RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 LIMS3P0CW19 117 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 LIMS4P0CW20 117 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 PRTN3P24158 256 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 NPY1RP25929 384 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 HTR1DP28221 377 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 OR10J1P30954 320 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 DLX6P56179 175 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 TCL1AP56279 114 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 TAS2R19P59542 299 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 KRTAP12-2P59991 146 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 PCBD1P61457 104 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 HIST1H3AP68431 136 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 PSG4Q00888 419 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 HIST1H1AQ02539 215 aaPredicted RBP3.43□□□□□ -1.86
FOXN3-206ENST00000554005 DHRS2Q13268 280 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 ENDOGQ14249 297 aaKnown RBP3.43□□□□□ -1.86
FOXN3-206ENST00000554005 EDDM3AQ14507 147 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 TBC1D28Q2M2D7 210 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 SLC25A35Q3KQZ1 300 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 FBXL19-AS1Q494R0 122 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 ACTL10Q5JWF8 245 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 ZNF684Q5T5D7 378 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 HIST2H3AQ71DI3 136 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 SSX8Q7RTT4 187 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 TMEM183AQ8IXX5 376 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 OSR2Q8N2R0 312 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 PNKDQ8N490 385 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 SLC22A24Q8N4F4 322 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 OR5B3Q8NH48 314 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 OR4X1Q8NH49 305 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 ZNRF2Q8NHG8 242 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 TMEM106AQ96A25 262 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 ACOT13Q9NPJ3 140 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 POLR1DQ9Y2S0 133 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 LHFPL6Q9Y693 200 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 ZNF462Q96JM2 2506 aa3.43□□□□□ -1.86
FOXN3-206ENST00000554005 ALPK2Q86TB3 2170 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 SHANK1Q9Y566 2161 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 SVILO95425 2214 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 TRBV9A0A0B4J1U6 114 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 A0A1W2PRF3 423 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 A0A1W2PRM7 423 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 C7orf77A4D0Y5 90 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 FABP5P3A8MUU1 101 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 EEF1E1-BLOC1S5C9J1V9 151 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 F5H5K5 113 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 KRTAP4-16G5E9R7 235 aaPredicted RBP3.42□□□□□ -1.86
FOXN3-206ENST00000554005 J3QKU1 62 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 CCL21O00585 134 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 EEF1E1O43324 174 aaKnown RBP3.42□□□□□ -1.86
FOXN3-206ENST00000554005 UBL3O95164 117 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 PTHP01270 115 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 MMP7P09237 267 aaPredicted RBP3.42□□□□□ -1.86
FOXN3-206ENST00000554005 IGLC1P0CG04 106 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 MGMTP16455 207 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 CXCL3P19876 107 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 USF1P22415 310 aaPredicted RBP3.42□□□□□ -1.86
FOXN3-206ENST00000554005 SRIP30626 198 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 GLRXP35754 106 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 GNG4P50150 75 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 SULT1A1P50225 295 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 SULT1A2P50226 295 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 DLX1P56177 255 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 UBE2MP61081 183 aaKnown RBP3.42□□□□□ -1.86
FOXN3-206ENST00000554005 TMEM267Q0VDI3 215 aaPredicted RBP3.42□□□□□ -1.86
FOXN3-206ENST00000554005 PRDX4Q13162 271 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 ZNF266Q14584 549 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 BATFQ16520 125 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 RPEL1Q2QD12 228 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 GLT8D1Q68CQ7 371 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 ZFAND6Q6FIF0 208 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 OR10K2Q6IF99 312 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 ZNF322Q6U7Q0 402 aaPredicted RBP3.42□□□□□ -1.86
FOXN3-206ENST00000554005 UNQ5815/PRO19632Q6UWF5 114 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 TEX43Q6ZNM6 134 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 SLC25A26Q70HW3 274 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 ZNF433Q8N7K0 673 aaPredicted RBP3.42□□□□□ -1.86
FOXN3-206ENST00000554005 ZFP41Q8N8Y5 198 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 ZNF439Q8NDP4 499 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 OR2T35Q8NGX2 323 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 OR9G1Q8NH87 305 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 THEM6Q8WUY1 208 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 BLNKQ8WV28 456 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 RDH5Q92781 318 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 AMELYQ99218 206 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 TMEM133Q9H2Q1 129 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 OR51I2Q9H344 312 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 MAP1LC3AQ9H492 121 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 ENY2Q9NPA8 101 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 BET1LQ9NYM9 111 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 CACFD1Q9UGQ2 172 aa3.42□□□□□ -1.86
FOXN3-206ENST00000554005 LSM2Q9Y333 95 aaKnown RBP3.42□□□□□ -1.86
FOXN3-206ENST00000554005 MRPS16Q9Y3D3 137 aaKnown RBP3.42□□□□□ -1.86
FOXN3-206ENST00000554005 RP1L1Q8IWN7 2480 aaPredicted RBP3.42□□□□□ -1.86
FOXN3-206ENST00000554005 BORCS7-ASMTA0A0B4J1R7 106 aa3.41□□□□□ -1.86
FOXN3-206ENST00000554005 A0A0G2JLM5 398 aa3.41□□□□□ -1.86
FOXN3-206ENST00000554005 IGHV1-69-2A0A0G2JMI3 117 aa3.41□□□□□ -1.86
FOXN3-206ENST00000554005 A0A1B0GX51 115 aa3.41□□□□□ -1.86
FOXN3-206ENST00000554005 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.41□□□□□ -1.86
FOXN3-206ENST00000554005 J3QLW9 94 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms