RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 NHLH2Q02577 135 aa14.21□□□□□ -0.13
DDX55-211ENST00000544429 C1orf194Q5T5A4 169 aa14.21□□□□□ -0.13
DDX55-211ENST00000544429 GBGT1Q8N5D6 347 aa14.21□□□□□ -0.13
DDX55-211ENST00000544429 MGST2Q99735 147 aa14.21□□□□□ -0.13
DDX55-211ENST00000544429 UQCC1Q9NVA1 299 aa14.21□□□□□ -0.13
DDX55-211ENST00000544429 IGKV3-7A0A075B6H7 116 aa14.2□□□□□ -0.14
DDX55-211ENST00000544429 AGPAT2O15120 278 aa14.2□□□□□ -0.14
DDX55-211ENST00000544429 PET100P0DJ07 73 aa14.2□□□□□ -0.14
DDX55-211ENST00000544429 AP2S1P53680 142 aaPredicted RBP14.2□□□□□ -0.14
DDX55-211ENST00000544429 HBG1P69891 147 aa14.2□□□□□ -0.14
DDX55-211ENST00000544429 HBG2P69892 147 aa14.2□□□□□ -0.14
DDX55-211ENST00000544429 CHAC2Q8WUX2 184 aa14.2□□□□□ -0.14
DDX55-211ENST00000544429 TMEM147Q9BVK8 224 aa14.2□□□□□ -0.14
DDX55-211ENST00000544429 SLC25A31Q9H0C2 315 aa14.2□□□□□ -0.14
DDX55-211ENST00000544429 MED28Q9H204 178 aa14.2□□□□□ -0.14
DDX55-211ENST00000544429 SRD5A3Q9H8P0 318 aa14.2□□□□□ -0.14
DDX55-211ENST00000544429 PFDN2Q9UHV9 154 aa14.2□□□□□ -0.14
DDX55-211ENST00000544429 LINC00869P0C866 280 aa14.19□□□□□ -0.14
DDX55-211ENST00000544429 BAXQ07812 192 aa14.19□□□□□ -0.14
DDX55-211ENST00000544429 ATP6V1FQ16864 119 aa14.19□□□□□ -0.14
DDX55-211ENST00000544429 SIGLEC15Q6ZMC9 328 aa14.19□□□□□ -0.14
DDX55-211ENST00000544429 ZNF546Q86UE3 836 aa14.19□□□□□ -0.14
DDX55-211ENST00000544429 FAM24BQ8N5W8 94 aa14.19□□□□□ -0.14
DDX55-211ENST00000544429 TM2D3Q9BRN9 247 aa14.19□□□□□ -0.14
DDX55-211ENST00000544429 TUBA4BQ9H853 241 aa14.19□□□□□ -0.14
DDX55-211ENST00000544429 MAP6D1Q9H9H5 199 aa14.19□□□□□ -0.14
DDX55-211ENST00000544429 UBQLN2Q9UHD9 624 aa14.19□□□□□ -0.14
DDX55-211ENST00000544429 TFPI2P48307 235 aa14.18□□□□□ -0.14
DDX55-211ENST00000544429 CMC4P56277 68 aaPredicted RBP14.18□□□□□ -0.14
DDX55-211ENST00000544429 HAGHQ16775 308 aa14.18□□□□□ -0.14
DDX55-211ENST00000544429 ASCL2Q99929 193 aa14.18□□□□□ -0.14
DDX55-211ENST00000544429 MBD2Q9UBB5 411 aa14.18□□□□□ -0.14
DDX55-211ENST00000544429 TENM3Q9P273 2699 aa14.18□□□□□ -0.14
DDX55-211ENST00000544429 ZNF98A6NK75 572 aa14.17□□□□□ -0.14
DDX55-211ENST00000544429 ORM2P19652 201 aa14.17□□□□□ -0.14
DDX55-211ENST00000544429 RPL11P62913 178 aaKnown RBP14.17□□□□□ -0.14
DDX55-211ENST00000544429 PRR20EP86478 221 aa14.17□□□□□ -0.14
DDX55-211ENST00000544429 PRR20CP86479 221 aa14.17□□□□□ -0.14
DDX55-211ENST00000544429 PRR20DP86480 221 aa14.17□□□□□ -0.14
DDX55-211ENST00000544429 PRR20BP86481 221 aa14.17□□□□□ -0.14
DDX55-211ENST00000544429 PRR20AP86496 221 aa14.17□□□□□ -0.14
DDX55-211ENST00000544429 PXDC1Q5TGL8 231 aa14.17□□□□□ -0.14
DDX55-211ENST00000544429 PATE2Q6UY27 113 aa14.17□□□□□ -0.14
DDX55-211ENST00000544429 STXBP6Q8NFX7 210 aa14.17□□□□□ -0.14
DDX55-211ENST00000544429 OR5C1Q8NGR4 320 aa14.17□□□□□ -0.14
DDX55-211ENST00000544429 ASB13Q8WXK3 278 aa14.17□□□□□ -0.14
DDX55-211ENST00000544429 GGTLC1Q9BX51 225 aa14.17□□□□□ -0.14
DDX55-211ENST00000544429 FBXL17Q9UF56 701 aa14.17□□□□□ -0.14
DDX55-211ENST00000544429 H3BRN7 92 aa14.16□□□□□ -0.14
DDX55-211ENST00000544429 DNASE2O00115 360 aaPredicted RBP14.16□□□□□ -0.14
DDX55-211ENST00000544429 GIPP09681 153 aaPredicted RBP14.16□□□□□ -0.14
DDX55-211ENST00000544429 OR1B1Q8NGR6 318 aa14.16□□□□□ -0.14
DDX55-211ENST00000544429 C17orf77Q96MU5 243 aa14.16□□□□□ -0.14
DDX55-211ENST00000544429 SHANK2-AS3Q9BTD1 123 aa14.16□□□□□ -0.14
DDX55-211ENST00000544429 SLC25A39Q9BZJ4 359 aaPredicted RBP14.16□□□□□ -0.14
DDX55-211ENST00000544429 SEPSECSQ9HD40 501 aaKnown RBP14.16□□□□□ -0.14
DDX55-211ENST00000544429 NRN1Q9NPD7 142 aa14.16□□□□□ -0.14
DDX55-211ENST00000544429 STAB2Q8WWQ8 2551 aa14.16□□□□□ -0.14
DDX55-211ENST00000544429 UBE2L5PA0A1B0GUS4 154 aa14.15□□□□□ -0.14
DDX55-211ENST00000544429 HYPMO75409 117 aa14.15□□□□□ -0.14
DDX55-211ENST00000544429 CAMLGP49069 296 aa14.15□□□□□ -0.14
DDX55-211ENST00000544429 OPCMLQ14982 345 aa14.15□□□□□ -0.14
DDX55-211ENST00000544429 WFDC3Q8IUB2 231 aa14.15□□□□□ -0.14
DDX55-211ENST00000544429 APRG1Q8IVJ8 170 aa14.15□□□□□ -0.14
DDX55-211ENST00000544429 SLC25A32Q9H2D1 315 aa14.15□□□□□ -0.14
DDX55-211ENST00000544429 HSPB11Q9Y547 144 aa14.15□□□□□ -0.14
DDX55-211ENST00000544429 SOCS3O14543 225 aa14.14□□□□□ -0.15
DDX55-211ENST00000544429 MPDU1O75352 247 aa14.14□□□□□ -0.15
DDX55-211ENST00000544429 RPL29P47914 159 aaKnown RBP14.14□□□□□ -0.15
DDX55-211ENST00000544429 RAB31Q13636 194 aa14.14□□□□□ -0.15
DDX55-211ENST00000544429 ZNF124Q15973 351 aa14.14□□□□□ -0.15
DDX55-211ENST00000544429 SCRT1Q9BWW7 348 aa14.14□□□□□ -0.15
DDX55-211ENST00000544429 ARL6Q9H0F7 186 aa14.14□□□□□ -0.15
DDX55-211ENST00000544429 DOK5Q9P104 306 aa14.14□□□□□ -0.15
DDX55-211ENST00000544429 HIGD1AQ9Y241 93 aa14.14□□□□□ -0.15
DDX55-211ENST00000544429 NBEAL2Q6ZNJ1 2754 aa14.13□□□□□ -0.15
DDX55-211ENST00000544429 AGRNO00468 2067 aa14.13□□□□□ -0.15
DDX55-211ENST00000544429 RPL12P30050 165 aaKnown RBP14.13□□□□□ -0.15
DDX55-211ENST00000544429 S100A7P31151 101 aa14.13□□□□□ -0.15
DDX55-211ENST00000544429 OR8I2Q8N0Y5 310 aa14.13□□□□□ -0.15
DDX55-211ENST00000544429 TMEM37Q8WXS4 190 aa14.13□□□□□ -0.15
DDX55-211ENST00000544429 GPR82Q96P67 336 aa14.13□□□□□ -0.15
DDX55-211ENST00000544429 UHRF2Q96PU4 802 aa14.13□□□□□ -0.15
DDX55-211ENST00000544429 ARV1Q9H2C2 271 aa14.13□□□□□ -0.15
DDX55-211ENST00000544429 LOC102724200A0A096LPH7 203 aaPredicted RBP14.12□□□□□ -0.15
DDX55-211ENST00000544429 FGF7P21781 194 aa14.12□□□□□ -0.15
DDX55-211ENST00000544429 DEFB131AP59861 70 aa14.12□□□□□ -0.15
DDX55-211ENST00000544429 RAP2BP61225 183 aa14.12□□□□□ -0.15
DDX55-211ENST00000544429 Q5BKY6 102 aa14.12□□□□□ -0.15
DDX55-211ENST00000544429 MIC13Q5XKP0 118 aa14.12□□□□□ -0.15
DDX55-211ENST00000544429 THAP6Q8TBB0 222 aa14.12□□□□□ -0.15
DDX55-211ENST00000544429 PPP1R14BQ96C90 147 aa14.12□□□□□ -0.15
DDX55-211ENST00000544429 NPCDR1Q9BY65 106 aa14.12□□□□□ -0.15
DDX55-211ENST00000544429 ELOA3CA0A087WX78 387 aaPredicted RBP14.11□□□□□ -0.15
DDX55-211ENST00000544429 KIR2DL5BA0A0G2JN68 375 aa14.11□□□□□ -0.15
DDX55-211ENST00000544429 KIR2DL5BA0A0G2JPC4 375 aa14.11□□□□□ -0.15
DDX55-211ENST00000544429 G3V3Q6 166 aa14.11□□□□□ -0.15
DDX55-211ENST00000544429 MRPS12O15235 138 aaKnown RBP14.11□□□□□ -0.15
DDX55-211ENST00000544429 OR5G3P0C626 314 aa14.11□□□□□ -0.15
DDX55-211ENST00000544429 ZNF688P0C7X2 276 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms