RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 CASC10Q5T4H9 136 aa11.32□□□□□ -0.6
SHMT2-204ENST00000553324 RNF183Q96D59 192 aa11.32□□□□□ -0.6
SHMT2-204ENST00000553324 MGAT4CQ9UBM8 478 aa11.32□□□□□ -0.6
SHMT2-204ENST00000553324 RCL1Q9Y2P8 373 aaKnown RBP11.32□□□□□ -0.6
SHMT2-204ENST00000553324 ZNF688P0C7X2 276 aa11.31□□□□□ -0.6
SHMT2-204ENST00000553324 ZNF124Q15973 351 aa11.31□□□□□ -0.6
SHMT2-204ENST00000553324 SAMD13Q5VXD3 122 aa11.31□□□□□ -0.6
SHMT2-204ENST00000553324 LEMD1Q68G75 181 aa11.31□□□□□ -0.6
SHMT2-204ENST00000553324 OR8I2Q8N0Y5 310 aa11.31□□□□□ -0.6
SHMT2-204ENST00000553324 FAM24BQ8N5W8 94 aa11.31□□□□□ -0.6
SHMT2-204ENST00000553324 K7EPK0 472 aa11.3□□□□□ -0.6
SHMT2-204ENST00000553324 DEDDO75618 318 aa11.3□□□□□ -0.6
SHMT2-204ENST00000553324 ORM2P19652 201 aa11.3□□□□□ -0.6
SHMT2-204ENST00000553324 ID1P41134 155 aa11.3□□□□□ -0.6
SHMT2-204ENST00000553324 BCAP31P51572 246 aa11.3□□□□□ -0.6
SHMT2-204ENST00000553324 IFITM3Q01628 133 aa11.3□□□□□ -0.6
SHMT2-204ENST00000553324 TMEM41BQ5BJD5 291 aa11.3□□□□□ -0.6
SHMT2-204ENST00000553324 TEPPQ6URK8 271 aa11.3□□□□□ -0.6
SHMT2-204ENST00000553324 CYP2G1PQ6ZSU1 146 aa11.3□□□□□ -0.6
SHMT2-204ENST00000553324 NRARPQ7Z6K4 114 aa11.3□□□□□ -0.6
SHMT2-204ENST00000553324 GATAD1Q8WUU5 269 aa11.3□□□□□ -0.6
SHMT2-204ENST00000553324 TMEM147Q9BVK8 224 aa11.3□□□□□ -0.6
SHMT2-204ENST00000553324 RNF24Q9Y225 148 aa11.3□□□□□ -0.6
SHMT2-204ENST00000553324 LSM5Q9Y4Y9 91 aaKnown RBP11.3□□□□□ -0.6
SHMT2-204ENST00000553324 INMT-MINDY4F8WBC2 141 aa11.29□□□□□ -0.6
SHMT2-204ENST00000553324 RRAS2P62070 204 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-204ENST00000553324 DEFB135Q30KP9 77 aa11.29□□□□□ -0.6
SHMT2-204ENST00000553324 MORN3Q6PF18 240 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-204ENST00000553324 GPR82Q96P67 336 aa11.29□□□□□ -0.6
SHMT2-204ENST00000553324 MARVELD1Q9BSK0 173 aa11.29□□□□□ -0.6
SHMT2-204ENST00000553324 SPP1P10451 314 aa11.28□□□□□ -0.6
SHMT2-204ENST00000553324 GALR1P47211 349 aa11.28□□□□□ -0.6
SHMT2-204ENST00000553324 MEOX2P50222 304 aa11.28□□□□□ -0.6
SHMT2-204ENST00000553324 CAV2P51636 162 aa11.28□□□□□ -0.6
SHMT2-204ENST00000553324 RAP2BP61225 183 aa11.28□□□□□ -0.6
SHMT2-204ENST00000553324 CYCSP99999 105 aaKnown RBP11.28□□□□□ -0.6
SHMT2-204ENST00000553324 PSMG4Q5JS54 123 aa11.28□□□□□ -0.6
SHMT2-204ENST00000553324 TMEM217Q8N7C4 229 aa11.28□□□□□ -0.6
SHMT2-204ENST00000553324 OR1B1Q8NGR6 318 aa11.28□□□□□ -0.6
SHMT2-204ENST00000553324 ZNF98A6NK75 572 aa11.27□□□□□ -0.61
SHMT2-204ENST00000553324 HYPMO75409 117 aa11.27□□□□□ -0.61
SHMT2-204ENST00000553324 CA1P00915 261 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-204ENST00000553324 RLN2P04090 185 aa11.27□□□□□ -0.61
SHMT2-204ENST00000553324 GATA2P23769 480 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-204ENST00000553324 PLP1P60201 277 aa11.27□□□□□ -0.61
SHMT2-204ENST00000553324 NUTF2P61970 127 aaKnown RBP11.27□□□□□ -0.61
SHMT2-204ENST00000553324 IL15RAQ13261 267 aa11.27□□□□□ -0.61
SHMT2-204ENST00000553324 RAB31Q13636 194 aa11.27□□□□□ -0.61
SHMT2-204ENST00000553324 PXDC1Q5TGL8 231 aa11.27□□□□□ -0.61
SHMT2-204ENST00000553324 TMEM182Q6ZP80 229 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-204ENST00000553324 GOSR2O14653 212 aa11.26□□□□□ -0.61
SHMT2-204ENST00000553324 CCNKO75909 580 aa11.26□□□□□ -0.61
SHMT2-204ENST00000553324 ATF4P18848 351 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-204ENST00000553324 S100A11P31949 105 aa11.26□□□□□ -0.61
SHMT2-204ENST00000553324 S100A10P60903 97 aa11.26□□□□□ -0.61
SHMT2-204ENST00000553324 ACTL10Q5JWF8 245 aa11.26□□□□□ -0.61
SHMT2-204ENST00000553324 TRPT1Q86TN4 253 aaKnown RBP11.26□□□□□ -0.61
SHMT2-204ENST00000553324 ZNF546Q86UE3 836 aa11.26□□□□□ -0.61
SHMT2-204ENST00000553324 RARRES2Q99969 163 aa11.26□□□□□ -0.61
SHMT2-204ENST00000553324 LYRM2Q9NU23 88 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-204ENST00000553324 HIGD1AQ9Y241 93 aa11.26□□□□□ -0.61
SHMT2-204ENST00000553324 KMT2CQ8NEZ4 4911 aaKnown RBP11.26□□□□□ -0.61
SHMT2-204ENST00000553324 ISLRO14498 428 aa11.25□□□□□ -0.61
SHMT2-204ENST00000553324 LINC00869P0C866 280 aa11.25□□□□□ -0.61
SHMT2-204ENST00000553324 PSMB3P49720 205 aa11.25□□□□□ -0.61
SHMT2-204ENST00000553324 HBG1P69891 147 aa11.25□□□□□ -0.61
SHMT2-204ENST00000553324 HBG2P69892 147 aa11.25□□□□□ -0.61
SHMT2-204ENST00000553324 ARL16Q0P5N6 197 aa11.25□□□□□ -0.61
SHMT2-204ENST00000553324 RAB32Q13637 225 aa11.25□□□□□ -0.61
SHMT2-204ENST00000553324 SPATA31B1PQ5VZV4 182 aa11.25□□□□□ -0.61
SHMT2-204ENST00000553324 STX12Q86Y82 276 aa11.25□□□□□ -0.61
SHMT2-204ENST00000553324 SLC25A39Q9BZJ4 359 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-204ENST00000553324 NMES1Q9C002 83 aa11.25□□□□□ -0.61
SHMT2-204ENST00000553324 C11orf1Q9H5F2 150 aa11.25□□□□□ -0.61
SHMT2-204ENST00000553324 SLC25A22Q9H936 323 aa11.25□□□□□ -0.61
SHMT2-204ENST00000553324 FAM24AA6NFZ4 105 aa11.24□□□□□ -0.61
SHMT2-204ENST00000553324 KNCNA6PVL3 124 aa11.24□□□□□ -0.61
SHMT2-204ENST00000553324 OR5G3P0C626 314 aa11.24□□□□□ -0.61
SHMT2-204ENST00000553324 RPL7P18124 248 aaKnown RBP11.24□□□□□ -0.61
SHMT2-204ENST00000553324 SULT1A1P50225 295 aa11.24□□□□□ -0.61
SHMT2-204ENST00000553324 SLC38A11Q08AI6 406 aa11.24□□□□□ -0.61
SHMT2-204ENST00000553324 ATP6V1FQ16864 119 aa11.24□□□□□ -0.61
SHMT2-204ENST00000553324 ZFAND6Q6FIF0 208 aa11.24□□□□□ -0.61
SHMT2-204ENST00000553324 LINC00052Q96N35 136 aa11.24□□□□□ -0.61
SHMT2-204ENST00000553324 RSG1Q9BU20 258 aa11.24□□□□□ -0.61
SHMT2-204ENST00000553324 ARL6Q9H0F7 186 aa11.24□□□□□ -0.61
SHMT2-204ENST00000553324 ELOA3CA0A087WX78 387 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-204ENST00000553324 A0A0J9YWU9 116 aa11.23□□□□□ -0.61
SHMT2-204ENST00000553324 AGPAT2O15120 278 aa11.23□□□□□ -0.61
SHMT2-204ENST00000553324 CST7O76096 145 aa11.23□□□□□ -0.61
SHMT2-204ENST00000553324 Q6ZRG5 221 aa11.23□□□□□ -0.61
SHMT2-204ENST00000553324 TMEM252Q8N6L7 170 aa11.23□□□□□ -0.61
SHMT2-204ENST00000553324 OR11H2Q8NH07 326 aa11.23□□□□□ -0.61
SHMT2-204ENST00000553324 C16orf92Q96LL3 132 aa11.23□□□□□ -0.61
SHMT2-204ENST00000553324 SHANK2-AS3Q9BTD1 123 aa11.23□□□□□ -0.61
SHMT2-204ENST00000553324 C1QTNF4Q9BXJ3 329 aa11.23□□□□□ -0.61
SHMT2-204ENST00000553324 SLC25A32Q9H2D1 315 aa11.23□□□□□ -0.61
SHMT2-204ENST00000553324 UQCC1Q9NVA1 299 aa11.23□□□□□ -0.61
SHMT2-204ENST00000553324 E5RGE8 158 aa11.22□□□□□ -0.61
SHMT2-204ENST00000553324 H3BMM0 161 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms