RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 STXBP6Q8NFX7 210 aa14.72□□□□□ -0.05
CPSF1-209ENST00000532725 MAP6D1Q9H9H5 199 aa14.72□□□□□ -0.05
CPSF1-209ENST00000532725 LOC102724200A0A096LPH7 203 aaPredicted RBP14.71□□□□□ -0.05
CPSF1-209ENST00000532725 S100A11P31949 105 aa14.71□□□□□ -0.05
CPSF1-209ENST00000532725 NUP62P37198 522 aaPredicted RBP14.71□□□□□ -0.05
CPSF1-209ENST00000532725 SELENOTP62341 195 aa14.71□□□□□ -0.05
CPSF1-209ENST00000532725 ZNF124Q15973 351 aa14.71□□□□□ -0.05
CPSF1-209ENST00000532725 C1orf194Q5T5A4 169 aa14.71□□□□□ -0.05
CPSF1-209ENST00000532725 TMEM217Q8N7C4 229 aa14.71□□□□□ -0.05
CPSF1-209ENST00000532725 OR5AC2Q9NZP5 309 aa14.71□□□□□ -0.05
CPSF1-209ENST00000532725 SLC45A2Q9UMX9 530 aa14.71□□□□□ -0.05
CPSF1-209ENST00000532725 E5RGE8 158 aa14.7□□□□□ -0.06
CPSF1-209ENST00000532725 ORM2P19652 201 aa14.7□□□□□ -0.06
CPSF1-209ENST00000532725 PLP1P60201 277 aa14.7□□□□□ -0.06
CPSF1-209ENST00000532725 VWC2Q2TAL6 325 aa14.7□□□□□ -0.06
CPSF1-209ENST00000532725 LRRC37A5PQ49AS3 106 aa14.7□□□□□ -0.06
CPSF1-209ENST00000532725 SIGLEC15Q6ZMC9 328 aa14.7□□□□□ -0.06
CPSF1-209ENST00000532725 PPP1R1CQ8WVI7 109 aa14.7□□□□□ -0.06
CPSF1-209ENST00000532725 RCHY1Q96PM5 261 aa14.7□□□□□ -0.06
CPSF1-209ENST00000532725 RNF126Q9BV68 326 aa14.7□□□□□ -0.06
CPSF1-209ENST00000532725 GGTLC1Q9BX51 225 aa14.7□□□□□ -0.06
CPSF1-209ENST00000532725 DEFB131AP59861 70 aa14.69□□□□□ -0.06
CPSF1-209ENST00000532725 OR1B1Q8NGR6 318 aa14.69□□□□□ -0.06
CPSF1-209ENST00000532725 SPATA25Q9BR10 227 aa14.69□□□□□ -0.06
CPSF1-209ENST00000532725 ZNF98A6NK75 572 aa14.68□□□□□ -0.06
CPSF1-209ENST00000532725 AGPAT2O15120 278 aa14.68□□□□□ -0.06
CPSF1-209ENST00000532725 CXCL3P19876 107 aa14.68□□□□□ -0.06
CPSF1-209ENST00000532725 NHLH2Q02577 135 aa14.68□□□□□ -0.06
CPSF1-209ENST00000532725 STX12Q86Y82 276 aa14.68□□□□□ -0.06
CPSF1-209ENST00000532725 PPP1R14BQ96C90 147 aa14.68□□□□□ -0.06
CPSF1-209ENST00000532725 MGST2Q99735 147 aa14.68□□□□□ -0.06
CPSF1-209ENST00000532725 NRN1Q9NPD7 142 aa14.68□□□□□ -0.06
CPSF1-209ENST00000532725 UQCC1Q9NVA1 299 aa14.68□□□□□ -0.06
CPSF1-209ENST00000532725 FBXL17Q9UF56 701 aa14.68□□□□□ -0.06
CPSF1-209ENST00000532725 HYPMO75409 117 aa14.67□□□□□ -0.06
CPSF1-209ENST00000532725 MPC2O95563 127 aa14.67□□□□□ -0.06
CPSF1-209ENST00000532725 LINC00869P0C866 280 aa14.67□□□□□ -0.06
CPSF1-209ENST00000532725 HBG1P69891 147 aa14.67□□□□□ -0.06
CPSF1-209ENST00000532725 HBG2P69892 147 aa14.67□□□□□ -0.06
CPSF1-209ENST00000532725 ATP6V1FQ16864 119 aa14.67□□□□□ -0.06
CPSF1-209ENST00000532725 RGS21Q2M5E4 152 aa14.67□□□□□ -0.06
CPSF1-209ENST00000532725 OR8I2Q8N0Y5 310 aa14.67□□□□□ -0.06
CPSF1-209ENST00000532725 TMEM147Q9BVK8 224 aa14.67□□□□□ -0.06
CPSF1-209ENST00000532725 SLC25A31Q9H0C2 315 aa14.67□□□□□ -0.06
CPSF1-209ENST00000532725 WDR83OSQ9Y284 106 aa14.67□□□□□ -0.06
CPSF1-209ENST00000532725 LEMD1Q68G75 181 aa14.66□□□□□ -0.06
CPSF1-209ENST00000532725 PATE2Q6UY27 113 aa14.66□□□□□ -0.06
CPSF1-209ENST00000532725 WWC2-AS2Q96NR7 200 aa14.66□□□□□ -0.06
CPSF1-209ENST00000532725 SLC25A39Q9BZJ4 359 aaPredicted RBP14.66□□□□□ -0.06
CPSF1-209ENST00000532725 SEPSECSQ9HD40 501 aaKnown RBP14.66□□□□□ -0.06
CPSF1-209ENST00000532725 DOK5Q9P104 306 aa14.66□□□□□ -0.06
CPSF1-209ENST00000532725 KIR2DL5BA0A0G2JN68 375 aa14.65□□□□□ -0.06
CPSF1-209ENST00000532725 KIR2DL5BA0A0G2JPC4 375 aa14.65□□□□□ -0.06
CPSF1-209ENST00000532725 ZNF688P0C7X2 276 aa14.65□□□□□ -0.06
CPSF1-209ENST00000532725 RPL35AP18077 110 aaKnown RBP14.65□□□□□ -0.06
CPSF1-209ENST00000532725 EWSR1Q01844 656 aaKnown RBP eCLIP14.65□□□□□ -0.06
CPSF1-209ENST00000532725 OXA1LQ15070 435 aa14.65□□□□□ -0.06
CPSF1-209ENST00000532725 ZNF546Q86UE3 836 aa14.65□□□□□ -0.06
CPSF1-209ENST00000532725 KIR2DL5AQ8N109 375 aa14.65□□□□□ -0.06
CPSF1-209ENST00000532725 KIR2DL5BQ8NHK3 375 aa14.65□□□□□ -0.06
CPSF1-209ENST00000532725 C17orf77Q96MU5 243 aa14.65□□□□□ -0.06
CPSF1-209ENST00000532725 RETNQ9HD89 108 aa14.65□□□□□ -0.06
CPSF1-209ENST00000532725 HIGD1AQ9Y241 93 aa14.65□□□□□ -0.06
CPSF1-209ENST00000532725 H3BRN7 92 aa14.64□□□□□ -0.07
CPSF1-209ENST00000532725 S100A7P31151 101 aa14.64□□□□□ -0.07
CPSF1-209ENST00000532725 CAMLGP49069 296 aa14.64□□□□□ -0.07
CPSF1-209ENST00000532725 RAB31Q13636 194 aa14.64□□□□□ -0.07
CPSF1-209ENST00000532725 FCN2Q15485 313 aa14.64□□□□□ -0.07
CPSF1-209ENST00000532725 PXDC1Q5TGL8 231 aa14.64□□□□□ -0.07
CPSF1-209ENST00000532725 OR11H7Q8NGC8 314 aa14.64□□□□□ -0.07
CPSF1-209ENST00000532725 CHAC2Q8WUX2 184 aa14.64□□□□□ -0.07
CPSF1-209ENST00000532725 SHANK2-AS3Q9BTD1 123 aa14.64□□□□□ -0.07
CPSF1-209ENST00000532725 ARL6Q9H0F7 186 aa14.64□□□□□ -0.07
CPSF1-209ENST00000532725 MED28Q9H204 178 aa14.64□□□□□ -0.07
CPSF1-209ENST00000532725 SLC25A32Q9H2D1 315 aa14.64□□□□□ -0.07
CPSF1-209ENST00000532725 SLC25A22Q9H936 323 aa14.64□□□□□ -0.07
CPSF1-209ENST00000532725 UBE2CO00762 179 aa14.63□□□□□ -0.07
CPSF1-209ENST00000532725 OR5G3P0C626 314 aa14.63□□□□□ -0.07
CPSF1-209ENST00000532725 APOC4P55056 127 aa14.63□□□□□ -0.07
CPSF1-209ENST00000532725 RAP2BP61225 183 aa14.63□□□□□ -0.07
CPSF1-209ENST00000532725 OR5C1Q8NGR4 320 aa14.63□□□□□ -0.07
CPSF1-209ENST00000532725 SCRT1Q9BWW7 348 aa14.63□□□□□ -0.07
CPSF1-209ENST00000532725 SOCS3O14543 225 aa14.62□□□□□ -0.07
CPSF1-209ENST00000532725 PET100P0DJ07 73 aa14.62□□□□□ -0.07
CPSF1-209ENST00000532725 SNRPD3P62318 126 aaKnown RBP14.62□□□□□ -0.07
CPSF1-209ENST00000532725 PRR20EP86478 221 aa14.62□□□□□ -0.07
CPSF1-209ENST00000532725 PRR20CP86479 221 aa14.62□□□□□ -0.07
CPSF1-209ENST00000532725 PRR20DP86480 221 aa14.62□□□□□ -0.07
CPSF1-209ENST00000532725 PRR20BP86481 221 aa14.62□□□□□ -0.07
CPSF1-209ENST00000532725 PRR20AP86496 221 aa14.62□□□□□ -0.07
CPSF1-209ENST00000532725 BAXQ07812 192 aa14.62□□□□□ -0.07
CPSF1-209ENST00000532725 PSMG4Q5JS54 123 aa14.62□□□□□ -0.07
CPSF1-209ENST00000532725 TMEM37Q8WXS4 190 aa14.62□□□□□ -0.07
CPSF1-209ENST00000532725 GPR82Q96P67 336 aa14.62□□□□□ -0.07
CPSF1-209ENST00000532725 UHRF2Q96PU4 802 aa14.62□□□□□ -0.07
CPSF1-209ENST00000532725 OVOL2Q9BRP0 275 aa14.62□□□□□ -0.07
CPSF1-209ENST00000532725 RSG1Q9BU20 258 aa14.62□□□□□ -0.07
CPSF1-209ENST00000532725 CSTL1Q9H114 145 aa14.62□□□□□ -0.07
CPSF1-209ENST00000532725 ARV1Q9H2C2 271 aa14.62□□□□□ -0.07
CPSF1-209ENST00000532725 UBE2L5PA0A1B0GUS4 154 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms