-214ENST00000556063 PFDN5Q99471 154 aa5.8□□□□□ -1.48
TDP1-214ENST00000556063 MGST2Q99735 147 aa5.8□□□□□ -1.48
TDP1-214ENST00000556063 NEURL2Q9BR09 285 aa5.8□□□□□ -1.48
TDP1-214ENST00000556063 RHPN1-AS1Q9BWJ2 59 aa5.8□□□□□ -1.48
TDP1-214ENST00000556063 GGTLC1Q9BX51 225 aa5.8□□□□□ -1.48
TDP1-214ENST00000556063 NPCDR1Q9BY65 106 aa5.8□□□□□ -1.48
TDP1-214ENST00000556063 HIGD1AQ9Y241 93 aa5.8□□□□□ -1.48
TDP1-214ENST00000556063 PXMP4Q9Y6I8 212 aa5.8□□□□□ -1.48
TDP1-214ENST00000556063 IGHV3-49A0A0A0MS15 119 aa5.79□□□□□ -1.48
TDP1-214ENST00000556063 KANTRA0A1W2PQU2 76 aa5.79□□□□□ -1.48
TDP1-214ENST00000556063 CHEK1O14757 476 aa5.79□□□□□ -1.48
TDP1-214ENST00000556063 PFDN1O60925 122 aa5.79□□□□□ -1.48
TDP1-214ENST00000556063 JTBO76095 146 aa5.79□□□□□ -1.48
TDP1-214ENST00000556063 GATA2P23769 480 aaPredicted RBP5.79□□□□□ -1.48
TDP1-214ENST00000556063 B2MP61769 119 aa5.79□□□□□ -1.48
TDP1-214ENST00000556063 RPL11P62913 178 aaKnown RBP5.79□□□□□ -1.48
TDP1-214ENST00000556063 PAFAH1B2P68402 229 aa5.79□□□□□ -1.48
TDP1-214ENST00000556063 DEFB114Q30KQ6 69 aa5.79□□□□□ -1.48
TDP1-214ENST00000556063 C1orf194Q5T5A4 169 aa5.79□□□□□ -1.48
TDP1-214ENST00000556063 SAMD5Q5TGI4 173 aa5.79□□□□□ -1.48
TDP1-214ENST00000556063 MIC13Q5XKP0 118 aa5.79□□□□□ -1.48
TDP1-214ENST00000556063 KCNRGQ8N5I3 272 aa5.79□□□□□ -1.48
TDP1-214ENST00000556063 STPG3Q8N7X2 389 aa5.79□□□□□ -1.48
TDP1-214ENST00000556063 GNPNAT1Q96EK6 184 aaPredicted RBP5.79□□□□□ -1.48
TDP1-214ENST00000556063 ARPC5LQ9BPX5 153 aa5.79□□□□□ -1.48
TDP1-214ENST00000556063 ARL6Q9H0F7 186 aa5.79□□□□□ -1.48
TDP1-214ENST00000556063 VSIRQ9H7M9 311 aa5.79□□□□□ -1.48
TDP1-214ENST00000556063 DNAJC4Q9NNZ3 241 aa5.79□□□□□ -1.48
TDP1-214ENST00000556063 SLC39A9Q9NUM3 307 aa5.79□□□□□ -1.48
TDP1-214ENST00000556063 DOK5Q9P104 306 aa5.79□□□□□ -1.48
TDP1-214ENST00000556063 TIMM9Q9Y5J7 89 aa5.79□□□□□ -1.48
TDP1-214ENST00000556063 U3KQE9 123 aa5.79□□□□□ -1.48
TDP1-214ENST00000556063 IGHV3OR16-13A0A075B7E8 117 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 IGHV3-74A0A0B4J1X5 117 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 BUB3O43684 328 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 PRR20EP86478 221 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 PRR20CP86479 221 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 PRR20DP86480 221 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 PRR20BP86481 221 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 PRR20AP86496 221 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 GUCA2BQ16661 112 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 CD300EQ496F6 205 aaPredicted RBP5.78□□□□□ -1.48
TDP1-214ENST00000556063 C10orf113Q5VZT2 155 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 ADAMTSL5Q6ZMM2 481 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 TMEM182Q6ZP80 229 aaPredicted RBP5.78□□□□□ -1.48
TDP1-214ENST00000556063 TCF24Q7RTU0 167 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 OR8I2Q8N0Y5 310 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 HSD17B11Q8NBQ5 300 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 OR11H4Q8NGC9 324 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 GATAD1Q8WUU5 269 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 ST8SIA2Q92186 375 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 ZNF414Q96IQ9 312 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 GPR82Q96P67 336 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 RNF2Q99496 336 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 PSMG3Q9BT73 122 aaPredicted RBP5.78□□□□□ -1.48
TDP1-214ENST00000556063 SHANK2-AS3Q9BTD1 123 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 ARV1Q9H2C2 271 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 WFDC1Q9HC57 220 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 MLXQ9UH92 298 aa5.78□□□□□ -1.48
TDP1-214ENST00000556063 ZNF256Q9Y2P7 627 aaPredicted RBP5.78□□□□□ -1.48
TDP1-214ENST00000556063 NOTCH1P46531 2555 aa5.77□□□□□ -1.49
TDP1-214ENST00000556063 IGHV3-66A0A0C4DH42 116 aa5.77□□□□□ -1.49
TDP1-214ENST00000556063 OR4C46A6NHA9 309 aa5.77□□□□□ -1.49
TDP1-214ENST00000556063 ZNF98A6NK75 572 aa5.77□□□□□ -1.49
TDP1-214ENST00000556063 G3V4G9 280 aa5.77□□□□□ -1.49
TDP1-214ENST00000556063 DNASE2O00115 360 aaPredicted RBP5.77□□□□□ -1.49
TDP1-214ENST00000556063 TSPAN4O14817 238 aa5.77□□□□□ -1.49
TDP1-214ENST00000556063 BCL2L11O43521 198 aa5.77□□□□□ -1.49
TDP1-214ENST00000556063 MBP02144 154 aa5.77□□□□□ -1.49
TDP1-214ENST00000556063 RPL7P18124 248 aaKnown RBP5.77□□□□□ -1.49
TDP1-214ENST00000556063 GALR1P47211 349 aa5.77□□□□□ -1.49
TDP1-214ENST00000556063 CMC4P56277 68 aaPredicted RBP5.77□□□□□ -1.49
TDP1-214ENST00000556063 SERF2P84101 59 aa5.77□□□□□ -1.49
TDP1-214ENST00000556063 EGFEM1PQ0D2K5 195 aa5.77□□□□□ -1.49
TDP1-214ENST00000556063 ACOT6Q3I5F7 207 aaPredicted RBP5.77□□□□□ -1.49
TDP1-214ENST00000556063 FFAR4Q5NUL3 377 aa5.77□□□□□ -1.49
TDP1-214ENST00000556063 SAMD13Q5VXD3 122 aa5.77□□□□□ -1.49
TDP1-214ENST00000556063 RPL7L1Q6DKI1 246 aaKnown RBP5.77□□□□□ -1.49
TDP1-214ENST00000556063 C16orf54Q6UWD8 224 aa5.77□□□□□ -1.49
TDP1-214ENST00000556063 TMUB2Q71RG4 321 aa5.77□□□□□ -1.49
TDP1-214ENST00000556063 GTSCR1Q86UQ5 136 aa5.77□□□□□ -1.49
TDP1-214ENST00000556063 TMEM61Q8N0U2 210 aa5.77□□□□□ -1.49
TDP1-214ENST00000556063 SPAG8Q99932 426 aaPredicted RBP5.77□□□□□ -1.49
TDP1-214ENST00000556063 RSG1Q9BU20 258 aa5.77□□□□□ -1.49
TDP1-214ENST00000556063 ZNF471Q9BX82 626 aaPredicted RBP5.77□□□□□ -1.49
TDP1-214ENST00000556063 SLC25A39Q9BZJ4 359 aaPredicted RBP5.77□□□□□ -1.49
TDP1-214ENST00000556063 SLC25A22Q9H936 323 aa5.77□□□□□ -1.49
TDP1-214ENST00000556063 TRAV2A0A0B4J234 112 aa5.76□□□□□ -1.49
TDP1-214ENST00000556063 ZNF785A8K8V0 405 aa5.76□□□□□ -1.49
TDP1-214ENST00000556063 H3BRN7 92 aa5.76□□□□□ -1.49
TDP1-214ENST00000556063 APOHP02749 345 aaPredicted RBP5.76□□□□□ -1.49
TDP1-214ENST00000556063 TPT1P13693 172 aaKnown RBP5.76□□□□□ -1.49
TDP1-214ENST00000556063 GP9P14770 177 aa5.76□□□□□ -1.49
TDP1-214ENST00000556063 CXCL2P19875 107 aa5.76□□□□□ -1.49
TDP1-214ENST00000556063 EDN2P20800 178 aa5.76□□□□□ -1.49
TDP1-214ENST00000556063 ATP6V0CP27449 155 aa5.76□□□□□ -1.49
TDP1-214ENST00000556063 MEOX2P50222 304 aa5.76□□□□□ -1.49
TDP1-214ENST00000556063 RHOBP62745 196 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms