RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 SPCS2Q15005 226 aa12.77□□□□□ -0.37
UBXN1-216ENST00000533908 OXA1LQ15070 435 aa12.77□□□□□ -0.37
UBXN1-216ENST00000533908 C1orf194Q5T5A4 169 aa12.77□□□□□ -0.37
UBXN1-216ENST00000533908 KCNIP3Q9Y2W7 256 aa12.77□□□□□ -0.37
UBXN1-216ENST00000533908 A0A0B4J2A0 478 aa12.76□□□□□ -0.37
UBXN1-216ENST00000533908 A0A0J9YX75 114 aa12.76□□□□□ -0.37
UBXN1-216ENST00000533908 LOC102723971A0A1B0GUV8 181 aa12.76□□□□□ -0.37
UBXN1-216ENST00000533908 ANKRD20A5PA0PJZ0 165 aa12.76□□□□□ -0.37
UBXN1-216ENST00000533908 RNF212Q495C1 297 aa12.76□□□□□ -0.37
UBXN1-216ENST00000533908 CLVS1Q8IUQ0 354 aaPredicted RBP12.76□□□□□ -0.37
UBXN1-216ENST00000533908 COQ8AQ8NI60 647 aa12.76□□□□□ -0.37
UBXN1-216ENST00000533908 PRRT1Q99946 306 aa12.76□□□□□ -0.37
UBXN1-216ENST00000533908 CACFD1Q9UGQ2 172 aa12.76□□□□□ -0.37
UBXN1-216ENST00000533908 SHPKQ9UHJ6 478 aa12.76□□□□□ -0.37
UBXN1-216ENST00000533908 SNRPGP15A8MWD9 76 aa12.75□□□□□ -0.37
UBXN1-216ENST00000533908 CTDSPLO15194 276 aa12.75□□□□□ -0.37
UBXN1-216ENST00000533908 AKR1C4P17516 323 aa12.75□□□□□ -0.37
UBXN1-216ENST00000533908 NUP62P37198 522 aaPredicted RBP12.75□□□□□ -0.37
UBXN1-216ENST00000533908 TMEM88Q6PEY1 159 aa12.75□□□□□ -0.37
UBXN1-216ENST00000533908 AMTNQ6UX39 209 aa12.75□□□□□ -0.37
UBXN1-216ENST00000533908 A8MTW9 85 aa12.74□□□□□ -0.37
UBXN1-216ENST00000533908 ISLRO14498 428 aa12.74□□□□□ -0.37
UBXN1-216ENST00000533908 HBE1P02100 147 aa12.74□□□□□ -0.37
UBXN1-216ENST00000533908 SPATA31B1PQ5VZV4 182 aa12.74□□□□□ -0.37
UBXN1-216ENST00000533908 OR8I2Q8N0Y5 310 aa12.74□□□□□ -0.37
UBXN1-216ENST00000533908 SLC35E1Q96K37 410 aa12.74□□□□□ -0.37
UBXN1-216ENST00000533908 PFDN2Q9UHV9 154 aa12.74□□□□□ -0.37
UBXN1-216ENST00000533908 GOLT1BQ9Y3E0 138 aa12.74□□□□□ -0.37
UBXN1-216ENST00000533908 TEX48A0A1B0GUV7 120 aa12.73□□□□□ -0.37
UBXN1-216ENST00000533908 PITX3O75364 302 aa12.73□□□□□ -0.37
UBXN1-216ENST00000533908 ATP5IP56385 69 aaPredicted RBP12.73□□□□□ -0.37
UBXN1-216ENST00000533908 IL18Q14116 193 aa12.73□□□□□ -0.37
UBXN1-216ENST00000533908 RRN3P1Q2M238 152 aa12.73□□□□□ -0.37
UBXN1-216ENST00000533908 C1orf134Q5TEV5 83 aa12.73□□□□□ -0.37
UBXN1-216ENST00000533908 EBLN2Q6P2I7 272 aa12.73□□□□□ -0.37
UBXN1-216ENST00000533908 TMEM182Q6ZP80 229 aaPredicted RBP12.73□□□□□ -0.37
UBXN1-216ENST00000533908 DIRAS2Q96HU8 199 aa12.73□□□□□ -0.37
UBXN1-216ENST00000533908 TRGV9Q99603 122 aa12.73□□□□□ -0.37
UBXN1-216ENST00000533908 C7orf50Q9BRJ6 194 aaKnown RBP12.73□□□□□ -0.37
UBXN1-216ENST00000533908 SLC25A32Q9H2D1 315 aa12.73□□□□□ -0.37
UBXN1-216ENST00000533908 IGFL4Q6B9Z1 124 aa12.72□□□□□ -0.37
UBXN1-216ENST00000533908 THAP8Q8NA92 274 aa12.72□□□□□ -0.37
UBXN1-216ENST00000533908 OR1S1Q8NH92 325 aa12.72□□□□□ -0.37
UBXN1-216ENST00000533908 PPP1R14BQ96C90 147 aa12.72□□□□□ -0.37
UBXN1-216ENST00000533908 ZNF705GA8MUZ8 300 aaPredicted RBP12.71□□□□□ -0.37
UBXN1-216ENST00000533908 CRXO43186 299 aaPredicted RBP12.71□□□□□ -0.37
UBXN1-216ENST00000533908 IAPPP10997 89 aa12.71□□□□□ -0.37
UBXN1-216ENST00000533908 GATA2P23769 480 aaPredicted RBP12.71□□□□□ -0.37
UBXN1-216ENST00000533908 ALDH3B2P48448 385 aa12.71□□□□□ -0.37
UBXN1-216ENST00000533908 DAD1P61803 113 aa12.71□□□□□ -0.37
UBXN1-216ENST00000533908 C16orf92Q96LL3 132 aa12.71□□□□□ -0.37
UBXN1-216ENST00000533908 IGF2BP2-AS1Q96M15 143 aa12.71□□□□□ -0.37
UBXN1-216ENST00000533908 RSG1Q9BU20 258 aa12.71□□□□□ -0.37
UBXN1-216ENST00000533908 MAGT1Q9H0U3 335 aa12.71□□□□□ -0.37
UBXN1-216ENST00000533908 RPRMQ9NS64 109 aa12.71□□□□□ -0.37
UBXN1-216ENST00000533908 DOK5Q9P104 306 aa12.71□□□□□ -0.37
UBXN1-216ENST00000533908 ZNF98A6NK75 572 aa12.7□□□□□ -0.38
UBXN1-216ENST00000533908 PRSS46E5RG02 174 aa12.7□□□□□ -0.38
UBXN1-216ENST00000533908 FABP1P07148 127 aa12.7□□□□□ -0.38
UBXN1-216ENST00000533908 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.7□□□□□ -0.38
UBXN1-216ENST00000533908 SOSTQ9BQB4 213 aa12.7□□□□□ -0.38
UBXN1-216ENST00000533908 SLC25A22Q9H936 323 aa12.7□□□□□ -0.38
UBXN1-216ENST00000533908 SCP2D1Q9UJQ7 156 aa12.7□□□□□ -0.38
UBXN1-216ENST00000533908 HSPG2P98160 4391 aa12.7□□□□□ -0.38
UBXN1-216ENST00000533908 TRAV8-2A0A0B4J237 113 aa12.69□□□□□ -0.38
UBXN1-216ENST00000533908 TNP2Q05952 138 aa12.69□□□□□ -0.38
UBXN1-216ENST00000533908 FCN2Q15485 313 aa12.69□□□□□ -0.38
UBXN1-216ENST00000533908 SOHLH1Q5JUK2 328 aa12.69□□□□□ -0.38
UBXN1-216ENST00000533908 OR11H7Q8NGC8 314 aa12.69□□□□□ -0.38
UBXN1-216ENST00000533908 DYNC2LI1Q8TCX1 351 aa12.69□□□□□ -0.38
UBXN1-216ENST00000533908 SCGB3A2Q96PL1 93 aa12.69□□□□□ -0.38
UBXN1-216ENST00000533908 MCUBQ9NWR8 336 aa12.69□□□□□ -0.38
UBXN1-216ENST00000533908 M0R2Z0 102 aa12.68□□□□□ -0.38
UBXN1-216ENST00000533908 AZU1P20160 251 aa12.68□□□□□ -0.38
UBXN1-216ENST00000533908 CNN1P51911 297 aaKnown RBP12.68□□□□□ -0.38
UBXN1-216ENST00000533908 SPINK13Q1W4C9 94 aa12.68□□□□□ -0.38
UBXN1-216ENST00000533908 PAIP2BQ9ULR5 123 aaKnown RBP12.68□□□□□ -0.38
UBXN1-216ENST00000533908 PLAC8L1A1L4L8 177 aa12.67□□□□□ -0.38
UBXN1-216ENST00000533908 GALR1P47211 349 aa12.67□□□□□ -0.38
UBXN1-216ENST00000533908 MEOX2P50222 304 aa12.67□□□□□ -0.38
UBXN1-216ENST00000533908 RAB11AP62491 216 aa12.67□□□□□ -0.38
UBXN1-216ENST00000533908 RNF182Q8N6D2 247 aa12.67□□□□□ -0.38
UBXN1-216ENST00000533908 TMEM208Q9BTX3 173 aa12.67□□□□□ -0.38
UBXN1-216ENST00000533908 ANXA3P12429 323 aa12.66□□□□□ -0.38
UBXN1-216ENST00000533908 ORM2P19652 201 aa12.66□□□□□ -0.38
UBXN1-216ENST00000533908 TNFSF8P32971 234 aa12.66□□□□□ -0.38
UBXN1-216ENST00000533908 SRPXP78539 464 aa12.66□□□□□ -0.38
UBXN1-216ENST00000533908 SAMD13Q5VXD3 122 aa12.66□□□□□ -0.38
UBXN1-216ENST00000533908 GGNBP1Q5YKI7 109 aa12.66□□□□□ -0.38
UBXN1-216ENST00000533908 GPR141Q7Z602 305 aa12.66□□□□□ -0.38
UBXN1-216ENST00000533908 C15orf53Q8NAA6 179 aa12.66□□□□□ -0.38
UBXN1-216ENST00000533908 OR4D5Q8NGN0 318 aa12.66□□□□□ -0.38
UBXN1-216ENST00000533908 ZNRF2Q8NHG8 242 aa12.66□□□□□ -0.38
UBXN1-216ENST00000533908 RABL2AQ9UBK7 228 aaPredicted RBP12.66□□□□□ -0.38
UBXN1-216ENST00000533908 SLC45A2Q9UMX9 530 aa12.66□□□□□ -0.38
UBXN1-216ENST00000533908 RABL2BQ9UNT1 228 aa12.66□□□□□ -0.38
UBXN1-216ENST00000533908 DEFB130BP0DP73 79 aa12.65□□□□□ -0.38
UBXN1-216ENST00000533908 DEFB130AP0DP74 79 aa12.65□□□□□ -0.38
UBXN1-216ENST00000533908 TMED4Q7Z7H5 227 aa12.65□□□□□ -0.38
UBXN1-216ENST00000533908 BAP18Q8IXM2 172 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms