RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 C16orf54Q6UWD8 224 aa11.65□□□□□ -0.54
DDB1-218ENST00000540784 GTSCR1Q86UQ5 136 aa11.65□□□□□ -0.54
DDB1-218ENST00000540784 AQP10Q96PS8 301 aa11.65□□□□□ -0.54
DDB1-218ENST00000540784 ATP5SQ99766 215 aa11.65□□□□□ -0.54
DDB1-218ENST00000540784 SPAG8Q99932 426 aaPredicted RBP11.65□□□□□ -0.54
DDB1-218ENST00000540784 ARL6Q9H0F7 186 aa11.65□□□□□ -0.54
DDB1-218ENST00000540784 IGKV3-7A0A075B6H7 116 aa11.64□□□□□ -0.55
DDB1-218ENST00000540784 HELTA6NFD8 242 aa11.64□□□□□ -0.55
DDB1-218ENST00000540784 K7EIL1 84 aa11.64□□□□□ -0.55
DDB1-218ENST00000540784 IFNA5P01569 189 aa11.64□□□□□ -0.55
DDB1-218ENST00000540784 OR5G3P0C626 314 aa11.64□□□□□ -0.55
DDB1-218ENST00000540784 AP2S1P53680 142 aaPredicted RBP11.64□□□□□ -0.55
DDB1-218ENST00000540784 PLP1P60201 277 aa11.64□□□□□ -0.55
DDB1-218ENST00000540784 Q6ZRG5 221 aa11.64□□□□□ -0.55
DDB1-218ENST00000540784 S100A7AQ86SG5 101 aa11.64□□□□□ -0.55
DDB1-218ENST00000540784 ZNF709Q8N972 641 aa11.64□□□□□ -0.55
DDB1-218ENST00000540784 SCGB1C1Q8TD33 95 aa11.64□□□□□ -0.55
DDB1-218ENST00000540784 NEURL2Q9BR09 285 aa11.64□□□□□ -0.55
DDB1-218ENST00000540784 DOK5Q9P104 306 aa11.64□□□□□ -0.55
DDB1-218ENST00000540784 SMLR1H3BR10 107 aa11.63□□□□□ -0.55
DDB1-218ENST00000540784 DNASE2O00115 360 aaPredicted RBP11.63□□□□□ -0.55
DDB1-218ENST00000540784 RPL29P47914 159 aaKnown RBP11.63□□□□□ -0.55
DDB1-218ENST00000540784 C1orf194Q5T5A4 169 aa11.63□□□□□ -0.55
DDB1-218ENST00000540784 MIC13Q5XKP0 118 aa11.63□□□□□ -0.55
DDB1-218ENST00000540784 Q8N1Y9 231 aa11.63□□□□□ -0.55
DDB1-218ENST00000540784 GBGT1Q8N5D6 347 aa11.63□□□□□ -0.55
DDB1-218ENST00000540784 STPG3Q8N7X2 389 aa11.63□□□□□ -0.55
DDB1-218ENST00000540784 MRAPQ8TCY5 172 aa11.63□□□□□ -0.55
DDB1-218ENST00000540784 GGTLC1Q9BX51 225 aa11.63□□□□□ -0.55
DDB1-218ENST00000540784 WDR61Q9GZS3 305 aaKnown RBP11.63□□□□□ -0.55
DDB1-218ENST00000540784 TNFSF18Q9UNG2 199 aa11.63□□□□□ -0.55
DDB1-218ENST00000540784 HIGD1AQ9Y241 93 aa11.63□□□□□ -0.55
DDB1-218ENST00000540784 hCG_2014768A0A024R1R8 64 aa11.62□□□□□ -0.55
DDB1-218ENST00000540784 OR4C46A6NHA9 309 aa11.62□□□□□ -0.55
DDB1-218ENST00000540784 G3V3Q6 166 aa11.62□□□□□ -0.55
DDB1-218ENST00000540784 TFPI2P48307 235 aa11.62□□□□□ -0.55
DDB1-218ENST00000540784 CD81P60033 236 aa11.62□□□□□ -0.55
DDB1-218ENST00000540784 PRR20EP86478 221 aa11.62□□□□□ -0.55
DDB1-218ENST00000540784 PRR20CP86479 221 aa11.62□□□□□ -0.55
DDB1-218ENST00000540784 PRR20DP86480 221 aa11.62□□□□□ -0.55
DDB1-218ENST00000540784 PRR20BP86481 221 aa11.62□□□□□ -0.55
DDB1-218ENST00000540784 PRR20AP86496 221 aa11.62□□□□□ -0.55
DDB1-218ENST00000540784 OPCMLQ14982 345 aa11.62□□□□□ -0.55
DDB1-218ENST00000540784 WFDC3Q8IUB2 231 aa11.62□□□□□ -0.55
DDB1-218ENST00000540784 OR8I2Q8N0Y5 310 aa11.62□□□□□ -0.55
DDB1-218ENST00000540784 GLMPQ8WWB7 406 aa11.62□□□□□ -0.55
DDB1-218ENST00000540784 NPCDR1Q9BY65 106 aa11.62□□□□□ -0.55
DDB1-218ENST00000540784 MS4A6AQ9H2W1 248 aa11.62□□□□□ -0.55
DDB1-218ENST00000540784 WFDC1Q9HC57 220 aa11.62□□□□□ -0.55
DDB1-218ENST00000540784 DNAJC4Q9NNZ3 241 aa11.62□□□□□ -0.55
DDB1-218ENST00000540784 FBXL17Q9UF56 701 aa11.62□□□□□ -0.55
DDB1-218ENST00000540784 ELOA3CA0A087WX78 387 aaPredicted RBP11.61□□□□□ -0.55
DDB1-218ENST00000540784 ZNF98A6NK75 572 aa11.61□□□□□ -0.55
DDB1-218ENST00000540784 C17orf112F2Z3M2 114 aa11.61□□□□□ -0.55
DDB1-218ENST00000540784 COX7A2P2O60397 106 aa11.61□□□□□ -0.55
DDB1-218ENST00000540784 CD7P09564 240 aa11.61□□□□□ -0.55
DDB1-218ENST00000540784 CMC4P56277 68 aaPredicted RBP11.61□□□□□ -0.55
DDB1-218ENST00000540784 PATE2Q6UY27 113 aa11.61□□□□□ -0.55
DDB1-218ENST00000540784 SIGLEC15Q6ZMC9 328 aa11.61□□□□□ -0.55
DDB1-218ENST00000540784 OR1L4Q8NGR5 311 aa11.61□□□□□ -0.55
DDB1-218ENST00000540784 SLC25A39Q9BZJ4 359 aaPredicted RBP11.61□□□□□ -0.55
DDB1-218ENST00000540784 ARV1Q9H2C2 271 aa11.61□□□□□ -0.55
DDB1-218ENST00000540784 SLC39A9Q9NUM3 307 aa11.61□□□□□ -0.55
DDB1-218ENST00000540784 RNF24Q9Y225 148 aa11.61□□□□□ -0.55
DDB1-218ENST00000540784 PXMP4Q9Y6I8 212 aa11.61□□□□□ -0.55
DDB1-218ENST00000540784 SMAD5-AS1Q9Y6J3 95 aa11.61□□□□□ -0.55
DDB1-218ENST00000540784 B2MP61769 119 aa11.6□□□□□ -0.55
DDB1-218ENST00000540784 C10orf113Q5VZT2 155 aa11.6□□□□□ -0.55
DDB1-218ENST00000540784 STXBP6Q8NFX7 210 aa11.6□□□□□ -0.55
DDB1-218ENST00000540784 SHANK2-AS3Q9BTD1 123 aa11.6□□□□□ -0.55
DDB1-218ENST00000540784 SLC25A22Q9H936 323 aa11.6□□□□□ -0.55
DDB1-218ENST00000540784 KCNIP2Q9NS61 270 aa11.6□□□□□ -0.55
DDB1-218ENST00000540784 SORL1Q92673 2214 aa11.6□□□□□ -0.55
DDB1-218ENST00000540784 MEGF8Q7Z7M0 2845 aa11.59□□□□□ -0.55
DDB1-218ENST00000540784 TRAV2A0A0B4J234 112 aa11.59□□□□□ -0.55
DDB1-218ENST00000540784 RNF222A6NCQ9 220 aa11.59□□□□□ -0.55
DDB1-218ENST00000540784 OR11H12B2RN74 326 aa11.59□□□□□ -0.55
DDB1-218ENST00000540784 ARPC5O15511 151 aa11.59□□□□□ -0.55
DDB1-218ENST00000540784 ZNF266Q14584 549 aa11.59□□□□□ -0.55
DDB1-218ENST00000540784 LINC00305Q7Z4B0 112 aa11.59□□□□□ -0.55
DDB1-218ENST00000540784 TMEM37Q8WXS4 190 aa11.59□□□□□ -0.55
DDB1-218ENST00000540784 ST6GAL2Q96JF0 529 aa11.59□□□□□ -0.55
DDB1-218ENST00000540784 UHRF2Q96PU4 802 aa11.59□□□□□ -0.55
DDB1-218ENST00000540784 PFDN5Q99471 154 aa11.59□□□□□ -0.55
DDB1-218ENST00000540784 PARD6GQ9BYG4 376 aaPredicted RBP11.59□□□□□ -0.55
DDB1-218ENST00000540784 MFFQ9GZY8 342 aa11.59□□□□□ -0.55
DDB1-218ENST00000540784 DNAH3Q8TD57 4116 aa11.58□□□□□ -0.55
DDB1-218ENST00000540784 HMSDA8MTL9 139 aa11.58□□□□□ -0.56
DDB1-218ENST00000540784 H3BRN7 92 aa11.58□□□□□ -0.56
DDB1-218ENST00000540784 GALR1P47211 349 aa11.58□□□□□ -0.56
DDB1-218ENST00000540784 LEMD1Q68G75 181 aa11.58□□□□□ -0.56
DDB1-218ENST00000540784 GPR82Q96P67 336 aa11.58□□□□□ -0.56
DDB1-218ENST00000540784 SCRT1Q9BWW7 348 aa11.58□□□□□ -0.56
DDB1-218ENST00000540784 TUBA4BQ9H853 241 aa11.58□□□□□ -0.56
DDB1-218ENST00000540784 DEFB125Q8N687 156 aa11.57□□□□□ -0.56
DDB1-218ENST00000540784 OR11H4Q8NGC9 324 aa11.57□□□□□ -0.56
DDB1-218ENST00000540784 GATAD1Q8WUU5 269 aa11.57□□□□□ -0.56
DDB1-218ENST00000540784 RSG1Q9BU20 258 aa11.57□□□□□ -0.56
DDB1-218ENST00000540784 SLC25A32Q9H2D1 315 aa11.57□□□□□ -0.56
DDB1-218ENST00000540784 NRN1Q9NPD7 142 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms