RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 ATP5G3P48201 142 aa7.27□□□□□ -1.25
VPS29-208ENST00000550267 GABARAPL2P60520 117 aa7.27□□□□□ -1.25
VPS29-208ENST00000550267 SPCS3P61009 180 aa7.27□□□□□ -1.25
VPS29-208ENST00000550267 RND3P61587 244 aa7.27□□□□□ -1.25
VPS29-208ENST00000550267 TRIM16LQ309B1 348 aa7.27□□□□□ -1.25
VPS29-208ENST00000550267 C2orf83Q53S99 150 aa7.27□□□□□ -1.25
VPS29-208ENST00000550267 UBE2NLQ5JXB2 153 aa7.27□□□□□ -1.25
VPS29-208ENST00000550267 AMTNQ6UX39 209 aa7.27□□□□□ -1.25
VPS29-208ENST00000550267 RNASEH2CQ8TDP1 164 aaKnown RBP7.27□□□□□ -1.25
VPS29-208ENST00000550267 TMEM170AQ8WVE7 144 aa7.27□□□□□ -1.25
VPS29-208ENST00000550267 FRZBQ92765 325 aa7.27□□□□□ -1.25
VPS29-208ENST00000550267 RNF125Q96EQ8 232 aa7.27□□□□□ -1.25
VPS29-208ENST00000550267 UHRF2Q96PU4 802 aa7.27□□□□□ -1.25
VPS29-208ENST00000550267 PBDC1Q9BVG4 233 aa7.27□□□□□ -1.25
VPS29-208ENST00000550267 Q9H3A6 140 aa7.27□□□□□ -1.25
VPS29-208ENST00000550267 HEYLQ9NQ87 328 aaPredicted RBP7.27□□□□□ -1.25
VPS29-208ENST00000550267 C3orf85A0A1B0GTC6 90 aa7.26□□□□□ -1.25
VPS29-208ENST00000550267 PLAC8L1A1L4L8 177 aa7.26□□□□□ -1.25
VPS29-208ENST00000550267 ELK1P19419 428 aa7.26□□□□□ -1.25
VPS29-208ENST00000550267 AZU1P20160 251 aa7.26□□□□□ -1.25
VPS29-208ENST00000550267 PIGPP57054 158 aa7.26□□□□□ -1.25
VPS29-208ENST00000550267 SP6Q3SY56 376 aa7.26□□□□□ -1.25
VPS29-208ENST00000550267 SAMD12Q8N8I0 201 aa7.26□□□□□ -1.25
VPS29-208ENST00000550267 SLC24A4Q8NFF2 622 aa7.26□□□□□ -1.25
VPS29-208ENST00000550267 OR4C16Q8NGL9 310 aa7.26□□□□□ -1.25
VPS29-208ENST00000550267 RNASE11Q8TAA1 199 aaKnown RBP7.26□□□□□ -1.25
VPS29-208ENST00000550267 GPX8Q8TED1 209 aa7.26□□□□□ -1.25
VPS29-208ENST00000550267 RRNAD1Q96FB5 475 aaKnown RBP7.26□□□□□ -1.25
VPS29-208ENST00000550267 C18orf15Q96N68 181 aa7.26□□□□□ -1.25
VPS29-208ENST00000550267 ABHD1Q96SE0 405 aa7.26□□□□□ -1.25
VPS29-208ENST00000550267 RPRMQ9NS64 109 aa7.26□□□□□ -1.25
VPS29-208ENST00000550267 ZNF586Q9NXT0 402 aa7.26□□□□□ -1.25
VPS29-208ENST00000550267 DOK5Q9P104 306 aa7.26□□□□□ -1.25
VPS29-208ENST00000550267 VPS13BQ7Z7G8 4022 aa7.26□□□□□ -1.25
VPS29-208ENST00000550267 CBY3A6NI87 242 aa7.25□□□□□ -1.25
VPS29-208ENST00000550267 A8MTW9 85 aa7.25□□□□□ -1.25
VPS29-208ENST00000550267 M0R2Z0 102 aa7.25□□□□□ -1.25
VPS29-208ENST00000550267 ISLRO14498 428 aa7.25□□□□□ -1.25
VPS29-208ENST00000550267 CRXO43186 299 aaPredicted RBP7.25□□□□□ -1.25
VPS29-208ENST00000550267 RCVRNP35243 200 aa7.25□□□□□ -1.25
VPS29-208ENST00000550267 NUP62P37198 522 aaPredicted RBP7.25□□□□□ -1.25
VPS29-208ENST00000550267 SPINK13Q1W4C9 94 aa7.25□□□□□ -1.25
VPS29-208ENST00000550267 OR8G2PQ6IF36 304 aa7.25□□□□□ -1.25
VPS29-208ENST00000550267 FCGR1BQ92637 280 aa7.25□□□□□ -1.25
VPS29-208ENST00000550267 ZNF486Q96H40 463 aaPredicted RBP7.25□□□□□ -1.25
VPS29-208ENST00000550267 MDFICQ9P1T7 246 aa7.25□□□□□ -1.25
VPS29-208ENST00000550267 A0A1W2PPQ1 181 aa7.24□□□□□ -1.25
VPS29-208ENST00000550267 CEBPZOSA8MTT3 80 aa7.24□□□□□ -1.25
VPS29-208ENST00000550267 ANKRD65E5RJM6 399 aa7.24□□□□□ -1.25
VPS29-208ENST00000550267 TMEM127O75204 238 aa7.24□□□□□ -1.25
VPS29-208ENST00000550267 INSP01308 110 aa7.24□□□□□ -1.25
VPS29-208ENST00000550267 UCP1P25874 307 aa7.24□□□□□ -1.25
VPS29-208ENST00000550267 TSPOP30536 169 aa7.24□□□□□ -1.25
VPS29-208ENST00000550267 TGFBR1P36897 503 aa7.24□□□□□ -1.25
VPS29-208ENST00000550267 SUPT4H1P63272 117 aaKnown RBP7.24□□□□□ -1.25
VPS29-208ENST00000550267 ZNF90Q03938 601 aa7.24□□□□□ -1.25
VPS29-208ENST00000550267 AARDQ4LEZ3 155 aa7.24□□□□□ -1.25
VPS29-208ENST00000550267 ETFRF1Q6IPR1 90 aa7.24□□□□□ -1.25
VPS29-208ENST00000550267 IZUMO2Q6UXV1 221 aa7.24□□□□□ -1.25
VPS29-208ENST00000550267 BAP18Q8IXM2 172 aa7.24□□□□□ -1.25
VPS29-208ENST00000550267 OR52E5Q8NH55 327 aa7.24□□□□□ -1.25
VPS29-208ENST00000550267 C16orf92Q96LL3 132 aa7.24□□□□□ -1.25
VPS29-208ENST00000550267 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.24□□□□□ -1.25
VPS29-208ENST00000550267 PFDN2Q9UHV9 154 aa7.24□□□□□ -1.25
VPS29-208ENST00000550267 SMR3BP02814 79 aaPredicted RBP7.23□□□□□ -1.25
VPS29-208ENST00000550267 CNN1P51911 297 aaKnown RBP7.23□□□□□ -1.25
VPS29-208ENST00000550267 LINC00315P59091 139 aa7.23□□□□□ -1.25
VPS29-208ENST00000550267 LYZP61626 148 aa7.23□□□□□ -1.25
VPS29-208ENST00000550267 ESRGQ1W209 222 aa7.23□□□□□ -1.25
VPS29-208ENST00000550267 C1orf194Q5T5A4 169 aa7.23□□□□□ -1.25
VPS29-208ENST00000550267 Q6ZRN7 208 aaPredicted RBP7.23□□□□□ -1.25
VPS29-208ENST00000550267 LHFPL1Q86WI0 220 aa7.23□□□□□ -1.25
VPS29-208ENST00000550267 SNX29P2Q8IUI4 249 aa7.23□□□□□ -1.25
VPS29-208ENST00000550267 OR11H7Q8NGC8 314 aa7.23□□□□□ -1.25
VPS29-208ENST00000550267 UPK3BQ9BT76 320 aa7.23□□□□□ -1.25
VPS29-208ENST00000550267 PTTG2Q9NZH5 202 aa7.23□□□□□ -1.25
VPS29-208ENST00000550267 COPZ2Q9P299 210 aa7.23□□□□□ -1.25
VPS29-208ENST00000550267 CACNG5Q9UF02 275 aa7.23□□□□□ -1.25
VPS29-208ENST00000550267 IGKV1D-37A0A075B6S9 117 aa7.22□□□□□ -1.25
VPS29-208ENST00000550267 TRAV12-2A0A075B6T6 113 aa7.22□□□□□ -1.25
VPS29-208ENST00000550267 TRAV26-1A0A087WT03 109 aa7.22□□□□□ -1.25
VPS29-208ENST00000550267 A0A0J9YY99 117 aa7.22□□□□□ -1.25
VPS29-208ENST00000550267 ZFP92A6NM28 416 aa7.22□□□□□ -1.25
VPS29-208ENST00000550267 KRTAP10-1P60331 282 aa7.22□□□□□ -1.25
VPS29-208ENST00000550267 B2MP61769 119 aa7.22□□□□□ -1.25
VPS29-208ENST00000550267 OR5I1Q13606 314 aa7.22□□□□□ -1.25
VPS29-208ENST00000550267 KLF9Q13886 244 aaPredicted RBP7.22□□□□□ -1.25
VPS29-208ENST00000550267 NMSQ5H8A3 153 aa7.22□□□□□ -1.25
VPS29-208ENST00000550267 FAM219AQ8IW50 185 aa7.22□□□□□ -1.25
VPS29-208ENST00000550267 OR8I2Q8N0Y5 310 aa7.22□□□□□ -1.25
VPS29-208ENST00000550267 LHFPL5Q8TAF8 219 aa7.22□□□□□ -1.25
VPS29-208ENST00000550267 PPP1R14BQ96C90 147 aa7.22□□□□□ -1.25
VPS29-208ENST00000550267 GNPNAT1Q96EK6 184 aaPredicted RBP7.22□□□□□ -1.25
VPS29-208ENST00000550267 C17orf77Q96MU5 243 aa7.22□□□□□ -1.25
VPS29-208ENST00000550267 MRPS16Q9Y3D3 137 aaKnown RBP7.22□□□□□ -1.25
VPS29-208ENST00000550267 DUSP14O95147 198 aaKnown RBP7.21□□□□□ -1.26
VPS29-208ENST00000550267 RPS19P39019 145 aaKnown RBP7.21□□□□□ -1.26
VPS29-208ENST00000550267 MEOX2P50222 304 aa7.21□□□□□ -1.26
VPS29-208ENST00000550267 OR2F1Q13607 317 aa7.21□□□□□ -1.26
VPS29-208ENST00000550267 MEF2DQ14814 521 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms