RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 HNRNPCP07910 306 aaKnown RBP eCLIP11.82□□□□□ -0.52
CNN1-202ENST00000535659 OR5G3P0C626 314 aa11.82□□□□□ -0.52
CNN1-202ENST00000535659 ATP6V0CP27449 155 aa11.82□□□□□ -0.52
CNN1-202ENST00000535659 NKX2-5P52952 324 aaPredicted RBP11.82□□□□□ -0.52
CNN1-202ENST00000535659 DNAJC4Q9NNZ3 241 aa11.82□□□□□ -0.52
CNN1-202ENST00000535659 DOK5Q9P104 306 aa11.82□□□□□ -0.52
CNN1-202ENST00000535659 PFDN2Q9UHV9 154 aa11.82□□□□□ -0.52
CNN1-202ENST00000535659 TIMM9Q9Y5J7 89 aa11.82□□□□□ -0.52
CNN1-202ENST00000535659 U3KQE9 123 aa11.82□□□□□ -0.52
CNN1-202ENST00000535659 ELOA3CA0A087WX78 387 aaPredicted RBP11.81□□□□□ -0.52
CNN1-202ENST00000535659 IGHV3-49A0A0A0MS15 119 aa11.81□□□□□ -0.52
CNN1-202ENST00000535659 A0A1W2PS18 150 aa11.81□□□□□ -0.52
CNN1-202ENST00000535659 APOHP02749 345 aaPredicted RBP11.81□□□□□ -0.52
CNN1-202ENST00000535659 IGLL1P15814 213 aa11.81□□□□□ -0.52
CNN1-202ENST00000535659 INSL3P51460 131 aa11.81□□□□□ -0.52
CNN1-202ENST00000535659 C9orf66Q5T8R8 295 aa11.81□□□□□ -0.52
CNN1-202ENST00000535659 PATE2Q6UY27 113 aa11.81□□□□□ -0.52
CNN1-202ENST00000535659 TMEM37Q8WXS4 190 aa11.81□□□□□ -0.52
CNN1-202ENST00000535659 GNPNAT1Q96EK6 184 aaPredicted RBP11.81□□□□□ -0.52
CNN1-202ENST00000535659 NARS2Q96I59 477 aaKnown RBP11.81□□□□□ -0.52
CNN1-202ENST00000535659 RHPN1-AS1Q9BWJ2 59 aa11.81□□□□□ -0.52
CNN1-202ENST00000535659 ZNF471Q9BX82 626 aaPredicted RBP11.81□□□□□ -0.52
CNN1-202ENST00000535659 ARV1Q9H2C2 271 aa11.81□□□□□ -0.52
CNN1-202ENST00000535659 RFNGQ9Y644 331 aa11.81□□□□□ -0.52
CNN1-202ENST00000535659 IGHV3OR16-13A0A075B7E8 117 aa11.81□□□□□ -0.52
CNN1-202ENST00000535659 IGHV3-74A0A0B4J1X5 117 aa11.81□□□□□ -0.52
CNN1-202ENST00000535659 CHEK1O14757 476 aa11.81□□□□□ -0.52
CNN1-202ENST00000535659 S100A7P31151 101 aa11.81□□□□□ -0.52
CNN1-202ENST00000535659 OR1L4Q8NGR5 311 aa11.81□□□□□ -0.52
CNN1-202ENST00000535659 PSMG3Q9BT73 122 aaPredicted RBP11.81□□□□□ -0.52
CNN1-202ENST00000535659 VSIRQ9H7M9 311 aa11.81□□□□□ -0.52
CNN1-202ENST00000535659 HIGD1AQ9Y241 93 aa11.81□□□□□ -0.52
CNN1-202ENST00000535659 BUB3O43684 328 aa11.8□□□□□ -0.52
CNN1-202ENST00000535659 COX7A2P2O60397 106 aa11.8□□□□□ -0.52
CNN1-202ENST00000535659 C4BPBP20851 252 aa11.8□□□□□ -0.52
CNN1-202ENST00000535659 BMI1P35226 326 aa11.8□□□□□ -0.52
CNN1-202ENST00000535659 EIF5AP63241 154 aaKnown RBP11.8□□□□□ -0.52
CNN1-202ENST00000535659 FFAR4Q5NUL3 377 aa11.8□□□□□ -0.52
CNN1-202ENST00000535659 C10orf113Q5VZT2 155 aa11.8□□□□□ -0.52
CNN1-202ENST00000535659 S100A7AQ86SG5 101 aa11.8□□□□□ -0.52
CNN1-202ENST00000535659 GATAD1Q8WUU5 269 aa11.8□□□□□ -0.52
CNN1-202ENST00000535659 ST8SIA2Q92186 375 aa11.8□□□□□ -0.52
CNN1-202ENST00000535659 PPP1R14BQ96C90 147 aa11.8□□□□□ -0.52
CNN1-202ENST00000535659 PFDN5Q99471 154 aa11.8□□□□□ -0.52
CNN1-202ENST00000535659 TECRQ9NZ01 308 aaKnown RBP11.8□□□□□ -0.52
CNN1-202ENST00000535659 IGHV3-66A0A0C4DH42 116 aa11.79□□□□□ -0.52
CNN1-202ENST00000535659 SERF2P84101 59 aa11.79□□□□□ -0.52
CNN1-202ENST00000535659 DEFB114Q30KQ6 69 aa11.79□□□□□ -0.52
CNN1-202ENST00000535659 DYNLRB2Q8TF09 96 aa11.79□□□□□ -0.52
CNN1-202ENST00000535659 GRAMD2BQ96HH9 432 aa11.79□□□□□ -0.52
CNN1-202ENST00000535659 SLC25A39Q9BZJ4 359 aaPredicted RBP11.79□□□□□ -0.52
CNN1-202ENST00000535659 SH3BGRL3Q9H299 93 aa11.79□□□□□ -0.52
CNN1-202ENST00000535659 TMEM231Q9H6L2 316 aa11.79□□□□□ -0.52
CNN1-202ENST00000535659 MLXQ9UH92 298 aa11.79□□□□□ -0.52
CNN1-202ENST00000535659 ZNF98A6NK75 572 aa11.78□□□□□ -0.52
CNN1-202ENST00000535659 IGLV1-51P01701 117 aa11.78□□□□□ -0.52
CNN1-202ENST00000535659 GCSAMLQ5JQS6 135 aa11.78□□□□□ -0.52
CNN1-202ENST00000535659 LINC00305Q7Z4B0 112 aa11.78□□□□□ -0.52
CNN1-202ENST00000535659 BAP18Q8IXM2 172 aa11.78□□□□□ -0.52
CNN1-202ENST00000535659 OR2G3Q8NGZ4 309 aa11.78□□□□□ -0.52
CNN1-202ENST00000535659 UHRF2Q96PU4 802 aa11.78□□□□□ -0.52
CNN1-202ENST00000535659 SHANK2-AS3Q9BTD1 123 aa11.78□□□□□ -0.52
CNN1-202ENST00000535659 GPR61Q9BZJ8 451 aa11.78□□□□□ -0.52
CNN1-202ENST00000535659 SLC25A32Q9H2D1 315 aa11.78□□□□□ -0.52
CNN1-202ENST00000535659 BOLA2-SMG1P6H3BVE0 249 aa11.77□□□□□ -0.52
CNN1-202ENST00000535659 WIPF1O43516 503 aa11.77□□□□□ -0.52
CNN1-202ENST00000535659 TPT1P13693 172 aaKnown RBP11.77□□□□□ -0.52
CNN1-202ENST00000535659 ACOT6Q3I5F7 207 aaPredicted RBP11.77□□□□□ -0.52
CNN1-202ENST00000535659 OXLD1Q5BKU9 147 aa11.77□□□□□ -0.52
CNN1-202ENST00000535659 C1orf194Q5T5A4 169 aa11.77□□□□□ -0.52
CNN1-202ENST00000535659 C16orf54Q6UWD8 224 aa11.77□□□□□ -0.52
CNN1-202ENST00000535659 SLC51BQ86UW2 128 aa11.77□□□□□ -0.52
CNN1-202ENST00000535659 STOML3Q8TAV4 291 aa11.77□□□□□ -0.52
CNN1-202ENST00000535659 RNF2Q99496 336 aa11.77□□□□□ -0.52
CNN1-202ENST00000535659 SELENOKQ9Y6D0 94 aa11.77□□□□□ -0.52
CNN1-202ENST00000535659 H3BRN7 92 aa11.76□□□□□ -0.53
CNN1-202ENST00000535659 MBP02144 154 aa11.76□□□□□ -0.53
CNN1-202ENST00000535659 CD5P06127 495 aa11.76□□□□□ -0.53
CNN1-202ENST00000535659 SPP1P10451 314 aa11.76□□□□□ -0.53
CNN1-202ENST00000535659 RNF24Q9Y225 148 aa11.76□□□□□ -0.53
CNN1-202ENST00000535659 BOLA1Q9Y3E2 137 aa11.76□□□□□ -0.53
CNN1-202ENST00000535659 SEC11BP0C7V7 166 aa11.76□□□□□ -0.53
CNN1-202ENST00000535659 M6PRP20645 277 aa11.76□□□□□ -0.53
CNN1-202ENST00000535659 CD300EQ496F6 205 aaPredicted RBP11.76□□□□□ -0.53
CNN1-202ENST00000535659 FAM78BQ5VT40 261 aa11.76□□□□□ -0.53
CNN1-202ENST00000535659 FAM90A2PQ658T7 463 aa11.76□□□□□ -0.53
CNN1-202ENST00000535659 LEMD1Q68G75 181 aa11.76□□□□□ -0.53
CNN1-202ENST00000535659 RBPMS2Q6ZRY4 209 aaKnown RBP11.76□□□□□ -0.53
CNN1-202ENST00000535659 OR8I2Q8N0Y5 310 aa11.76□□□□□ -0.53
CNN1-202ENST00000535659 OR2K2Q8NGT1 345 aa11.76□□□□□ -0.53
CNN1-202ENST00000535659 GLMPQ8WWB7 406 aa11.76□□□□□ -0.53
CNN1-202ENST00000535659 SCRT1Q9BWW7 348 aa11.76□□□□□ -0.53
CNN1-202ENST00000535659 SLC25A22Q9H936 323 aa11.76□□□□□ -0.53
CNN1-202ENST00000535659 SEPSECSQ9HD40 501 aaKnown RBP11.76□□□□□ -0.53
CNN1-202ENST00000535659 NOTCH3Q9UM47 2321 aa11.75□□□□□ -0.53
CNN1-202ENST00000535659 MORN5Q5VZ52 161 aa11.75□□□□□ -0.53
CNN1-202ENST00000535659 TCF24Q7RTU0 167 aa11.75□□□□□ -0.53
CNN1-202ENST00000535659 OR10G4Q8NGN3 311 aa11.75□□□□□ -0.53
CNN1-202ENST00000535659 OR10G9Q8NGN4 311 aa11.75□□□□□ -0.53
CNN1-202ENST00000535659 OR10G7Q8NGN6 311 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms