RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 C17orf112F2Z3M2 114 aa9.92□□□□□ -0.82
DDX11-227ENST00000544652 HNRNPCP07910 306 aaKnown RBP eCLIP9.92□□□□□ -0.82
DDX11-227ENST00000544652 FOLR2P14207 255 aa9.92□□□□□ -0.82
DDX11-227ENST00000544652 NPPCP23582 126 aa9.92□□□□□ -0.82
DDX11-227ENST00000544652 MIC13Q5XKP0 118 aa9.92□□□□□ -0.82
DDX11-227ENST00000544652 LAMTOR1Q6IAA8 161 aa9.92□□□□□ -0.82
DDX11-227ENST00000544652 METTL26Q96S19 204 aa9.92□□□□□ -0.82
DDX11-227ENST00000544652 PSMG3Q9BT73 122 aaPredicted RBP9.92□□□□□ -0.82
DDX11-227ENST00000544652 RSG1Q9BU20 258 aa9.92□□□□□ -0.82
DDX11-227ENST00000544652 ARL6Q9H0F7 186 aa9.92□□□□□ -0.82
DDX11-227ENST00000544652 VSIRQ9H7M9 311 aa9.92□□□□□ -0.82
DDX11-227ENST00000544652 KCNIP2Q9NS61 270 aa9.92□□□□□ -0.82
DDX11-227ENST00000544652 SLC39A9Q9NUM3 307 aa9.92□□□□□ -0.82
DDX11-227ENST00000544652 SMPXQ9UHP9 88 aa9.92□□□□□ -0.82
DDX11-227ENST00000544652 RABAC1Q9UI14 185 aa9.92□□□□□ -0.82
DDX11-227ENST00000544652 PXMP4Q9Y6I8 212 aa9.92□□□□□ -0.82
DDX11-227ENST00000544652 KANTRA0A1W2PQU2 76 aa9.91□□□□□ -0.82
DDX11-227ENST00000544652 SEC14L6B5MCN3 397 aa9.91□□□□□ -0.82
DDX11-227ENST00000544652 ZNF207O43670 478 aaKnown RBP9.91□□□□□ -0.82
DDX11-227ENST00000544652 INSL3P51460 131 aa9.91□□□□□ -0.82
DDX11-227ENST00000544652 LYZP61626 148 aa9.91□□□□□ -0.82
DDX11-227ENST00000544652 B2MP61769 119 aa9.91□□□□□ -0.82
DDX11-227ENST00000544652 C9orf66Q5T8R8 295 aa9.91□□□□□ -0.82
DDX11-227ENST00000544652 PATE2Q6UY27 113 aa9.91□□□□□ -0.82
DDX11-227ENST00000544652 CHEK1O14757 476 aa9.9□□□□□ -0.82
DDX11-227ENST00000544652 BUB3O43684 328 aa9.9□□□□□ -0.82
DDX11-227ENST00000544652 HYPMO75409 117 aa9.9□□□□□ -0.82
DDX11-227ENST00000544652 IGLV1-51P01701 117 aa9.9□□□□□ -0.82
DDX11-227ENST00000544652 APOHP02749 345 aaPredicted RBP9.9□□□□□ -0.82
DDX11-227ENST00000544652 IGLL1P15814 213 aa9.9□□□□□ -0.82
DDX11-227ENST00000544652 ATP6V0CP27449 155 aa9.9□□□□□ -0.82
DDX11-227ENST00000544652 Q6ZRG5 221 aa9.9□□□□□ -0.82
DDX11-227ENST00000544652 ZNF709Q8N972 641 aa9.9□□□□□ -0.82
DDX11-227ENST00000544652 HSD17B11Q8NBQ5 300 aa9.9□□□□□ -0.82
DDX11-227ENST00000544652 OR2G3Q8NGZ4 309 aa9.9□□□□□ -0.82
DDX11-227ENST00000544652 TMEM37Q8WXS4 190 aa9.9□□□□□ -0.82
DDX11-227ENST00000544652 PBDC1Q9BVG4 233 aa9.9□□□□□ -0.82
DDX11-227ENST00000544652 TECRQ9NZ01 308 aaKnown RBP9.9□□□□□ -0.82
DDX11-227ENST00000544652 MLXQ9UH92 298 aa9.9□□□□□ -0.82
DDX11-227ENST00000544652 TRRAPQ9Y4A5 3859 aa9.9□□□□□ -0.83
DDX11-227ENST00000544652 A0A1W2PS18 150 aa9.89□□□□□ -0.83
DDX11-227ENST00000544652 SAP30O75446 220 aa9.89□□□□□ -0.83
DDX11-227ENST00000544652 ORM2P19652 201 aa9.89□□□□□ -0.83
DDX11-227ENST00000544652 SERF2P84101 59 aa9.89□□□□□ -0.83
DDX11-227ENST00000544652 DEFB114Q30KQ6 69 aa9.89□□□□□ -0.83
DDX11-227ENST00000544652 C16orf54Q6UWD8 224 aa9.89□□□□□ -0.83
DDX11-227ENST00000544652 OR1B1Q8NGR6 318 aa9.89□□□□□ -0.83
DDX11-227ENST00000544652 STOML3Q8TAV4 291 aa9.89□□□□□ -0.83
DDX11-227ENST00000544652 GATAD1Q8WUU5 269 aa9.89□□□□□ -0.83
DDX11-227ENST00000544652 ST8SIA2Q92186 375 aa9.89□□□□□ -0.83
DDX11-227ENST00000544652 GNPNAT1Q96EK6 184 aaPredicted RBP9.89□□□□□ -0.83
DDX11-227ENST00000544652 PFDN5Q99471 154 aa9.89□□□□□ -0.83
DDX11-227ENST00000544652 RHPN1-AS1Q9BWJ2 59 aa9.89□□□□□ -0.83
DDX11-227ENST00000544652 GPR61Q9BZJ8 451 aa9.89□□□□□ -0.83
DDX11-227ENST00000544652 DNAJC4Q9NNZ3 241 aa9.89□□□□□ -0.83
DDX11-227ENST00000544652 RFNGQ9Y644 331 aa9.89□□□□□ -0.83
DDX11-227ENST00000544652 CMYA5Q8N3K9 4069 aa9.88□□□□□ -0.83
DDX11-227ENST00000544652 IGHV3-49A0A0A0MS15 119 aa9.88□□□□□ -0.83
DDX11-227ENST00000544652 H3BRN7 92 aa9.88□□□□□ -0.83
DDX11-227ENST00000544652 OR5G3P0C626 314 aa9.88□□□□□ -0.83
DDX11-227ENST00000544652 SPP1P10451 314 aa9.88□□□□□ -0.83
DDX11-227ENST00000544652 S100A7P31151 101 aa9.88□□□□□ -0.83
DDX11-227ENST00000544652 BMI1P35226 326 aa9.88□□□□□ -0.83
DDX11-227ENST00000544652 NKX2-5P52952 324 aaPredicted RBP9.88□□□□□ -0.83
DDX11-227ENST00000544652 C1orf194Q5T5A4 169 aa9.88□□□□□ -0.83
DDX11-227ENST00000544652 FAM90A2PQ658T7 463 aa9.88□□□□□ -0.83
DDX11-227ENST00000544652 OR1L4Q8NGR5 311 aa9.88□□□□□ -0.83
DDX11-227ENST00000544652 OR2K2Q8NGT1 345 aa9.88□□□□□ -0.83
DDX11-227ENST00000544652 GLMPQ8WWB7 406 aa9.88□□□□□ -0.83
DDX11-227ENST00000544652 NARS2Q96I59 477 aaKnown RBP9.88□□□□□ -0.83
DDX11-227ENST00000544652 SHANK2-AS3Q9BTD1 123 aa9.88□□□□□ -0.83
DDX11-227ENST00000544652 ZNF471Q9BX82 626 aaPredicted RBP9.88□□□□□ -0.83
DDX11-227ENST00000544652 SLC25A39Q9BZJ4 359 aaPredicted RBP9.88□□□□□ -0.83
DDX11-227ENST00000544652 TMEM231Q9H6L2 316 aa9.88□□□□□ -0.83
DDX11-227ENST00000544652 DOK5Q9P104 306 aa9.88□□□□□ -0.83
DDX11-227ENST00000544652 HIGD1AQ9Y241 93 aa9.88□□□□□ -0.83
DDX11-227ENST00000544652 VWFP04275 2813 aa9.88□□□□□ -0.83
DDX11-227ENST00000544652 ZNF98A6NK75 572 aa9.87□□□□□ -0.83
DDX11-227ENST00000544652 LCE2BO14633 110 aa9.87□□□□□ -0.83
DDX11-227ENST00000544652 COX7A2P2O60397 106 aa9.87□□□□□ -0.83
DDX11-227ENST00000544652 EIF5AP63241 154 aaKnown RBP9.87□□□□□ -0.83
DDX11-227ENST00000544652 FFAR4Q5NUL3 377 aa9.87□□□□□ -0.83
DDX11-227ENST00000544652 C10orf113Q5VZT2 155 aa9.87□□□□□ -0.83
DDX11-227ENST00000544652 S100A7AQ86SG5 101 aa9.87□□□□□ -0.83
DDX11-227ENST00000544652 DYNLRB2Q8TF09 96 aa9.87□□□□□ -0.83
DDX11-227ENST00000544652 UHRF2Q96PU4 802 aa9.87□□□□□ -0.83
DDX11-227ENST00000544652 RNF2Q99496 336 aa9.87□□□□□ -0.83
DDX11-227ENST00000544652 SH3BGRL3Q9H299 93 aa9.87□□□□□ -0.83
DDX11-227ENST00000544652 IGHV3OR16-13A0A075B7E8 117 aa9.86□□□□□ -0.83
DDX11-227ENST00000544652 IGHV3-74A0A0B4J1X5 117 aa9.86□□□□□ -0.83
DDX11-227ENST00000544652 TRAV25A0A0B4J276 109 aa9.86□□□□□ -0.83
DDX11-227ENST00000544652 CD5P06127 495 aa9.86□□□□□ -0.83
DDX11-227ENST00000544652 SEC11BP0C7V7 166 aa9.86□□□□□ -0.83
DDX11-227ENST00000544652 TPT1P13693 172 aaKnown RBP9.86□□□□□ -0.83
DDX11-227ENST00000544652 C4BPBP20851 252 aa9.86□□□□□ -0.83
DDX11-227ENST00000544652 EGFEM1PQ0D2K5 195 aa9.86□□□□□ -0.83
DDX11-227ENST00000544652 CD300EQ496F6 205 aaPredicted RBP9.86□□□□□ -0.83
DDX11-227ENST00000544652 GCSAMLQ5JQS6 135 aa9.86□□□□□ -0.83
DDX11-227ENST00000544652 LINC00305Q7Z4B0 112 aa9.86□□□□□ -0.83
DDX11-227ENST00000544652 SLC51BQ86UW2 128 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms