RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.71□□□□□ -1.66
VPS50-220ENST00000544910 HBDP02042 147 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 PRB3Q04118 309 aaPredicted RBP4.71□□□□□ -1.66
VPS50-220ENST00000544910 PRSS8Q16651 343 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 PPP1R27Q86WC6 154 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 CIARTQ8N365 385 aaPredicted RBP4.71□□□□□ -1.66
VPS50-220ENST00000544910 METTL26Q96S19 204 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 KIR2DL4Q99706 377 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 SNHG12Q9BXW3 62 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 TRBV20OR9-2A0A075B6H5 130 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 HIGD1CA8MV81 97 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 DLX6P56179 175 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 GPR82Q96P67 336 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 FAM215AQ9Y5M1 114 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 EXPH5Q8NEV8 1989 aa4.71□□□□□ -1.66
VPS50-220ENST00000544910 CEACAM4O75871 244 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 DPM2O94777 84 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 IGHV3-23P01764 117 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 C10orf55Q5SWW7 151 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 OR13C6PQ8NH95 151 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 FOXC2Q99958 501 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 ZNRD1Q9P1U0 126 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 MMP23AO75900 390 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 LHBP01229 141 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 GPX1P07203 203 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 SPRNQ5BIV9 151 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 IGF2-ASQ6U949 168 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 ODF3L1Q8IXM7 274 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 TSKUQ8WUA8 353 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 NDUFA4L2Q9NRX3 87 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 KNL1Q8NG31 2342 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 LINC01549A6NIU2 74 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 PPBPP02775 128 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 PSG1P11464 419 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 CX3CL1P78423 397 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 OR10J6PQ8NGY7 276 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 EEF1AKMT3Q96AZ1 226 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 ZNF48Q96MX3 618 aaPredicted RBP4.7□□□□□ -1.66
VPS50-220ENST00000544910 LYNX1G3V0Z9 82 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.7□□□□□ -1.66
VPS50-220ENST00000544910 BUB1B-PAK6H3BSN5 160 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 LYNX1P0DP58 116 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 PIMREGQ9BSJ6 248 aa4.7□□□□□ -1.66
VPS50-220ENST00000544910 SSBP2P81877 361 aaPredicted RBP4.69□□□□□ -1.66
VPS50-220ENST00000544910 ATP5G2Q06055 141 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 RNF5Q99942 180 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 SPANXCQ9NY87 97 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 PHLDA3Q9Y5J5 127 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 ASXL3Q9C0F0 2248 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 PMS2P5A8MQ11 134 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 C19orf54Q5BKX5 351 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 SCGB3A1Q96QR1 104 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 GTSF1LQ9H1H1 148 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 NXT2Q9NPJ8 142 aaKnown RBP4.69□□□□□ -1.66
VPS50-220ENST00000544910 BEX4Q9NWD9 120 aaPredicted RBP4.69□□□□□ -1.66
VPS50-220ENST00000544910 POLR3KQ9Y2Y1 108 aaPredicted RBP4.69□□□□□ -1.66
VPS50-220ENST00000544910 S4R3C0 116 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 TIMM23O14925 209 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 THBDP07204 575 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 CDKN1BP46527 198 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 Q0VG73 95 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 TM4SF20Q53R12 229 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 LHFPL4Q7Z7J7 247 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 WT1P19544 449 aaPredicted RBP4.69□□□□□ -1.66
VPS50-220ENST00000544910 MPV17L2Q567V2 206 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 MRAP2Q96G30 205 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 C21orf62Q9NYP8 219 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 E7EQL1 145 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 C3orf79P0CE67 100 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 ZNF672Q499Z4 452 aaPredicted RBP4.69□□□□□ -1.66
VPS50-220ENST00000544910 RNF125Q96EQ8 232 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 C18orf15Q96N68 181 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 FBXL7Q9UJT9 491 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 SEC16AO15027 2179 aa4.69□□□□□ -1.66
VPS50-220ENST00000544910 IGKCP01834 107 aa4.68□□□□□ -1.66
VPS50-220ENST00000544910 PDLIM4P50479 330 aa4.68□□□□□ -1.66
VPS50-220ENST00000544910 MLANAQ16655 118 aa4.68□□□□□ -1.66
VPS50-220ENST00000544910 TMEM256Q8N2U0 113 aa4.68□□□□□ -1.66
VPS50-220ENST00000544910 LINC00311Q8N616 119 aa4.68□□□□□ -1.66
VPS50-220ENST00000544910 A0A1W2PS18 150 aa4.68□□□□□ -1.66
VPS50-220ENST00000544910 NPSP0C0P6 89 aa4.68□□□□□ -1.66
VPS50-220ENST00000544910 SPINK8P0C7L1 97 aa4.68□□□□□ -1.66
VPS50-220ENST00000544910 GUSBP1Q15486 140 aa4.68□□□□□ -1.66
VPS50-220ENST00000544910 POU2AF1Q16633 256 aa4.68□□□□□ -1.66
VPS50-220ENST00000544910 C16orf92Q96LL3 132 aa4.68□□□□□ -1.66
VPS50-220ENST00000544910 SLC25A39Q9BZJ4 359 aaPredicted RBP4.68□□□□□ -1.66
VPS50-220ENST00000544910 LEPP41159 167 aa4.68□□□□□ -1.66
VPS50-220ENST00000544910 TMEM155Q4W5P6 130 aa4.68□□□□□ -1.66
VPS50-220ENST00000544910 TMEM170BQ5T4T1 132 aa4.68□□□□□ -1.66
VPS50-220ENST00000544910 OR5AN1Q8NGI8 311 aa4.68□□□□□ -1.66
VPS50-220ENST00000544910 DKK4Q9UBT3 224 aa4.68□□□□□ -1.66
VPS50-220ENST00000544910 SIGLEC9Q9Y336 463 aa4.68□□□□□ -1.66
VPS50-220ENST00000544910 PCNX3Q9H6A9 2034 aa4.68□□□□□ -1.66
VPS50-220ENST00000544910 ALPK2Q86TB3 2170 aa4.68□□□□□ -1.66
VPS50-220ENST00000544910 RHOGP84095 191 aa4.68□□□□□ -1.66
VPS50-220ENST00000544910 ZNF114Q8NC26 417 aa4.68□□□□□ -1.66
VPS50-220ENST00000544910 DLX4Q92988 240 aaPredicted RBP4.68□□□□□ -1.66
VPS50-220ENST00000544910 ATP6V0BQ99437 205 aa4.68□□□□□ -1.66
VPS50-220ENST00000544910 YAE1D1Q9NRH1 226 aa4.68□□□□□ -1.66
VPS50-220ENST00000544910 A0A1W2PPI3 338 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 236.7 ms