RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 ZNF90Q03938 601 aa13.3□□□□□ -0.28
TNFRSF1A-209ENST00000536717 RAB31Q13636 194 aa13.3□□□□□ -0.28
TNFRSF1A-209ENST00000536717 LAMTOR1Q6IAA8 161 aa13.3□□□□□ -0.28
TNFRSF1A-209ENST00000536717 TOMM20LQ6UXN7 152 aa13.3□□□□□ -0.28
TNFRSF1A-209ENST00000536717 TCTE3Q8IZS6 198 aa13.3□□□□□ -0.28
TNFRSF1A-209ENST00000536717 RNF2Q99496 336 aa13.3□□□□□ -0.28
TNFRSF1A-209ENST00000536717 GINS3Q9BRX5 216 aa13.3□□□□□ -0.28
TNFRSF1A-209ENST00000536717 RHPN1-AS1Q9BWJ2 59 aa13.3□□□□□ -0.28
TNFRSF1A-209ENST00000536717 ZFAND3Q9H8U3 227 aa13.3□□□□□ -0.28
TNFRSF1A-209ENST00000536717 TNFSF18Q9UNG2 199 aa13.3□□□□□ -0.28
TNFRSF1A-209ENST00000536717 SACSQ9NZJ4 4579 aa13.3□□□□□ -0.28
TNFRSF1A-209ENST00000536717 IGHV3-49A0A0A0MS15 119 aa13.29□□□□□ -0.28
TNFRSF1A-209ENST00000536717 DFFBO76075 338 aa13.29□□□□□ -0.28
TNFRSF1A-209ENST00000536717 PSG1P11464 419 aa13.29□□□□□ -0.28
TNFRSF1A-209ENST00000536717 OR51G1Q8NGK1 321 aa13.29□□□□□ -0.28
TNFRSF1A-209ENST00000536717 SMIM3Q9BZL3 60 aa13.29□□□□□ -0.28
TNFRSF1A-209ENST00000536717 IGHV3OR16-13A0A075B7E8 117 aa13.29□□□□□ -0.28
TNFRSF1A-209ENST00000536717 IGHV3-74A0A0B4J1X5 117 aa13.29□□□□□ -0.28
TNFRSF1A-209ENST00000536717 ARPC5O15511 151 aa13.29□□□□□ -0.28
TNFRSF1A-209ENST00000536717 CFDP00746 253 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF1A-209ENST00000536717 ODF3L2Q3SX64 289 aa13.29□□□□□ -0.28
TNFRSF1A-209ENST00000536717 CASC10Q5T4H9 136 aa13.29□□□□□ -0.28
TNFRSF1A-209ENST00000536717 CYP2G1PQ6ZSU1 146 aa13.29□□□□□ -0.28
TNFRSF1A-209ENST00000536717 ATP5SQ99766 215 aa13.29□□□□□ -0.28
TNFRSF1A-209ENST00000536717 FAM110AQ9BQ89 295 aa13.29□□□□□ -0.28
TNFRSF1A-209ENST00000536717 UBQLN2Q9UHD9 624 aa13.29□□□□□ -0.28
TNFRSF1A-209ENST00000536717 WDR83OSQ9Y284 106 aa13.29□□□□□ -0.28
TNFRSF1A-209ENST00000536717 MPDU1O75352 247 aa13.28□□□□□ -0.28
TNFRSF1A-209ENST00000536717 IL4P05112 153 aa13.28□□□□□ -0.28
TNFRSF1A-209ENST00000536717 HNRNPCP07910 306 aaKnown RBP eCLIP13.28□□□□□ -0.28
TNFRSF1A-209ENST00000536717 AP2S1P53680 142 aaPredicted RBP13.28□□□□□ -0.28
TNFRSF1A-209ENST00000536717 SELENOTP62341 195 aa13.28□□□□□ -0.28
TNFRSF1A-209ENST00000536717 OR2F1Q13607 317 aa13.28□□□□□ -0.28
TNFRSF1A-209ENST00000536717 FAM90A2PQ658T7 463 aa13.28□□□□□ -0.28
TNFRSF1A-209ENST00000536717 BPIFCQ8NFQ6 507 aa13.28□□□□□ -0.28
TNFRSF1A-209ENST00000536717 RNF222A6NCQ9 220 aa13.27□□□□□ -0.29
TNFRSF1A-209ENST00000536717 HMSDA8MTL9 139 aa13.27□□□□□ -0.29
TNFRSF1A-209ENST00000536717 AGPAT2O15120 278 aa13.27□□□□□ -0.29
TNFRSF1A-209ENST00000536717 FGF7P21781 194 aa13.27□□□□□ -0.29
TNFRSF1A-209ENST00000536717 RNF125Q96EQ8 232 aa13.27□□□□□ -0.29
TNFRSF1A-209ENST00000536717 GGTLC1Q9BX51 225 aa13.27□□□□□ -0.29
TNFRSF1A-209ENST00000536717 MFFQ9GZY8 342 aa13.27□□□□□ -0.29
TNFRSF1A-209ENST00000536717 VSIRQ9H7M9 311 aa13.27□□□□□ -0.29
TNFRSF1A-209ENST00000536717 FBXL17Q9UF56 701 aa13.27□□□□□ -0.29
TNFRSF1A-209ENST00000536717 LOC102724200A0A096LPH7 203 aaPredicted RBP13.26□□□□□ -0.29
TNFRSF1A-209ENST00000536717 OR4C46A6NHA9 309 aa13.26□□□□□ -0.29
TNFRSF1A-209ENST00000536717 IFNA5P01569 189 aa13.26□□□□□ -0.29
TNFRSF1A-209ENST00000536717 APOHP02749 345 aaPredicted RBP13.26□□□□□ -0.29
TNFRSF1A-209ENST00000536717 CAMLGP49069 296 aa13.26□□□□□ -0.29
TNFRSF1A-209ENST00000536717 OR11H4Q8NGC9 324 aa13.26□□□□□ -0.29
TNFRSF1A-209ENST00000536717 ST8SIA2Q92186 375 aa13.26□□□□□ -0.29
TNFRSF1A-209ENST00000536717 METTL26Q96S19 204 aa13.26□□□□□ -0.29
TNFRSF1A-209ENST00000536717 MGST2Q99735 147 aa13.26□□□□□ -0.29
TNFRSF1A-209ENST00000536717 AGRNO00468 2067 aa13.26□□□□□ -0.29
TNFRSF1A-209ENST00000536717 LYSTQ99698 3801 aa13.26□□□□□ -0.29
TNFRSF1A-209ENST00000536717 NPPCP23582 126 aa13.25□□□□□ -0.29
TNFRSF1A-209ENST00000536717 GATA2P23769 480 aaPredicted RBP13.25□□□□□ -0.29
TNFRSF1A-209ENST00000536717 LYZP61626 148 aa13.25□□□□□ -0.29
TNFRSF1A-209ENST00000536717 ZNF266Q14584 549 aa13.25□□□□□ -0.29
TNFRSF1A-209ENST00000536717 SCGB1C1Q8TD33 95 aa13.25□□□□□ -0.29
TNFRSF1A-209ENST00000536717 PBDC1Q9BVG4 233 aa13.25□□□□□ -0.29
TNFRSF1A-209ENST00000536717 C1QBP02746 253 aa13.24□□□□□ -0.29
TNFRSF1A-209ENST00000536717 BMI1P35226 326 aa13.24□□□□□ -0.29
TNFRSF1A-209ENST00000536717 ZNF345Q14585 488 aa13.24□□□□□ -0.29
TNFRSF1A-209ENST00000536717 TMEM182Q6ZP80 229 aaPredicted RBP13.24□□□□□ -0.29
TNFRSF1A-209ENST00000536717 NARS2Q96I59 477 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1A-209ENST00000536717 NPCDR1Q9BY65 106 aa13.24□□□□□ -0.29
TNFRSF1A-209ENST00000536717 WDR61Q9GZS3 305 aaKnown RBP13.24□□□□□ -0.29
TNFRSF1A-209ENST00000536717 RABAC1Q9UI14 185 aa13.24□□□□□ -0.29
TNFRSF1A-209ENST00000536717 TENM2Q9NT68 2774 aa13.24□□□□□ -0.29
TNFRSF1A-209ENST00000536717 IGKV3-7A0A075B6H7 116 aa13.23□□□□□ -0.29
TNFRSF1A-209ENST00000536717 LINC00869P0C866 280 aa13.23□□□□□ -0.29
TNFRSF1A-209ENST00000536717 USF2Q15853 346 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF1A-209ENST00000536717 TCF24Q7RTU0 167 aa13.23□□□□□ -0.29
TNFRSF1A-209ENST00000536717 ZNF709Q8N972 641 aa13.23□□□□□ -0.29
TNFRSF1A-209ENST00000536717 PFDN2Q9UHV9 154 aa13.23□□□□□ -0.29
TNFRSF1A-209ENST00000536717 SLC45A2Q9UMX9 530 aa13.23□□□□□ -0.29
TNFRSF1A-209ENST00000536717 IGHV3-66A0A0C4DH42 116 aa13.23□□□□□ -0.29
TNFRSF1A-209ENST00000536717 A0A1W2PS18 150 aa13.23□□□□□ -0.29
TNFRSF1A-209ENST00000536717 TFPI2P48307 235 aa13.23□□□□□ -0.29
TNFRSF1A-209ENST00000536717 OPCMLQ14982 345 aa13.23□□□□□ -0.29
TNFRSF1A-209ENST00000536717 HYLS1Q96M11 299 aa13.23□□□□□ -0.29
TNFRSF1A-209ENST00000536717 WFDC1Q9HC57 220 aa13.23□□□□□ -0.29
TNFRSF1A-209ENST00000536717 KCNIP2Q9NS61 270 aa13.23□□□□□ -0.29
TNFRSF1A-209ENST00000536717 A0A0D9SG52 128 aa13.22□□□□□ -0.29
TNFRSF1A-209ENST00000536717 C17orf112F2Z3M2 114 aa13.22□□□□□ -0.29
TNFRSF1A-209ENST00000536717 TAAR5O14804 337 aa13.22□□□□□ -0.29
TNFRSF1A-209ENST00000536717 ORM2P19652 201 aa13.22□□□□□ -0.29
TNFRSF1A-209ENST00000536717 CRYBB3P26998 211 aa13.22□□□□□ -0.29
TNFRSF1A-209ENST00000536717 S100A7P31151 101 aa13.22□□□□□ -0.29
TNFRSF1A-209ENST00000536717 RPL29P47914 159 aaKnown RBP13.22□□□□□ -0.29
TNFRSF1A-209ENST00000536717 CD300CQ08708 224 aa13.22□□□□□ -0.29
TNFRSF1A-209ENST00000536717 PXDC1Q5TGL8 231 aa13.22□□□□□ -0.29
TNFRSF1A-209ENST00000536717 ZFAND6Q6FIF0 208 aa13.22□□□□□ -0.29
TNFRSF1A-209ENST00000536717 Q6ZRG5 221 aa13.22□□□□□ -0.29
TNFRSF1A-209ENST00000536717 GBGT1Q8N5D6 347 aa13.22□□□□□ -0.29
TNFRSF1A-209ENST00000536717 STPG3Q8N7X2 389 aa13.22□□□□□ -0.29
TNFRSF1A-209ENST00000536717 OR1B1Q8NGR6 318 aa13.22□□□□□ -0.29
TNFRSF1A-209ENST00000536717 OVOL2Q9BRP0 275 aa13.22□□□□□ -0.29
TNFRSF1A-209ENST00000536717 PARD6GQ9BYG4 376 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms