RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 MIC13Q5XKP0 118 aa17.49■□□□□ 0.39
SMARCD1-203ENST00000547247 LAMTOR1Q6IAA8 161 aa17.49■□□□□ 0.39
SMARCD1-203ENST00000547247 STPG3Q8N7X2 389 aa17.49■□□□□ 0.39
SMARCD1-203ENST00000547247 ZNF709Q8N972 641 aa17.49■□□□□ 0.39
SMARCD1-203ENST00000547247 RNF2Q99496 336 aa17.49■□□□□ 0.39
SMARCD1-203ENST00000547247 ARL6Q9H0F7 186 aa17.49■□□□□ 0.39
SMARCD1-203ENST00000547247 DOK5Q9P104 306 aa17.49■□□□□ 0.39
SMARCD1-203ENST00000547247 KRTAP10-11P60412 298 aa17.48■□□□□ 0.39
SMARCD1-203ENST00000547247 PRR20EP86478 221 aa17.48■□□□□ 0.39
SMARCD1-203ENST00000547247 PRR20CP86479 221 aa17.48■□□□□ 0.39
SMARCD1-203ENST00000547247 PRR20DP86480 221 aa17.48■□□□□ 0.39
SMARCD1-203ENST00000547247 PRR20BP86481 221 aa17.48■□□□□ 0.39
SMARCD1-203ENST00000547247 PRR20AP86496 221 aa17.48■□□□□ 0.39
SMARCD1-203ENST00000547247 PXDC1Q5TGL8 231 aa17.48■□□□□ 0.39
SMARCD1-203ENST00000547247 Q6ZRG5 221 aa17.48■□□□□ 0.39
SMARCD1-203ENST00000547247 RBPMS2Q6ZRY4 209 aaKnown RBP17.48■□□□□ 0.39
SMARCD1-203ENST00000547247 TMEM61Q8N0U2 210 aa17.48■□□□□ 0.39
SMARCD1-203ENST00000547247 PPP1R14BQ96C90 147 aa17.48■□□□□ 0.39
SMARCD1-203ENST00000547247 PARD6GQ9BYG4 376 aaPredicted RBP17.48■□□□□ 0.39
SMARCD1-203ENST00000547247 TRAV25A0A0B4J276 109 aa17.47■□□□□ 0.39
SMARCD1-203ENST00000547247 IZUMO1RA6ND01 250 aa17.47■□□□□ 0.39
SMARCD1-203ENST00000547247 BUB3O43684 328 aa17.47■□□□□ 0.39
SMARCD1-203ENST00000547247 HYPMO75409 117 aa17.47■□□□□ 0.39
SMARCD1-203ENST00000547247 CD5P06127 495 aa17.47■□□□□ 0.39
SMARCD1-203ENST00000547247 OR5G3P0C626 314 aa17.47■□□□□ 0.39
SMARCD1-203ENST00000547247 S100A7P31151 101 aa17.47■□□□□ 0.39
SMARCD1-203ENST00000547247 NEURL2Q9BR09 285 aa17.47■□□□□ 0.39
SMARCD1-203ENST00000547247 PXMP4Q9Y6I8 212 aa17.47■□□□□ 0.39
SMARCD1-203ENST00000547247 C17orf112F2Z3M2 114 aa17.46■□□□□ 0.39
SMARCD1-203ENST00000547247 B2MP61769 119 aa17.46■□□□□ 0.39
SMARCD1-203ENST00000547247 ZNF345Q14585 488 aa17.46■□□□□ 0.39
SMARCD1-203ENST00000547247 KCNIP2Q9NS61 270 aa17.46■□□□□ 0.39
SMARCD1-203ENST00000547247 SLC39A9Q9NUM3 307 aa17.46■□□□□ 0.39
SMARCD1-203ENST00000547247 HIGD1AQ9Y241 93 aa17.46■□□□□ 0.39
SMARCD1-203ENST00000547247 ZNF256Q9Y2P7 627 aaPredicted RBP17.46■□□□□ 0.39
SMARCD1-203ENST00000547247 C16orf54Q6UWD8 224 aa17.45■□□□□ 0.38
SMARCD1-203ENST00000547247 TCF24Q7RTU0 167 aa17.45■□□□□ 0.38
SMARCD1-203ENST00000547247 S100A7AQ86SG5 101 aa17.45■□□□□ 0.38
SMARCD1-203ENST00000547247 SORL1Q92673 2214 aa17.45■□□□□ 0.38
SMARCD1-203ENST00000547247 C1QBP02746 253 aa17.45■□□□□ 0.38
SMARCD1-203ENST00000547247 FAM90A2PQ658T7 463 aa17.45■□□□□ 0.38
SMARCD1-203ENST00000547247 ARV1Q9H2C2 271 aa17.45■□□□□ 0.38
SMARCD1-203ENST00000547247 MEGF8Q7Z7M0 2845 aa17.44■□□□□ 0.38
SMARCD1-203ENST00000547247 ELOA3CA0A087WX78 387 aaPredicted RBP17.44■□□□□ 0.38
SMARCD1-203ENST00000547247 TAAR5O14804 337 aa17.44■□□□□ 0.38
SMARCD1-203ENST00000547247 TSPAN4O14817 238 aa17.44■□□□□ 0.38
SMARCD1-203ENST00000547247 COX7A2P2O60397 106 aa17.44■□□□□ 0.38
SMARCD1-203ENST00000547247 GP9P14770 177 aa17.44■□□□□ 0.38
SMARCD1-203ENST00000547247 DEFA6Q01524 100 aa17.44■□□□□ 0.38
SMARCD1-203ENST00000547247 GUCA2BQ16661 112 aa17.44■□□□□ 0.38
SMARCD1-203ENST00000547247 PATE2Q6UY27 113 aa17.44■□□□□ 0.38
SMARCD1-203ENST00000547247 KCNRGQ8N5I3 272 aa17.44■□□□□ 0.38
SMARCD1-203ENST00000547247 RSG1Q9BU20 258 aa17.44■□□□□ 0.38
SMARCD1-203ENST00000547247 A0A0D9SG52 128 aa17.43■□□□□ 0.38
SMARCD1-203ENST00000547247 ZNF785A8K8V0 405 aa17.43■□□□□ 0.38
SMARCD1-203ENST00000547247 C1orf194Q5T5A4 169 aa17.43■□□□□ 0.38
SMARCD1-203ENST00000547247 OR1L4Q8NGR5 311 aa17.43■□□□□ 0.38
SMARCD1-203ENST00000547247 GLMPQ8WWB7 406 aa17.43■□□□□ 0.38
SMARCD1-203ENST00000547247 SLC25A39Q9BZJ4 359 aaPredicted RBP17.43■□□□□ 0.38
SMARCD1-203ENST00000547247 BORCS7-ASMTA0A0B4J1R7 106 aa17.42■□□□□ 0.38
SMARCD1-203ENST00000547247 ZNF98A6NK75 572 aa17.42■□□□□ 0.38
SMARCD1-203ENST00000547247 RPL11P62913 178 aaKnown RBP17.42■□□□□ 0.38
SMARCD1-203ENST00000547247 CD300CQ08708 224 aa17.42■□□□□ 0.38
SMARCD1-203ENST00000547247 TMEM37Q8WXS4 190 aa17.42■□□□□ 0.38
SMARCD1-203ENST00000547247 HYLS1Q96M11 299 aa17.42■□□□□ 0.38
SMARCD1-203ENST00000547247 UHRF2Q96PU4 802 aa17.42■□□□□ 0.38
SMARCD1-203ENST00000547247 PFDN5Q99471 154 aa17.42■□□□□ 0.38
SMARCD1-203ENST00000547247 SPAG8Q99932 426 aaPredicted RBP17.42■□□□□ 0.38
SMARCD1-203ENST00000547247 DNAJC4Q9NNZ3 241 aa17.42■□□□□ 0.38
SMARCD1-203ENST00000547247 HELTA6NFD8 242 aa17.41■□□□□ 0.38
SMARCD1-203ENST00000547247 H3BRN7 92 aa17.41■□□□□ 0.38
SMARCD1-203ENST00000547247 CXCL2P19875 107 aa17.41■□□□□ 0.38
SMARCD1-203ENST00000547247 C10orf113Q5VZT2 155 aa17.41■□□□□ 0.38
SMARCD1-203ENST00000547247 RPL7L1Q6DKI1 246 aaKnown RBP17.41■□□□□ 0.38
SMARCD1-203ENST00000547247 SHANK2-AS3Q9BTD1 123 aa17.41■□□□□ 0.38
SMARCD1-203ENST00000547247 IGKV3-7A0A075B6H7 116 aa17.4■□□□□ 0.38
SMARCD1-203ENST00000547247 LINC00305Q7Z4B0 112 aa17.4■□□□□ 0.38
SMARCD1-203ENST00000547247 OR8I2Q8N0Y5 310 aa17.4■□□□□ 0.38
SMARCD1-203ENST00000547247 HSD17B11Q8NBQ5 300 aa17.4■□□□□ 0.38
SMARCD1-203ENST00000547247 PRR25Q96S07 402 aa17.4■□□□□ 0.38
SMARCD1-203ENST00000547247 SLC25A22Q9H936 323 aa17.4■□□□□ 0.38
SMARCD1-203ENST00000547247 RNF24Q9Y225 148 aa17.4■□□□□ 0.38
SMARCD1-203ENST00000547247 JTBO76095 146 aa17.4■□□□□ 0.38
SMARCD1-203ENST00000547247 PAFAH1B2P68402 229 aa17.4■□□□□ 0.38
SMARCD1-203ENST00000547247 SIGLEC15Q6ZMC9 328 aa17.4■□□□□ 0.38
SMARCD1-203ENST00000547247 GATAD1Q8WUU5 269 aa17.4■□□□□ 0.38
SMARCD1-203ENST00000547247 ARPC5LQ9BPX5 153 aa17.4■□□□□ 0.38
SMARCD1-203ENST00000547247 SCRT1Q9BWW7 348 aa17.4■□□□□ 0.38
SMARCD1-203ENST00000547247 TIMM9Q9Y5J7 89 aa17.4■□□□□ 0.38
SMARCD1-203ENST00000547247 PRB2P02812 416 aaPredicted RBP17.39■□□□□ 0.37
SMARCD1-203ENST00000547247 LEMD1Q68G75 181 aa17.39■□□□□ 0.37
SMARCD1-203ENST00000547247 ATP6V0CP27449 155 aa17.38■□□□□ 0.37
SMARCD1-203ENST00000547247 FFAR4Q5NUL3 377 aa17.38■□□□□ 0.37
SMARCD1-203ENST00000547247 GBGT1Q8N5D6 347 aa17.38■□□□□ 0.37
SMARCD1-203ENST00000547247 CYTL1Q9NRR1 136 aa17.38■□□□□ 0.37
SMARCD1-203ENST00000547247 AURKAIP1Q9NWT8 199 aaPredicted RBP17.38■□□□□ 0.37
SMARCD1-203ENST00000547247 KANTRA0A1W2PQU2 76 aa17.37■□□□□ 0.37
SMARCD1-203ENST00000547247 OR4C46A6NHA9 309 aa17.37■□□□□ 0.37
SMARCD1-203ENST00000547247 DNASE2O00115 360 aaPredicted RBP17.37■□□□□ 0.37
SMARCD1-203ENST00000547247 ZFP69Q49AA0 526 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms