RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 CYP2G1PQ6ZSU1 146 aa9.45□□□□□ -0.9
CLSTN3-208ENST00000538933 SLC51BQ86UW2 128 aa9.45□□□□□ -0.9
CLSTN3-208ENST00000538933 BPIFCQ8NFQ6 507 aa9.45□□□□□ -0.9
CLSTN3-208ENST00000538933 Q8WTZ3 238 aa9.45□□□□□ -0.9
CLSTN3-208ENST00000538933 GATAD1Q8WUU5 269 aa9.45□□□□□ -0.9
CLSTN3-208ENST00000538933 NPCDR1Q9BY65 106 aa9.45□□□□□ -0.9
CLSTN3-208ENST00000538933 PARD6GQ9BYG4 376 aaPredicted RBP9.45□□□□□ -0.9
CLSTN3-208ENST00000538933 MUC4Q99102 2169 aa9.45□□□□□ -0.9
CLSTN3-208ENST00000538933 IGHV3-35A0A0C4DH35 117 aa9.44□□□□□ -0.9
CLSTN3-208ENST00000538933 LINC01619G3V211 115 aa9.44□□□□□ -0.9
CLSTN3-208ENST00000538933 TRBV12-3P01733 135 aa9.44□□□□□ -0.9
CLSTN3-208ENST00000538933 RD3LP0DJH9 198 aa9.44□□□□□ -0.9
CLSTN3-208ENST00000538933 ZP3P21754 424 aa9.44□□□□□ -0.9
CLSTN3-208ENST00000538933 FAM106AQ4KMX7 169 aa9.44□□□□□ -0.9
CLSTN3-208ENST00000538933 LAMTOR1Q6IAA8 161 aa9.44□□□□□ -0.9
CLSTN3-208ENST00000538933 Q6ZRG5 221 aa9.44□□□□□ -0.9
CLSTN3-208ENST00000538933 GNPNAT1Q96EK6 184 aaPredicted RBP9.44□□□□□ -0.9
CLSTN3-208ENST00000538933 MGST2Q99735 147 aa9.44□□□□□ -0.9
CLSTN3-208ENST00000538933 BOLA1Q9Y3E2 137 aa9.44□□□□□ -0.9
CLSTN3-208ENST00000538933 IGHV4OR15-8A0A075B7B6 117 aa9.43□□□□□ -0.9
CLSTN3-208ENST00000538933 A0A087WW49 117 aa9.43□□□□□ -0.9
CLSTN3-208ENST00000538933 F8W735 103 aaPredicted RBP9.43□□□□□ -0.9
CLSTN3-208ENST00000538933 OR2C1O95371 312 aa9.43□□□□□ -0.9
CLSTN3-208ENST00000538933 LY6G6CO95867 125 aa9.43□□□□□ -0.9
CLSTN3-208ENST00000538933 TOMM40O96008 361 aa9.43□□□□□ -0.9
CLSTN3-208ENST00000538933 CFDP00746 253 aaPredicted RBP9.43□□□□□ -0.9
CLSTN3-208ENST00000538933 CTSGP08311 255 aa9.43□□□□□ -0.9
CLSTN3-208ENST00000538933 ATP6V0CP27449 155 aa9.43□□□□□ -0.9
CLSTN3-208ENST00000538933 YPEL3P61236 119 aaPredicted RBP9.43□□□□□ -0.9
CLSTN3-208ENST00000538933 LYZP61626 148 aa9.43□□□□□ -0.9
CLSTN3-208ENST00000538933 B2MP61769 119 aa9.43□□□□□ -0.9
CLSTN3-208ENST00000538933 ZNF90Q03938 601 aa9.43□□□□□ -0.9
CLSTN3-208ENST00000538933 EIF5AL1Q6IS14 154 aaKnown RBP9.43□□□□□ -0.9
CLSTN3-208ENST00000538933 OR51G1Q8NGK1 321 aa9.43□□□□□ -0.9
CLSTN3-208ENST00000538933 RSG1Q9BU20 258 aa9.43□□□□□ -0.9
CLSTN3-208ENST00000538933 CHRDL1Q9BU40 450 aa9.43□□□□□ -0.9
CLSTN3-208ENST00000538933 C20orf24Q9BUV8 137 aa9.43□□□□□ -0.9
CLSTN3-208ENST00000538933 PBDC1Q9BVG4 233 aa9.43□□□□□ -0.9
CLSTN3-208ENST00000538933 GGTLC1Q9BX51 225 aa9.43□□□□□ -0.9
CLSTN3-208ENST00000538933 CYTL1Q9NRR1 136 aa9.43□□□□□ -0.9
CLSTN3-208ENST00000538933 IGKV1D-37A0A075B6S9 117 aa9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 IGKV1OR2-108A0A075B7D4 117 aa9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 ZNF320A2RRD8 509 aa9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 BMPR1BO00238 502 aa9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 IGKV1-17P01599 117 aa9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 IL4P05112 153 aa9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 LINC00869P0C866 280 aa9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 PSG1P11464 419 aa9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 GATA2P23769 480 aaPredicted RBP9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 S100A7P31151 101 aa9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 ELLP55199 621 aaPredicted RBP9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 FFAR4Q5NUL3 377 aa9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 MIC13Q5XKP0 118 aa9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 BAP18Q8IXM2 172 aa9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 RPP25LQ8N5L8 163 aaKnown RBP9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 STPG3Q8N7X2 389 aa9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 OR1B1Q8NGR6 318 aa9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 OR2G3Q8NGZ4 309 aa9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 ST8SIA2Q92186 375 aa9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 GINS3Q9BRX5 216 aa9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 SLC25A32Q9H2D1 315 aa9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 RETNQ9HD89 108 aa9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 TIMM9Q9Y5J7 89 aa9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 PUS1Q9Y606 427 aaKnown RBP eCLIP9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 PXMP4Q9Y6I8 212 aa9.42□□□□□ -0.9
CLSTN3-208ENST00000538933 FAT2Q9NYQ8 4349 aa9.41□□□□□ -0.9
CLSTN3-208ENST00000538933 DNAH6Q9C0G6 4158 aa9.41□□□□□ -0.9
CLSTN3-208ENST00000538933 DNAH17Q9UFH2 4485 aa9.41□□□□□ -0.9
CLSTN3-208ENST00000538933 NDUFA4O00483 81 aa9.41□□□□□ -0.9
CLSTN3-208ENST00000538933 COX7A2P2O60397 106 aa9.41□□□□□ -0.9
CLSTN3-208ENST00000538933 OR5G3P0C626 314 aa9.41□□□□□ -0.9
CLSTN3-208ENST00000538933 ORM2P19652 201 aa9.41□□□□□ -0.9
CLSTN3-208ENST00000538933 ADMP35318 185 aa9.41□□□□□ -0.9
CLSTN3-208ENST00000538933 RPL29P47914 159 aaKnown RBP9.41□□□□□ -0.9
CLSTN3-208ENST00000538933 SLURP1P55000 103 aa9.41□□□□□ -0.9
CLSTN3-208ENST00000538933 AKR1C8PQ5T2L2 129 aa9.41□□□□□ -0.9
CLSTN3-208ENST00000538933 S100A7AQ86SG5 101 aa9.41□□□□□ -0.9
CLSTN3-208ENST00000538933 STOML3Q8TAV4 291 aa9.41□□□□□ -0.9
CLSTN3-208ENST00000538933 NARS2Q96I59 477 aaKnown RBP9.41□□□□□ -0.9
CLSTN3-208ENST00000538933 PSMG3Q9BT73 122 aaPredicted RBP9.41□□□□□ -0.9
CLSTN3-208ENST00000538933 SLC39A9Q9NUM3 307 aa9.41□□□□□ -0.9
CLSTN3-208ENST00000538933 SLC45A2Q9UMX9 530 aa9.41□□□□□ -0.9
CLSTN3-208ENST00000538933 SERF2P84101 59 aa9.4□□□□□ -0.9
CLSTN3-208ENST00000538933 ACOT6Q3I5F7 207 aaPredicted RBP9.4□□□□□ -0.9
CLSTN3-208ENST00000538933 PXDC1Q5TGL8 231 aa9.4□□□□□ -0.9
CLSTN3-208ENST00000538933 LINC00322Q6ZN03 302 aaPredicted RBP9.4□□□□□ -0.9
CLSTN3-208ENST00000538933 TMEM182Q6ZP80 229 aaPredicted RBP9.4□□□□□ -0.9
CLSTN3-208ENST00000538933 OR1L4Q8NGR5 311 aa9.4□□□□□ -0.9
CLSTN3-208ENST00000538933 RNF125Q96EQ8 232 aa9.4□□□□□ -0.9
CLSTN3-208ENST00000538933 METTL26Q96S19 204 aa9.4□□□□□ -0.9
CLSTN3-208ENST00000538933 PFDN5Q99471 154 aa9.4□□□□□ -0.9
CLSTN3-208ENST00000538933 SH3BGRL3Q9H299 93 aa9.4□□□□□ -0.9
CLSTN3-208ENST00000538933 DOK5Q9P104 306 aa9.4□□□□□ -0.9
CLSTN3-208ENST00000538933 PFDN2Q9UHV9 154 aa9.4□□□□□ -0.9
CLSTN3-208ENST00000538933 RABAC1Q9UI14 185 aa9.4□□□□□ -0.9
CLSTN3-208ENST00000538933 DYNC1H1Q14204 4646 aaKnown RBP9.4□□□□□ -0.91
CLSTN3-208ENST00000538933 DNAH2Q9P225 4427 aa9.39□□□□□ -0.91
CLSTN3-208ENST00000538933 IGHV3OR16-8A0A075B7F1 116 aa9.39□□□□□ -0.91
CLSTN3-208ENST00000538933 HYPMO75409 117 aa9.39□□□□□ -0.91
CLSTN3-208ENST00000538933 IGLV1-51P01701 117 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms