RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 SMPXQ9UHP9 88 aa12.29□□□□□ -0.44
LIMS2-217ENST00000545738 SCGB2A1O75556 95 aa12.28□□□□□ -0.44
LIMS2-217ENST00000545738 DEFB114Q30KQ6 69 aa12.28□□□□□ -0.44
LIMS2-217ENST00000545738 CD300EQ496F6 205 aaPredicted RBP12.28□□□□□ -0.44
LIMS2-217ENST00000545738 GCSAMLQ5JQS6 135 aa12.28□□□□□ -0.44
LIMS2-217ENST00000545738 C9orf66Q5T8R8 295 aa12.28□□□□□ -0.44
LIMS2-217ENST00000545738 RPL7L1Q6DKI1 246 aaKnown RBP12.28□□□□□ -0.44
LIMS2-217ENST00000545738 TMEM37Q8WXS4 190 aa12.28□□□□□ -0.44
LIMS2-217ENST00000545738 UHRF2Q96PU4 802 aa12.28□□□□□ -0.44
LIMS2-217ENST00000545738 RHPN1-AS1Q9BWJ2 59 aa12.28□□□□□ -0.44
LIMS2-217ENST00000545738 MRPL27Q9P0M9 148 aaKnown RBP12.28□□□□□ -0.44
LIMS2-217ENST00000545738 ORM2P19652 201 aa12.28□□□□□ -0.44
LIMS2-217ENST00000545738 PLP1P60201 277 aa12.28□□□□□ -0.44
LIMS2-217ENST00000545738 MORN5Q5VZ52 161 aa12.28□□□□□ -0.44
LIMS2-217ENST00000545738 LINC00469Q8N7U9 141 aa12.28□□□□□ -0.44
LIMS2-217ENST00000545738 GINS3Q9BRX5 216 aa12.28□□□□□ -0.44
LIMS2-217ENST00000545738 MCRIP2Q9BUT9 160 aaKnown RBP12.28□□□□□ -0.44
LIMS2-217ENST00000545738 VSIRQ9H7M9 311 aa12.28□□□□□ -0.44
LIMS2-217ENST00000545738 PRKDCP78527 4128 aaKnown RBP12.27□□□□□ -0.45
LIMS2-217ENST00000545738 DFFBO76075 338 aa12.27□□□□□ -0.45
LIMS2-217ENST00000545738 NUP62P37198 522 aaPredicted RBP12.27□□□□□ -0.45
LIMS2-217ENST00000545738 ZNF345Q14585 488 aa12.27□□□□□ -0.45
LIMS2-217ENST00000545738 LGALSLQ3ZCW2 172 aaPredicted RBP12.27□□□□□ -0.45
LIMS2-217ENST00000545738 TMEM61Q8N0U2 210 aa12.27□□□□□ -0.45
LIMS2-217ENST00000545738 KCNRGQ8N5I3 272 aa12.27□□□□□ -0.45
LIMS2-217ENST00000545738 OR1B1Q8NGR6 318 aa12.27□□□□□ -0.45
LIMS2-217ENST00000545738 METTL26Q96S19 204 aa12.27□□□□□ -0.45
LIMS2-217ENST00000545738 PXMP4Q9Y6I8 212 aa12.27□□□□□ -0.45
LIMS2-217ENST00000545738 BUB3O43684 328 aa12.26□□□□□ -0.45
LIMS2-217ENST00000545738 NPPCP23582 126 aa12.26□□□□□ -0.45
LIMS2-217ENST00000545738 RPL29P47914 159 aaKnown RBP12.26□□□□□ -0.45
LIMS2-217ENST00000545738 SELENOTP62341 195 aa12.26□□□□□ -0.45
LIMS2-217ENST00000545738 LEMD1Q68G75 181 aa12.26□□□□□ -0.45
LIMS2-217ENST00000545738 PARD6GQ9BYG4 376 aaPredicted RBP12.26□□□□□ -0.45
LIMS2-217ENST00000545738 ARL6Q9H0F7 186 aa12.26□□□□□ -0.45
LIMS2-217ENST00000545738 RABAC1Q9UI14 185 aa12.26□□□□□ -0.45
LIMS2-217ENST00000545738 MPDU1O75352 247 aa12.25□□□□□ -0.45
LIMS2-217ENST00000545738 FABP1P07148 127 aa12.25□□□□□ -0.45
LIMS2-217ENST00000545738 NKX2-5P52952 324 aaPredicted RBP12.25□□□□□ -0.45
LIMS2-217ENST00000545738 EGFEM1PQ0D2K5 195 aa12.25□□□□□ -0.45
LIMS2-217ENST00000545738 BEAN1Q3B7T3 259 aa12.25□□□□□ -0.45
LIMS2-217ENST00000545738 FAM90A2PQ658T7 463 aa12.25□□□□□ -0.45
LIMS2-217ENST00000545738 LAMTOR1Q6IAA8 161 aa12.25□□□□□ -0.45
LIMS2-217ENST00000545738 HSD17B11Q8NBQ5 300 aa12.25□□□□□ -0.45
LIMS2-217ENST00000545738 MARC2Q969Z3 335 aa12.25□□□□□ -0.45
LIMS2-217ENST00000545738 SH3BGRL3Q9H299 93 aa12.25□□□□□ -0.45
LIMS2-217ENST00000545738 SLC39A9Q9NUM3 307 aa12.25□□□□□ -0.45
LIMS2-217ENST00000545738 INSL3P51460 131 aa12.25□□□□□ -0.45
LIMS2-217ENST00000545738 DYNLRB2Q8TF09 96 aa12.25□□□□□ -0.45
LIMS2-217ENST00000545738 GLMPQ8WWB7 406 aa12.25□□□□□ -0.45
LIMS2-217ENST00000545738 SCRT1Q9BWW7 348 aa12.25□□□□□ -0.45
LIMS2-217ENST00000545738 IFNA5P01569 189 aa12.24□□□□□ -0.45
LIMS2-217ENST00000545738 PRB2P02812 416 aaPredicted RBP12.24□□□□□ -0.45
LIMS2-217ENST00000545738 KPRPQ5T749 579 aaPredicted RBP12.24□□□□□ -0.45
LIMS2-217ENST00000545738 C17orf77Q96MU5 243 aa12.24□□□□□ -0.45
LIMS2-217ENST00000545738 ARV1Q9H2C2 271 aa12.24□□□□□ -0.45
LIMS2-217ENST00000545738 ZNF785A8K8V0 405 aa12.23□□□□□ -0.45
LIMS2-217ENST00000545738 H3BRN7 92 aa12.23□□□□□ -0.45
LIMS2-217ENST00000545738 HYPMO75409 117 aa12.23□□□□□ -0.45
LIMS2-217ENST00000545738 OR5G3P0C626 314 aa12.23□□□□□ -0.45
LIMS2-217ENST00000545738 ATP6V0CP27449 155 aa12.23□□□□□ -0.45
LIMS2-217ENST00000545738 RAB31Q13636 194 aa12.23□□□□□ -0.45
LIMS2-217ENST00000545738 ZNF266Q14584 549 aa12.23□□□□□ -0.45
LIMS2-217ENST00000545738 C16orf54Q6UWD8 224 aa12.23□□□□□ -0.45
LIMS2-217ENST00000545738 TMUB2Q71RG4 321 aa12.23□□□□□ -0.45
LIMS2-217ENST00000545738 C9orf62Q8N4C0 152 aa12.23□□□□□ -0.45
LIMS2-217ENST00000545738 SLC25A39Q9BZJ4 359 aaPredicted RBP12.23□□□□□ -0.45
LIMS2-217ENST00000545738 ZNF98A6NK75 572 aa12.23□□□□□ -0.45
LIMS2-217ENST00000545738 EIF3GO75821 320 aaKnown RBP eCLIP12.23□□□□□ -0.45
LIMS2-217ENST00000545738 CFDP00746 253 aaPredicted RBP12.23□□□□□ -0.45
LIMS2-217ENST00000545738 ZFP69Q49AA0 526 aa12.23□□□□□ -0.45
LIMS2-217ENST00000545738 HYLS1Q96M11 299 aa12.23□□□□□ -0.45
LIMS2-217ENST00000545738 TECRQ9NZ01 308 aaKnown RBP12.23□□□□□ -0.45
LIMS2-217ENST00000545738 FBN3Q75N90 2809 aa12.22□□□□□ -0.45
LIMS2-217ENST00000545738 IGKV3-7A0A075B6H7 116 aa12.22□□□□□ -0.45
LIMS2-217ENST00000545738 BCL2L11O43521 198 aa12.22□□□□□ -0.45
LIMS2-217ENST00000545738 SPATA31B1PQ5VZV4 182 aa12.22□□□□□ -0.45
LIMS2-217ENST00000545738 SCGB1C1Q8TD33 95 aa12.22□□□□□ -0.45
LIMS2-217ENST00000545738 SHANK2-AS3Q9BTD1 123 aa12.22□□□□□ -0.45
LIMS2-217ENST00000545738 HIGD1AQ9Y241 93 aa12.22□□□□□ -0.45
LIMS2-217ENST00000545738 TRAV5A0A0B4J249 113 aa12.21□□□□□ -0.45
LIMS2-217ENST00000545738 A0A0D9SG52 128 aa12.21□□□□□ -0.45
LIMS2-217ENST00000545738 S100A12P80511 92 aa12.21□□□□□ -0.45
LIMS2-217ENST00000545738 TCF24Q7RTU0 167 aa12.21□□□□□ -0.45
LIMS2-217ENST00000545738 LINC00305Q7Z4B0 112 aa12.21□□□□□ -0.45
LIMS2-217ENST00000545738 PRR25Q96S07 402 aa12.21□□□□□ -0.45
LIMS2-217ENST00000545738 SLC25A32Q9H2D1 315 aa12.21□□□□□ -0.45
LIMS2-217ENST00000545738 SLC25A22Q9H936 323 aa12.21□□□□□ -0.45
LIMS2-217ENST00000545738 SEPSECSQ9HD40 501 aaKnown RBP12.21□□□□□ -0.45
LIMS2-217ENST00000545738 PLA2G2EQ9NZK7 142 aa12.21□□□□□ -0.45
LIMS2-217ENST00000545738 ZNF256Q9Y2P7 627 aaPredicted RBP12.21□□□□□ -0.45
LIMS2-217ENST00000545738 SMAD5-AS1Q9Y6J3 95 aa12.21□□□□□ -0.45
LIMS2-217ENST00000545738 COX7A2P2O60397 106 aa12.2□□□□□ -0.46
LIMS2-217ENST00000545738 FFAR4Q5NUL3 377 aa12.2□□□□□ -0.46
LIMS2-217ENST00000545738 Q6ZRG5 221 aa12.2□□□□□ -0.46
LIMS2-217ENST00000545738 GBGT1Q8N5D6 347 aa12.2□□□□□ -0.46
LIMS2-217ENST00000545738 DNAJC4Q9NNZ3 241 aa12.2□□□□□ -0.46
LIMS2-217ENST00000545738 TAAR5O14804 337 aa12.2□□□□□ -0.46
LIMS2-217ENST00000545738 TSPAN4O14817 238 aa12.2□□□□□ -0.46
LIMS2-217ENST00000545738 MRPS12O15235 138 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms