RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 NPVFQ9HCQ7 196 aa12.45□□□□□ -0.42
PKP3-209ENST00000533069 OR4C46A6NHA9 309 aa12.44□□□□□ -0.42
PKP3-209ENST00000533069 CLN5O75503 358 aa12.44□□□□□ -0.42
PKP3-209ENST00000533069 NKX2-5P52952 324 aaPredicted RBP12.44□□□□□ -0.42
PKP3-209ENST00000533069 RAB31Q13636 194 aa12.44□□□□□ -0.42
PKP3-209ENST00000533069 OPCMLQ14982 345 aa12.44□□□□□ -0.42
PKP3-209ENST00000533069 EIF5AL1Q6IS14 154 aaKnown RBP12.44□□□□□ -0.42
PKP3-209ENST00000533069 OR4X1Q8NH49 305 aa12.44□□□□□ -0.42
PKP3-209ENST00000533069 RHPN1-AS1Q9BWJ2 59 aa12.44□□□□□ -0.42
PKP3-209ENST00000533069 FNDC4Q9H6D8 234 aaPredicted RBP12.44□□□□□ -0.42
PKP3-209ENST00000533069 KCNIP2Q9NS61 270 aa12.44□□□□□ -0.42
PKP3-209ENST00000533069 CHEK1O14757 476 aa12.43□□□□□ -0.42
PKP3-209ENST00000533069 CD5P06127 495 aa12.43□□□□□ -0.42
PKP3-209ENST00000533069 TOMM20LQ6UXN7 152 aa12.43□□□□□ -0.42
PKP3-209ENST00000533069 TMEM144Q7Z5S9 345 aa12.43□□□□□ -0.42
PKP3-209ENST00000533069 STOML3Q8TAV4 291 aa12.43□□□□□ -0.42
PKP3-209ENST00000533069 SCGB1C1Q8TD33 95 aa12.43□□□□□ -0.42
PKP3-209ENST00000533069 FAM110AQ9BQ89 295 aa12.43□□□□□ -0.42
PKP3-209ENST00000533069 GGTLC1Q9BX51 225 aa12.43□□□□□ -0.42
PKP3-209ENST00000533069 KMT2CQ8NEZ4 4911 aaKnown RBP12.43□□□□□ -0.42
PKP3-209ENST00000533069 TRAV30A0A087WSZ9 112 aa12.42□□□□□ -0.42
PKP3-209ENST00000533069 FABP1P07148 127 aa12.42□□□□□ -0.42
PKP3-209ENST00000533069 TPT1P13693 172 aaKnown RBP12.42□□□□□ -0.42
PKP3-209ENST00000533069 ARL16Q0P5N6 197 aa12.42□□□□□ -0.42
PKP3-209ENST00000533069 CLINT1Q14677 625 aa12.42□□□□□ -0.42
PKP3-209ENST00000533069 GNPNAT1Q96EK6 184 aaPredicted RBP12.42□□□□□ -0.42
PKP3-209ENST00000533069 RNF2Q99496 336 aa12.42□□□□□ -0.42
PKP3-209ENST00000533069 ZNF471Q9BX82 626 aaPredicted RBP12.42□□□□□ -0.42
PKP3-209ENST00000533069 ZFAND3Q9H8U3 227 aa12.42□□□□□ -0.42
PKP3-209ENST00000533069 EDA2RQ9HAV5 297 aa12.42□□□□□ -0.42
PKP3-209ENST00000533069 PUS1Q9Y606 427 aaKnown RBP eCLIP12.42□□□□□ -0.42
PKP3-209ENST00000533069 LOC102724200A0A096LPH7 203 aaPredicted RBP12.41□□□□□ -0.42
PKP3-209ENST00000533069 C17orf112F2Z3M2 114 aa12.41□□□□□ -0.42
PKP3-209ENST00000533069 AKR1C1Q04828 323 aa12.41□□□□□ -0.42
PKP3-209ENST00000533069 TEPPQ6URK8 271 aa12.41□□□□□ -0.42
PKP3-209ENST00000533069 PHYHIPLQ96FC7 376 aa12.41□□□□□ -0.42
PKP3-209ENST00000533069 MRPL36Q9P0J6 103 aaKnown RBP12.41□□□□□ -0.42
PKP3-209ENST00000533069 WDR83OSQ9Y284 106 aa12.41□□□□□ -0.42
PKP3-209ENST00000533069 DNAH7Q8WXX0 4024 aa12.41□□□□□ -0.42
PKP3-209ENST00000533069 SMCO3A2RU48 225 aa12.4□□□□□ -0.42
PKP3-209ENST00000533069 CMC4P56277 68 aaPredicted RBP12.4□□□□□ -0.42
PKP3-209ENST00000533069 GAMTQ14353 236 aa12.4□□□□□ -0.42
PKP3-209ENST00000533069 SMIM3Q9BZL3 60 aa12.4□□□□□ -0.42
PKP3-209ENST00000533069 WDR61Q9GZS3 305 aaKnown RBP12.4□□□□□ -0.42
PKP3-209ENST00000533069 TMEM231Q9H6L2 316 aa12.4□□□□□ -0.42
PKP3-209ENST00000533069 VSIRQ9H7M9 311 aa12.4□□□□□ -0.42
PKP3-209ENST00000533069 TIMM9Q9Y5J7 89 aa12.4□□□□□ -0.42
PKP3-209ENST00000533069 IGHV3-49A0A0A0MS15 119 aa12.39□□□□□ -0.43
PKP3-209ENST00000533069 SELENOTP62341 195 aa12.39□□□□□ -0.43
PKP3-209ENST00000533069 MLANAQ16655 118 aa12.39□□□□□ -0.43
PKP3-209ENST00000533069 ODF3L2Q3SX64 289 aa12.39□□□□□ -0.43
PKP3-209ENST00000533069 BAP18Q8IXM2 172 aa12.39□□□□□ -0.43
PKP3-209ENST00000533069 ZNF709Q8N972 641 aa12.39□□□□□ -0.43
PKP3-209ENST00000533069 ARV1Q9H2C2 271 aa12.39□□□□□ -0.43
PKP3-209ENST00000533069 RETNQ9HD89 108 aa12.39□□□□□ -0.43
PKP3-209ENST00000533069 CYTL1Q9NRR1 136 aa12.39□□□□□ -0.43
PKP3-209ENST00000533069 UBQLN2Q9UHD9 624 aa12.39□□□□□ -0.43
PKP3-209ENST00000533069 IGHV3OR16-13A0A075B7E8 117 aa12.38□□□□□ -0.43
PKP3-209ENST00000533069 IGHV3-74A0A0B4J1X5 117 aa12.38□□□□□ -0.43
PKP3-209ENST00000533069 UBE2L5PA0A1B0GUS4 154 aa12.38□□□□□ -0.43
PKP3-209ENST00000533069 A0A1W2PS18 150 aa12.38□□□□□ -0.43
PKP3-209ENST00000533069 CFDP00746 253 aaPredicted RBP12.38□□□□□ -0.43
PKP3-209ENST00000533069 IGKV1-17P01599 117 aa12.38□□□□□ -0.43
PKP3-209ENST00000533069 NPPCP23582 126 aa12.38□□□□□ -0.43
PKP3-209ENST00000533069 RND2P52198 227 aa12.38□□□□□ -0.43
PKP3-209ENST00000533069 APOC4P55056 127 aa12.38□□□□□ -0.43
PKP3-209ENST00000533069 PAFAH1B2P68402 229 aa12.38□□□□□ -0.43
PKP3-209ENST00000533069 CASC10Q5T4H9 136 aa12.38□□□□□ -0.43
PKP3-209ENST00000533069 FAM90A2PQ658T7 463 aa12.38□□□□□ -0.43
PKP3-209ENST00000533069 RPL7L1Q6DKI1 246 aaKnown RBP12.38□□□□□ -0.43
PKP3-209ENST00000533069 THAP8Q8NA92 274 aa12.38□□□□□ -0.43
PKP3-209ENST00000533069 ST8SIA2Q92186 375 aa12.38□□□□□ -0.43
PKP3-209ENST00000533069 METTL26Q96S19 204 aa12.38□□□□□ -0.43
PKP3-209ENST00000533069 PSMG3Q9BT73 122 aaPredicted RBP12.38□□□□□ -0.43
PKP3-209ENST00000533069 NBEAL2Q6ZNJ1 2754 aa12.38□□□□□ -0.43
PKP3-209ENST00000533069 SEC11BP0C7V7 166 aa12.37□□□□□ -0.43
PKP3-209ENST00000533069 IGLC1P0CG04 106 aa12.37□□□□□ -0.43
PKP3-209ENST00000533069 FGF7P21781 194 aa12.37□□□□□ -0.43
PKP3-209ENST00000533069 OR10J1P30954 320 aa12.37□□□□□ -0.43
PKP3-209ENST00000533069 YPEL3P61236 119 aaPredicted RBP12.37□□□□□ -0.43
PKP3-209ENST00000533069 SERF2P84101 59 aa12.37□□□□□ -0.43
PKP3-209ENST00000533069 TIGITQ495A1 244 aa12.37□□□□□ -0.43
PKP3-209ENST00000533069 TCF24Q7RTU0 167 aa12.37□□□□□ -0.43
PKP3-209ENST00000533069 ACY3Q96HD9 319 aa12.37□□□□□ -0.43
PKP3-209ENST00000533069 NARS2Q96I59 477 aaKnown RBP12.37□□□□□ -0.43
PKP3-209ENST00000533069 TRGV9Q99603 122 aa12.37□□□□□ -0.43
PKP3-209ENST00000533069 WFDC1Q9HC57 220 aa12.37□□□□□ -0.43
PKP3-209ENST00000533069 TRAV2A0A0B4J234 112 aa12.36□□□□□ -0.43
PKP3-209ENST00000533069 ZFP92A6NM28 416 aa12.36□□□□□ -0.43
PKP3-209ENST00000533069 APOHP02749 345 aaPredicted RBP12.36□□□□□ -0.43
PKP3-209ENST00000533069 CRYBB3P26998 211 aa12.36□□□□□ -0.43
PKP3-209ENST00000533069 Q8WTZ3 238 aa12.36□□□□□ -0.43
PKP3-209ENST00000533069 NPIPB3Q92617 1050 aa12.36□□□□□ -0.43
PKP3-209ENST00000533069 NPCDR1Q9BY65 106 aa12.36□□□□□ -0.43
PKP3-209ENST00000533069 KIR2DL5BA0A0G2JN68 375 aa12.35□□□□□ -0.43
PKP3-209ENST00000533069 KIR2DL5BA0A0G2JPC4 375 aa12.35□□□□□ -0.43
PKP3-209ENST00000533069 UBE2CO00762 179 aa12.35□□□□□ -0.43
PKP3-209ENST00000533069 IFNA7P01567 189 aa12.35□□□□□ -0.43
PKP3-209ENST00000533069 MBP02144 154 aa12.35□□□□□ -0.43
PKP3-209ENST00000533069 RPL29P47914 159 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms