RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 DOK5Q9P104 306 aa8.41□□□□□ -1.06
TNFRSF1A-208ENST00000536194 MBD2Q9UBB5 411 aa8.41□□□□□ -1.06
TNFRSF1A-208ENST00000536194 SLC45A2Q9UMX9 530 aa8.41□□□□□ -1.06
TNFRSF1A-208ENST00000536194 WDR83OSQ9Y284 106 aa8.41□□□□□ -1.06
TNFRSF1A-208ENST00000536194 TRAV2A0A0B4J234 112 aa8.4□□□□□ -1.06
TNFRSF1A-208ENST00000536194 UBE2L5PA0A1B0GUS4 154 aa8.4□□□□□ -1.06
TNFRSF1A-208ENST00000536194 K7EQG2 157 aa8.4□□□□□ -1.06
TNFRSF1A-208ENST00000536194 CFDP00746 253 aaPredicted RBP8.4□□□□□ -1.06
TNFRSF1A-208ENST00000536194 LYL1P12980 280 aa8.4□□□□□ -1.06
TNFRSF1A-208ENST00000536194 ORM2P19652 201 aa8.4□□□□□ -1.06
TNFRSF1A-208ENST00000536194 HBG1P69891 147 aa8.4□□□□□ -1.06
TNFRSF1A-208ENST00000536194 HBG2P69892 147 aa8.4□□□□□ -1.06
TNFRSF1A-208ENST00000536194 Q5BKY6 102 aa8.4□□□□□ -1.06
TNFRSF1A-208ENST00000536194 SIGLEC15Q6ZMC9 328 aa8.4□□□□□ -1.06
TNFRSF1A-208ENST00000536194 STXBP6Q8NFX7 210 aa8.4□□□□□ -1.06
TNFRSF1A-208ENST00000536194 OR1B1Q8NGR6 318 aa8.4□□□□□ -1.06
TNFRSF1A-208ENST00000536194 GRAMD2BQ96HH9 432 aa8.4□□□□□ -1.06
TNFRSF1A-208ENST00000536194 FAM110AQ9BQ89 295 aa8.4□□□□□ -1.06
TNFRSF1A-208ENST00000536194 GGTLC1Q9BX51 225 aa8.4□□□□□ -1.06
TNFRSF1A-208ENST00000536194 SLC25A31Q9H0C2 315 aa8.4□□□□□ -1.06
TNFRSF1A-208ENST00000536194 TUBA4BQ9H853 241 aa8.4□□□□□ -1.06
TNFRSF1A-208ENST00000536194 MAP6D1Q9H9H5 199 aa8.4□□□□□ -1.06
TNFRSF1A-208ENST00000536194 UQCC1Q9NVA1 299 aa8.4□□□□□ -1.06
TNFRSF1A-208ENST00000536194 COL7A1Q02388 2944 aa8.39□□□□□ -1.07
TNFRSF1A-208ENST00000536194 H3BRN7 92 aa8.39□□□□□ -1.07
TNFRSF1A-208ENST00000536194 DNASE2O00115 360 aaPredicted RBP8.39□□□□□ -1.07
TNFRSF1A-208ENST00000536194 PET100P0DJ07 73 aa8.39□□□□□ -1.07
TNFRSF1A-208ENST00000536194 SELENOTP62341 195 aa8.39□□□□□ -1.07
TNFRSF1A-208ENST00000536194 PATE2Q6UY27 113 aa8.39□□□□□ -1.07
TNFRSF1A-208ENST00000536194 ZNF546Q86UE3 836 aa8.39□□□□□ -1.07
TNFRSF1A-208ENST00000536194 APRG1Q8IVJ8 170 aa8.39□□□□□ -1.07
TNFRSF1A-208ENST00000536194 OR5C1Q8NGR4 320 aa8.39□□□□□ -1.07
TNFRSF1A-208ENST00000536194 C17orf77Q96MU5 243 aa8.39□□□□□ -1.07
TNFRSF1A-208ENST00000536194 UHRF2Q96PU4 802 aa8.39□□□□□ -1.07
TNFRSF1A-208ENST00000536194 SCRT1Q9BWW7 348 aa8.39□□□□□ -1.07
TNFRSF1A-208ENST00000536194 SLC25A32Q9H2D1 315 aa8.39□□□□□ -1.07
TNFRSF1A-208ENST00000536194 TGP01266 2768 aa8.39□□□□□ -1.07
TNFRSF1A-208ENST00000536194 AGRNO00468 2067 aa8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 HELTA6NFD8 242 aa8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 ZNF98A6NK75 572 aa8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 GIPP09681 153 aaPredicted RBP8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 FGF7P21781 194 aa8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 NUP62P37198 522 aaPredicted RBP8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 CAMLGP49069 296 aa8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 PAFAH1B2P68402 229 aa8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 PRR20EP86478 221 aa8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 PRR20CP86479 221 aa8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 PRR20DP86480 221 aa8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 PRR20BP86481 221 aa8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 PRR20AP86496 221 aa8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 BAXQ07812 192 aa8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 CLINT1Q14677 625 aa8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 HAGHQ16775 308 aa8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 ATP6V1FQ16864 119 aa8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 C1orf194Q5T5A4 169 aa8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 MIC13Q5XKP0 118 aa8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 LEMD1Q68G75 181 aa8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 PPP1R14BQ96C90 147 aa8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 SLC25A39Q9BZJ4 359 aaPredicted RBP8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 ARL6Q9H0F7 186 aa8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 SLC25A22Q9H936 323 aa8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 HSPB11Q9Y547 144 aa8.38□□□□□ -1.07
TNFRSF1A-208ENST00000536194 G3V3Q6 166 aa8.37□□□□□ -1.07
TNFRSF1A-208ENST00000536194 HYPMO75409 117 aa8.37□□□□□ -1.07
TNFRSF1A-208ENST00000536194 OR5G3P0C626 314 aa8.37□□□□□ -1.07
TNFRSF1A-208ENST00000536194 ZNF688P0C7X2 276 aa8.37□□□□□ -1.07
TNFRSF1A-208ENST00000536194 RPL12P30050 165 aaKnown RBP8.37□□□□□ -1.07
TNFRSF1A-208ENST00000536194 AP2S1P53680 142 aaPredicted RBP8.37□□□□□ -1.07
TNFRSF1A-208ENST00000536194 DEFB131AP59861 70 aa8.37□□□□□ -1.07
TNFRSF1A-208ENST00000536194 OPCMLQ14982 345 aa8.37□□□□□ -1.07
TNFRSF1A-208ENST00000536194 MORN5Q5VZ52 161 aa8.37□□□□□ -1.07
TNFRSF1A-208ENST00000536194 THAP6Q8TBB0 222 aa8.37□□□□□ -1.07
TNFRSF1A-208ENST00000536194 CHAC2Q8WUX2 184 aa8.37□□□□□ -1.07
TNFRSF1A-208ENST00000536194 TMEM37Q8WXS4 190 aa8.37□□□□□ -1.07
TNFRSF1A-208ENST00000536194 TM2D3Q9BRN9 247 aa8.37□□□□□ -1.07
TNFRSF1A-208ENST00000536194 SHANK2-AS3Q9BTD1 123 aa8.37□□□□□ -1.07
TNFRSF1A-208ENST00000536194 NPCDR1Q9BY65 106 aa8.37□□□□□ -1.07
TNFRSF1A-208ENST00000536194 ARV1Q9H2C2 271 aa8.37□□□□□ -1.07
TNFRSF1A-208ENST00000536194 NRN1Q9NPD7 142 aa8.37□□□□□ -1.07
TNFRSF1A-208ENST00000536194 PFDN2Q9UHV9 154 aa8.37□□□□□ -1.07
TNFRSF1A-208ENST00000536194 HIGD1AQ9Y241 93 aa8.37□□□□□ -1.07
TNFRSF1A-208ENST00000536194 SOCS3O14543 225 aa8.36□□□□□ -1.07
TNFRSF1A-208ENST00000536194 NHLRC4P0CG21 123 aaPredicted RBP8.36□□□□□ -1.07
TNFRSF1A-208ENST00000536194 RPL29P47914 159 aaKnown RBP8.36□□□□□ -1.07
TNFRSF1A-208ENST00000536194 RAP2BP61225 183 aa8.36□□□□□ -1.07
TNFRSF1A-208ENST00000536194 OR8I2Q8N0Y5 310 aa8.36□□□□□ -1.07
TNFRSF1A-208ENST00000536194 SMIM3Q9BZL3 60 aa8.36□□□□□ -1.07
TNFRSF1A-208ENST00000536194 WFDC1Q9HC57 220 aa8.36□□□□□ -1.07
TNFRSF1A-208ENST00000536194 RETNQ9HD89 108 aa8.36□□□□□ -1.07
TNFRSF1A-208ENST00000536194 FBXL17Q9UF56 701 aa8.36□□□□□ -1.07
TNFRSF1A-208ENST00000536194 LOC102724200A0A096LPH7 203 aaPredicted RBP8.35□□□□□ -1.07
TNFRSF1A-208ENST00000536194 MRPS12O15235 138 aaKnown RBP8.35□□□□□ -1.07
TNFRSF1A-208ENST00000536194 CMC4P56277 68 aaPredicted RBP8.35□□□□□ -1.07
TNFRSF1A-208ENST00000536194 B2MP61769 119 aa8.35□□□□□ -1.07
TNFRSF1A-208ENST00000536194 RAB31Q13636 194 aa8.35□□□□□ -1.07
TNFRSF1A-208ENST00000536194 PXDC1Q5TGL8 231 aa8.35□□□□□ -1.07
TNFRSF1A-208ENST00000536194 ASB13Q8WXK3 278 aa8.35□□□□□ -1.07
TNFRSF1A-208ENST00000536194 ATP5SQ99766 215 aa8.35□□□□□ -1.07
TNFRSF1A-208ENST00000536194 WDR61Q9GZS3 305 aaKnown RBP8.35□□□□□ -1.07
TNFRSF1A-208ENST00000536194 SLC39A9Q9NUM3 307 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms