RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 U3KQE9 123 aa7.75□□□□□ -1.17
SYNE2-215ENST00000554997 IGHV7-4-1A0A0J9YVY3 117 aa7.74□□□□□ -1.17
SYNE2-215ENST00000554997 A0A1W2PS18 150 aa7.74□□□□□ -1.17
SYNE2-215ENST00000554997 CHEK1O14757 476 aa7.74□□□□□ -1.17
SYNE2-215ENST00000554997 ZNF207O43670 478 aaKnown RBP7.74□□□□□ -1.17
SYNE2-215ENST00000554997 HNRNPCP07910 306 aaKnown RBP eCLIP7.74□□□□□ -1.17
SYNE2-215ENST00000554997 ATP6V0CP27449 155 aa7.74□□□□□ -1.17
SYNE2-215ENST00000554997 INSL3P51460 131 aa7.74□□□□□ -1.17
SYNE2-215ENST00000554997 LYZP61626 148 aa7.74□□□□□ -1.17
SYNE2-215ENST00000554997 EIF5AP63241 154 aaKnown RBP7.74□□□□□ -1.17
SYNE2-215ENST00000554997 SERF2P84101 59 aa7.74□□□□□ -1.17
SYNE2-215ENST00000554997 PATE2Q6UY27 113 aa7.74□□□□□ -1.17
SYNE2-215ENST00000554997 S100A7AQ86SG5 101 aa7.74□□□□□ -1.17
SYNE2-215ENST00000554997 HSD17B11Q8NBQ5 300 aa7.74□□□□□ -1.17
SYNE2-215ENST00000554997 OR1L4Q8NGR5 311 aa7.74□□□□□ -1.17
SYNE2-215ENST00000554997 OR1B1Q8NGR6 318 aa7.74□□□□□ -1.17
SYNE2-215ENST00000554997 TMEM37Q8WXS4 190 aa7.74□□□□□ -1.17
SYNE2-215ENST00000554997 PSMG3Q9BT73 122 aaPredicted RBP7.74□□□□□ -1.17
SYNE2-215ENST00000554997 PBDC1Q9BVG4 233 aa7.74□□□□□ -1.17
SYNE2-215ENST00000554997 RHPN1-AS1Q9BWJ2 59 aa7.74□□□□□ -1.17
SYNE2-215ENST00000554997 VSIRQ9H7M9 311 aa7.74□□□□□ -1.17
SYNE2-215ENST00000554997 TECRQ9NZ01 308 aaKnown RBP7.74□□□□□ -1.17
SYNE2-215ENST00000554997 SEC14L6B5MCN3 397 aa7.73□□□□□ -1.17
SYNE2-215ENST00000554997 BUB3O43684 328 aa7.73□□□□□ -1.17
SYNE2-215ENST00000554997 SAP30O75446 220 aa7.73□□□□□ -1.17
SYNE2-215ENST00000554997 APOHP02749 345 aaPredicted RBP7.73□□□□□ -1.17
SYNE2-215ENST00000554997 OR5G3P0C626 314 aa7.73□□□□□ -1.17
SYNE2-215ENST00000554997 BMI1P35226 326 aa7.73□□□□□ -1.17
SYNE2-215ENST00000554997 NKX2-5P52952 324 aaPredicted RBP7.73□□□□□ -1.17
SYNE2-215ENST00000554997 DEFB114Q30KQ6 69 aa7.73□□□□□ -1.17
SYNE2-215ENST00000554997 C1orf194Q5T5A4 169 aa7.73□□□□□ -1.17
SYNE2-215ENST00000554997 C9orf66Q5T8R8 295 aa7.73□□□□□ -1.17
SYNE2-215ENST00000554997 C10orf113Q5VZT2 155 aa7.73□□□□□ -1.17
SYNE2-215ENST00000554997 SLC51BQ86UW2 128 aa7.73□□□□□ -1.17
SYNE2-215ENST00000554997 BAP18Q8IXM2 172 aa7.73□□□□□ -1.17
SYNE2-215ENST00000554997 OR2G3Q8NGZ4 309 aa7.73□□□□□ -1.17
SYNE2-215ENST00000554997 GATAD1Q8WUU5 269 aa7.73□□□□□ -1.17
SYNE2-215ENST00000554997 NARS2Q96I59 477 aaKnown RBP7.73□□□□□ -1.17
SYNE2-215ENST00000554997 PFDN5Q99471 154 aa7.73□□□□□ -1.17
SYNE2-215ENST00000554997 ZNF471Q9BX82 626 aaPredicted RBP7.73□□□□□ -1.17
SYNE2-215ENST00000554997 RNF24Q9Y225 148 aa7.73□□□□□ -1.17
SYNE2-215ENST00000554997 HIGD1AQ9Y241 93 aa7.73□□□□□ -1.17
SYNE2-215ENST00000554997 RFNGQ9Y644 331 aa7.73□□□□□ -1.17
SYNE2-215ENST00000554997 WIPF1O43516 503 aa7.72□□□□□ -1.17
SYNE2-215ENST00000554997 COX7A2P2O60397 106 aa7.72□□□□□ -1.17
SYNE2-215ENST00000554997 MBP02144 154 aa7.72□□□□□ -1.17
SYNE2-215ENST00000554997 CD5P06127 495 aa7.72□□□□□ -1.17
SYNE2-215ENST00000554997 SEC11BP0C7V7 166 aa7.72□□□□□ -1.17
SYNE2-215ENST00000554997 SPP1P10451 314 aa7.72□□□□□ -1.17
SYNE2-215ENST00000554997 TPT1P13693 172 aaKnown RBP7.72□□□□□ -1.17
SYNE2-215ENST00000554997 IGLL1P15814 213 aa7.72□□□□□ -1.17
SYNE2-215ENST00000554997 EDN2P20800 178 aa7.72□□□□□ -1.17
SYNE2-215ENST00000554997 FFAR4Q5NUL3 377 aa7.72□□□□□ -1.17
SYNE2-215ENST00000554997 STOML3Q8TAV4 291 aa7.72□□□□□ -1.17
SYNE2-215ENST00000554997 GRAMD2BQ96HH9 432 aa7.72□□□□□ -1.17
SYNE2-215ENST00000554997 SHANK2-AS3Q9BTD1 123 aa7.72□□□□□ -1.17
SYNE2-215ENST00000554997 SLC25A39Q9BZJ4 359 aaPredicted RBP7.72□□□□□ -1.17
SYNE2-215ENST00000554997 GPR61Q9BZJ8 451 aa7.72□□□□□ -1.17
SYNE2-215ENST00000554997 SLC25A32Q9H2D1 315 aa7.72□□□□□ -1.17
SYNE2-215ENST00000554997 TMEM231Q9H6L2 316 aa7.72□□□□□ -1.17
SYNE2-215ENST00000554997 DOK5Q9P104 306 aa7.72□□□□□ -1.17
SYNE2-215ENST00000554997 FBN3Q75N90 2809 aa7.72□□□□□ -1.17
SYNE2-215ENST00000554997 IGHV3-49A0A0A0MS15 119 aa7.71□□□□□ -1.18
SYNE2-215ENST00000554997 ZNF98A6NK75 572 aa7.71□□□□□ -1.18
SYNE2-215ENST00000554997 IGLV1-51P01701 117 aa7.71□□□□□ -1.18
SYNE2-215ENST00000554997 M6PRP20645 277 aa7.71□□□□□ -1.18
SYNE2-215ENST00000554997 ACOT6Q3I5F7 207 aaPredicted RBP7.71□□□□□ -1.18
SYNE2-215ENST00000554997 GCSAMLQ5JQS6 135 aa7.71□□□□□ -1.18
SYNE2-215ENST00000554997 FAM90A2PQ658T7 463 aa7.71□□□□□ -1.18
SYNE2-215ENST00000554997 C16orf54Q6UWD8 224 aa7.71□□□□□ -1.18
SYNE2-215ENST00000554997 LINC00305Q7Z4B0 112 aa7.71□□□□□ -1.18
SYNE2-215ENST00000554997 OR2K2Q8NGT1 345 aa7.71□□□□□ -1.18
SYNE2-215ENST00000554997 ST8SIA2Q92186 375 aa7.71□□□□□ -1.18
SYNE2-215ENST00000554997 RNF2Q99496 336 aa7.71□□□□□ -1.18
SYNE2-215ENST00000554997 SH3BGRL3Q9H299 93 aa7.71□□□□□ -1.18
SYNE2-215ENST00000554997 SEPSECSQ9HD40 501 aaKnown RBP7.71□□□□□ -1.18
SYNE2-215ENST00000554997 MLXQ9UH92 298 aa7.71□□□□□ -1.18
SYNE2-215ENST00000554997 IGHV3OR16-13A0A075B7E8 117 aa7.7□□□□□ -1.18
SYNE2-215ENST00000554997 IGHV3-74A0A0B4J1X5 117 aa7.7□□□□□ -1.18
SYNE2-215ENST00000554997 TRAV25A0A0B4J276 109 aa7.7□□□□□ -1.18
SYNE2-215ENST00000554997 IGHV3-66A0A0C4DH42 116 aa7.7□□□□□ -1.18
SYNE2-215ENST00000554997 H3BRN7 92 aa7.7□□□□□ -1.18
SYNE2-215ENST00000554997 BOLA2-SMG1P6H3BVE0 249 aa7.7□□□□□ -1.18
SYNE2-215ENST00000554997 CD300EQ496F6 205 aaPredicted RBP7.7□□□□□ -1.18
SYNE2-215ENST00000554997 FAM78BQ5VT40 261 aa7.7□□□□□ -1.18
SYNE2-215ENST00000554997 EIF5AL1Q6IS14 154 aaKnown RBP7.7□□□□□ -1.18
SYNE2-215ENST00000554997 OR8I2Q8N0Y5 310 aa7.7□□□□□ -1.18
SYNE2-215ENST00000554997 OR10G4Q8NGN3 311 aa7.7□□□□□ -1.18
SYNE2-215ENST00000554997 OR10G9Q8NGN4 311 aa7.7□□□□□ -1.18
SYNE2-215ENST00000554997 OR10G7Q8NGN6 311 aa7.7□□□□□ -1.18
SYNE2-215ENST00000554997 DYNLRB2Q8TF09 96 aa7.7□□□□□ -1.18
SYNE2-215ENST00000554997 GPR82Q96P67 336 aa7.7□□□□□ -1.18
SYNE2-215ENST00000554997 UHRF2Q96PU4 802 aa7.7□□□□□ -1.18
SYNE2-215ENST00000554997 WNK1Q9H4A3 2382 aa7.69□□□□□ -1.18
SYNE2-215ENST00000554997 VWFP04275 2813 aa7.69□□□□□ -1.18
SYNE2-215ENST00000554997 HELTA6NFD8 242 aa7.69□□□□□ -1.18
SYNE2-215ENST00000554997 RHOBP62745 196 aa7.69□□□□□ -1.18
SYNE2-215ENST00000554997 TMEM41BQ5BJD5 291 aa7.69□□□□□ -1.18
SYNE2-215ENST00000554997 OXLD1Q5BKU9 147 aa7.69□□□□□ -1.18
SYNE2-215ENST00000554997 RBPMS2Q6ZRY4 209 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms