RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 RSG1Q9BU20 258 aa13.22□□□□□ -0.29
NXF1-216ENST00000533499 SLC39A9Q9NUM3 307 aa13.22□□□□□ -0.29
NXF1-216ENST00000533499 TECRQ9NZ01 308 aaKnown RBP13.22□□□□□ -0.29
NXF1-216ENST00000533499 HIGD1AQ9Y241 93 aa13.22□□□□□ -0.29
NXF1-216ENST00000533499 CMYA5Q8N3K9 4069 aa13.21□□□□□ -0.29
NXF1-216ENST00000533499 IGLV1-51P01701 117 aa13.21□□□□□ -0.29
NXF1-216ENST00000533499 C1QBP02746 253 aa13.21□□□□□ -0.29
NXF1-216ENST00000533499 C8orf88P0DMB2 117 aa13.21□□□□□ -0.29
NXF1-216ENST00000533499 CXCL2P19875 107 aa13.21□□□□□ -0.29
NXF1-216ENST00000533499 CRYBB3P26998 211 aa13.21□□□□□ -0.29
NXF1-216ENST00000533499 DEFB114Q30KQ6 69 aa13.21□□□□□ -0.29
NXF1-216ENST00000533499 SAMD5Q5TGI4 173 aa13.21□□□□□ -0.29
NXF1-216ENST00000533499 RPL7L1Q6DKI1 246 aaKnown RBP13.21□□□□□ -0.29
NXF1-216ENST00000533499 RNF2Q99496 336 aa13.21□□□□□ -0.29
NXF1-216ENST00000533499 SLC25A22Q9H936 323 aa13.21□□□□□ -0.29
NXF1-216ENST00000533499 KCNIP2Q9NS61 270 aa13.21□□□□□ -0.29
NXF1-216ENST00000533499 SIGLEC8Q9NYZ4 499 aa13.21□□□□□ -0.29
NXF1-216ENST00000533499 A0A0D9SG52 128 aa13.2□□□□□ -0.3
NXF1-216ENST00000533499 KANTRA0A1W2PQU2 76 aa13.2□□□□□ -0.3
NXF1-216ENST00000533499 RPL29P47914 159 aaKnown RBP13.2□□□□□ -0.3
NXF1-216ENST00000533499 LAMTOR1Q6IAA8 161 aa13.2□□□□□ -0.3
NXF1-216ENST00000533499 TCF24Q7RTU0 167 aa13.2□□□□□ -0.3
NXF1-216ENST00000533499 KCNRGQ8N5I3 272 aa13.2□□□□□ -0.3
NXF1-216ENST00000533499 HYLS1Q96M11 299 aa13.2□□□□□ -0.3
NXF1-216ENST00000533499 UHRF2Q96PU4 802 aa13.2□□□□□ -0.3
NXF1-216ENST00000533499 ARPC5LQ9BPX5 153 aa13.2□□□□□ -0.3
NXF1-216ENST00000533499 IZUMO1RA6ND01 250 aa13.19□□□□□ -0.3
NXF1-216ENST00000533499 TAAR5O14804 337 aa13.19□□□□□ -0.3
NXF1-216ENST00000533499 S100A7P31151 101 aa13.19□□□□□ -0.3
NXF1-216ENST00000533499 TFPI2P48307 235 aa13.19□□□□□ -0.3
NXF1-216ENST00000533499 FFAR4Q5NUL3 377 aa13.19□□□□□ -0.3
NXF1-216ENST00000533499 C10orf113Q5VZT2 155 aa13.19□□□□□ -0.3
NXF1-216ENST00000533499 LCN12Q6JVE5 192 aa13.19□□□□□ -0.3
NXF1-216ENST00000533499 TMUB2Q71RG4 321 aa13.19□□□□□ -0.3
NXF1-216ENST00000533499 TMEM61Q8N0U2 210 aa13.19□□□□□ -0.3
NXF1-216ENST00000533499 GBGT1Q8N5D6 347 aa13.19□□□□□ -0.3
NXF1-216ENST00000533499 NEURL2Q9BR09 285 aa13.19□□□□□ -0.3
NXF1-216ENST00000533499 ARV1Q9H2C2 271 aa13.19□□□□□ -0.3
NXF1-216ENST00000533499 RFNGQ9Y644 331 aa13.19□□□□□ -0.3
NXF1-216ENST00000533499 PRR20EP86478 221 aa13.18□□□□□ -0.3
NXF1-216ENST00000533499 PRR20CP86479 221 aa13.18□□□□□ -0.3
NXF1-216ENST00000533499 PRR20DP86480 221 aa13.18□□□□□ -0.3
NXF1-216ENST00000533499 PRR20BP86481 221 aa13.18□□□□□ -0.3
NXF1-216ENST00000533499 PRR20AP86496 221 aa13.18□□□□□ -0.3
NXF1-216ENST00000533499 ZNF345Q14585 488 aa13.18□□□□□ -0.3
NXF1-216ENST00000533499 PXDC1Q5TGL8 231 aa13.18□□□□□ -0.3
NXF1-216ENST00000533499 LEMD1Q68G75 181 aa13.18□□□□□ -0.3
NXF1-216ENST00000533499 S100A7AQ86SG5 101 aa13.18□□□□□ -0.3
NXF1-216ENST00000533499 WFDC3Q8IUB2 231 aa13.18□□□□□ -0.3
NXF1-216ENST00000533499 OR8I2Q8N0Y5 310 aa13.18□□□□□ -0.3
NXF1-216ENST00000533499 OR1L4Q8NGR5 311 aa13.18□□□□□ -0.3
NXF1-216ENST00000533499 SCRT1Q9BWW7 348 aa13.18□□□□□ -0.3
NXF1-216ENST00000533499 ZNF471Q9BX82 626 aaPredicted RBP13.18□□□□□ -0.3
NXF1-216ENST00000533499 VSIRQ9H7M9 311 aa13.18□□□□□ -0.3
NXF1-216ENST00000533499 PRB2P02812 416 aaPredicted RBP13.17□□□□□ -0.3
NXF1-216ENST00000533499 GCSAMLQ5JQS6 135 aa13.17□□□□□ -0.3
NXF1-216ENST00000533499 PATE2Q6UY27 113 aa13.17□□□□□ -0.3
NXF1-216ENST00000533499 LINC00305Q7Z4B0 112 aa13.17□□□□□ -0.3
NXF1-216ENST00000533499 STXBP6Q8NFX7 210 aa13.17□□□□□ -0.3
NXF1-216ENST00000533499 PRR25Q96S07 402 aa13.17□□□□□ -0.3
NXF1-216ENST00000533499 SLC25A39Q9BZJ4 359 aaPredicted RBP13.17□□□□□ -0.3
NXF1-216ENST00000533499 DNAJC4Q9NNZ3 241 aa13.17□□□□□ -0.3
NXF1-216ENST00000533499 ZMAT5Q9UDW3 170 aaKnown RBP13.17□□□□□ -0.3
NXF1-216ENST00000533499 ZNF256Q9Y2P7 627 aaPredicted RBP13.17□□□□□ -0.3
NXF1-216ENST00000533499 U3KQE9 123 aa13.17□□□□□ -0.3
NXF1-216ENST00000533499 SORL1Q92673 2214 aa13.17□□□□□ -0.3
NXF1-216ENST00000533499 ZNF98A6NK75 572 aa13.16□□□□□ -0.3
NXF1-216ENST00000533499 DNASE2O00115 360 aaPredicted RBP13.16□□□□□ -0.3
NXF1-216ENST00000533499 BCL2L11O43521 198 aa13.16□□□□□ -0.3
NXF1-216ENST00000533499 BUB3O43684 328 aa13.16□□□□□ -0.3
NXF1-216ENST00000533499 JTBO76095 146 aa13.16□□□□□ -0.3
NXF1-216ENST00000533499 GP9P14770 177 aa13.16□□□□□ -0.3
NXF1-216ENST00000533499 ATP6V0CP27449 155 aa13.16□□□□□ -0.3
NXF1-216ENST00000533499 PLP1P60201 277 aa13.16□□□□□ -0.3
NXF1-216ENST00000533499 KRTAP10-11P60412 298 aa13.16□□□□□ -0.3
NXF1-216ENST00000533499 C16orf54Q6UWD8 224 aa13.16□□□□□ -0.3
NXF1-216ENST00000533499 OR2K2Q8NGT1 345 aa13.16□□□□□ -0.3
NXF1-216ENST00000533499 PFDN5Q99471 154 aa13.16□□□□□ -0.3
NXF1-216ENST00000533499 PARD6GQ9BYG4 376 aaPredicted RBP13.16□□□□□ -0.3
NXF1-216ENST00000533499 NOTCH1P46531 2555 aa13.16□□□□□ -0.3
NXF1-216ENST00000533499 ELOA3CA0A087WX78 387 aaPredicted RBP13.15□□□□□ -0.3
NXF1-216ENST00000533499 HELTA6NFD8 242 aa13.15□□□□□ -0.3
NXF1-216ENST00000533499 NKX2-5P52952 324 aaPredicted RBP13.15□□□□□ -0.3
NXF1-216ENST00000533499 BEAN1Q3B7T3 259 aa13.15□□□□□ -0.3
NXF1-216ENST00000533499 LGALSLQ3ZCW2 172 aaPredicted RBP13.15□□□□□ -0.3
NXF1-216ENST00000533499 SIGLEC15Q6ZMC9 328 aa13.15□□□□□ -0.3
NXF1-216ENST00000533499 TMEM37Q8WXS4 190 aa13.15□□□□□ -0.3
NXF1-216ENST00000533499 SHANK2-AS3Q9BTD1 123 aa13.15□□□□□ -0.3
NXF1-216ENST00000533499 SH3BGRL3Q9H299 93 aa13.15□□□□□ -0.3
NXF1-216ENST00000533499 CYTL1Q9NRR1 136 aa13.15□□□□□ -0.3
NXF1-216ENST00000533499 TRAV25A0A0B4J276 109 aa13.14□□□□□ -0.31
NXF1-216ENST00000533499 ZNF785A8K8V0 405 aa13.14□□□□□ -0.31
NXF1-216ENST00000533499 H3BRN7 92 aa13.14□□□□□ -0.31
NXF1-216ENST00000533499 WIPF1O43516 503 aa13.14□□□□□ -0.31
NXF1-216ENST00000533499 PAFAH1B2P68402 229 aa13.14□□□□□ -0.31
NXF1-216ENST00000533499 FAM78BQ5VT40 261 aa13.14□□□□□ -0.31
NXF1-216ENST00000533499 GLMPQ8WWB7 406 aa13.14□□□□□ -0.31
NXF1-216ENST00000533499 GNPNAT1Q96EK6 184 aaPredicted RBP13.14□□□□□ -0.31
NXF1-216ENST00000533499 SLC25A32Q9H2D1 315 aa13.14□□□□□ -0.31
NXF1-216ENST00000533499 TIMM9Q9Y5J7 89 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms