RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 HYPMO75409 117 aa10.94□□□□□ -0.66
TNFRSF1A-216ENST00000543995 S100A7P31151 101 aa10.94□□□□□ -0.66
TNFRSF1A-216ENST00000543995 RPL29P47914 159 aaKnown RBP10.94□□□□□ -0.66
TNFRSF1A-216ENST00000543995 B2MP61769 119 aa10.94□□□□□ -0.66
TNFRSF1A-216ENST00000543995 EGFEM1PQ0D2K5 195 aa10.94□□□□□ -0.66
TNFRSF1A-216ENST00000543995 OPCMLQ14982 345 aa10.94□□□□□ -0.66
TNFRSF1A-216ENST00000543995 BEAN1Q3B7T3 259 aa10.94□□□□□ -0.66
TNFRSF1A-216ENST00000543995 LAMTOR1Q6IAA8 161 aa10.94□□□□□ -0.66
TNFRSF1A-216ENST00000543995 VSIRQ9H7M9 311 aa10.94□□□□□ -0.66
TNFRSF1A-216ENST00000543995 HIGD1AQ9Y241 93 aa10.94□□□□□ -0.66
TNFRSF1A-216ENST00000543995 PXMP4Q9Y6I8 212 aa10.94□□□□□ -0.66
TNFRSF1A-216ENST00000543995 IZUMO1RA6ND01 250 aa10.93□□□□□ -0.66
TNFRSF1A-216ENST00000543995 PLP1P60201 277 aa10.93□□□□□ -0.66
TNFRSF1A-216ENST00000543995 RPL11P62913 178 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-216ENST00000543995 GUCA2BQ16661 112 aa10.93□□□□□ -0.66
TNFRSF1A-216ENST00000543995 PXDC1Q5TGL8 231 aa10.93□□□□□ -0.66
TNFRSF1A-216ENST00000543995 TMEM61Q8N0U2 210 aa10.93□□□□□ -0.66
TNFRSF1A-216ENST00000543995 RSG1Q9BU20 258 aa10.93□□□□□ -0.66
TNFRSF1A-216ENST00000543995 KCNIP2Q9NS61 270 aa10.93□□□□□ -0.66
TNFRSF1A-216ENST00000543995 SLC39A9Q9NUM3 307 aa10.93□□□□□ -0.66
TNFRSF1A-216ENST00000543995 ZNF256Q9Y2P7 627 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF1A-216ENST00000543995 PKD1L1Q8TDX9 2849 aa10.92□□□□□ -0.66
TNFRSF1A-216ENST00000543995 IGKV3-7A0A075B6H7 116 aa10.92□□□□□ -0.66
TNFRSF1A-216ENST00000543995 BORCS7-ASMTA0A0B4J1R7 106 aa10.92□□□□□ -0.66
TNFRSF1A-216ENST00000543995 BUB3O43684 328 aa10.92□□□□□ -0.66
TNFRSF1A-216ENST00000543995 COX7A2P2O60397 106 aa10.92□□□□□ -0.66
TNFRSF1A-216ENST00000543995 PFDN1O60925 122 aa10.92□□□□□ -0.66
TNFRSF1A-216ENST00000543995 C1QBP02746 253 aa10.92□□□□□ -0.66
TNFRSF1A-216ENST00000543995 KRTAP10-11P60412 298 aa10.92□□□□□ -0.66
TNFRSF1A-216ENST00000543995 PRR20EP86478 221 aa10.92□□□□□ -0.66
TNFRSF1A-216ENST00000543995 PRR20CP86479 221 aa10.92□□□□□ -0.66
TNFRSF1A-216ENST00000543995 PRR20DP86480 221 aa10.92□□□□□ -0.66
TNFRSF1A-216ENST00000543995 PRR20BP86481 221 aa10.92□□□□□ -0.66
TNFRSF1A-216ENST00000543995 PRR20AP86496 221 aa10.92□□□□□ -0.66
TNFRSF1A-216ENST00000543995 ZNF345Q14585 488 aa10.92□□□□□ -0.66
TNFRSF1A-216ENST00000543995 TCF24Q7RTU0 167 aa10.92□□□□□ -0.66
TNFRSF1A-216ENST00000543995 S100A7AQ86SG5 101 aa10.92□□□□□ -0.66
TNFRSF1A-216ENST00000543995 PARD6GQ9BYG4 376 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF1A-216ENST00000543995 ARV1Q9H2C2 271 aa10.92□□□□□ -0.66
TNFRSF1A-216ENST00000543995 U3KQE9 123 aa10.92□□□□□ -0.66
TNFRSF1A-216ENST00000543995 TRAV25A0A0B4J276 109 aa10.91□□□□□ -0.66
TNFRSF1A-216ENST00000543995 A0A0D9SG52 128 aa10.91□□□□□ -0.66
TNFRSF1A-216ENST00000543995 TAAR5O14804 337 aa10.91□□□□□ -0.66
TNFRSF1A-216ENST00000543995 CD5P06127 495 aa10.91□□□□□ -0.66
TNFRSF1A-216ENST00000543995 GP9P14770 177 aa10.91□□□□□ -0.66
TNFRSF1A-216ENST00000543995 KPRPQ5T749 579 aaPredicted RBP10.91□□□□□ -0.66
TNFRSF1A-216ENST00000543995 C10orf113Q5VZT2 155 aa10.91□□□□□ -0.66
TNFRSF1A-216ENST00000543995 C16orf54Q6UWD8 224 aa10.91□□□□□ -0.66
TNFRSF1A-216ENST00000543995 HSD17B11Q8NBQ5 300 aa10.91□□□□□ -0.66
TNFRSF1A-216ENST00000543995 UHRF2Q96PU4 802 aa10.91□□□□□ -0.66
TNFRSF1A-216ENST00000543995 PFDN5Q99471 154 aa10.91□□□□□ -0.66
TNFRSF1A-216ENST00000543995 SLC25A39Q9BZJ4 359 aaPredicted RBP10.91□□□□□ -0.66
TNFRSF1A-216ENST00000543995 SLC25A22Q9H936 323 aa10.91□□□□□ -0.66
TNFRSF1A-216ENST00000543995 ELOA3CA0A087WX78 387 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF1A-216ENST00000543995 KCNRGQ8N5I3 272 aa10.9□□□□□ -0.66
TNFRSF1A-216ENST00000543995 OR1L4Q8NGR5 311 aa10.9□□□□□ -0.66
TNFRSF1A-216ENST00000543995 HYLS1Q96M11 299 aa10.9□□□□□ -0.66
TNFRSF1A-216ENST00000543995 ARPC5LQ9BPX5 153 aa10.9□□□□□ -0.66
TNFRSF1A-216ENST00000543995 DNAJC4Q9NNZ3 241 aa10.9□□□□□ -0.66
TNFRSF1A-216ENST00000543995 KANTRA0A1W2PQU2 76 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 HELTA6NFD8 242 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 ZNF98A6NK75 572 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 H3BRN7 92 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 TSPAN4O14817 238 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 CXCL2P19875 107 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 PAFAH1B2P68402 229 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 ZFP69Q49AA0 526 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 C1orf194Q5T5A4 169 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 FAM90A2PQ658T7 463 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 RPL7L1Q6DKI1 246 aaKnown RBP10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 PATE2Q6UY27 113 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 SIGLEC15Q6ZMC9 328 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 LINC00305Q7Z4B0 112 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 OR8I2Q8N0Y5 310 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 GBGT1Q8N5D6 347 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 GLMPQ8WWB7 406 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 PRR25Q96S07 402 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 SCRT1Q9BWW7 348 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 ZNF785A8K8V0 405 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 DNASE2O00115 360 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 JTBO76095 146 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 PRB2P02812 416 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 TFPI2P48307 235 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 FFAR4Q5NUL3 377 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 LEMD1Q68G75 181 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 GTSCR1Q86UQ5 136 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 STXBP6Q8NFX7 210 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 TMEM37Q8WXS4 190 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 SPAG8Q99932 426 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 SHANK2-AS3Q9BTD1 123 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 TIMM9Q9Y5J7 89 aa10.89□□□□□ -0.67
TNFRSF1A-216ENST00000543995 ATP6V0CP27449 155 aa10.88□□□□□ -0.67
TNFRSF1A-216ENST00000543995 WFDC3Q8IUB2 231 aa10.88□□□□□ -0.67
TNFRSF1A-216ENST00000543995 GATAD1Q8WUU5 269 aa10.88□□□□□ -0.67
TNFRSF1A-216ENST00000543995 RNF24Q9Y225 148 aa10.88□□□□□ -0.67
TNFRSF1A-216ENST00000543995 RFNGQ9Y644 331 aa10.88□□□□□ -0.67
TNFRSF1A-216ENST00000543995 SORL1Q92673 2214 aa10.88□□□□□ -0.67
TNFRSF1A-216ENST00000543995 OR4C46A6NHA9 309 aa10.87□□□□□ -0.67
TNFRSF1A-216ENST00000543995 GCSAMLQ5JQS6 135 aa10.87□□□□□ -0.67
TNFRSF1A-216ENST00000543995 TMUB2Q71RG4 321 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms