RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 NEU1Q99519 415 aa11.34□□□□□ -0.59
CPSF1-205ENST00000531042 V9GYH0 126 aa11.34□□□□□ -0.59
CPSF1-205ENST00000531042 ZNF705FA8MVS1 300 aaPredicted RBP11.33□□□□□ -0.6
CPSF1-205ENST00000531042 MED6O75586 246 aa11.33□□□□□ -0.6
CPSF1-205ENST00000531042 IGKV3-20P01619 116 aa11.33□□□□□ -0.6
CPSF1-205ENST00000531042 ZNF705DP0CH99 300 aaPredicted RBP11.33□□□□□ -0.6
CPSF1-205ENST00000531042 ZNF705BP0CI00 300 aaPredicted RBP11.33□□□□□ -0.6
CPSF1-205ENST00000531042 FOXI2Q6ZQN5 318 aa11.33□□□□□ -0.6
CPSF1-205ENST00000531042 CLUHP3Q96NS8 147 aa11.33□□□□□ -0.6
CPSF1-205ENST00000531042 SLC25A21Q9BQT8 299 aaPredicted RBP11.33□□□□□ -0.6
CPSF1-205ENST00000531042 PAIP2BQ9ULR5 123 aaKnown RBP11.33□□□□□ -0.6
CPSF1-205ENST00000531042 TMED3Q9Y3Q3 217 aa11.33□□□□□ -0.6
CPSF1-205ENST00000531042 SFT2D2O95562 160 aa11.32□□□□□ -0.6
CPSF1-205ENST00000531042 AMBPP02760 352 aa11.32□□□□□ -0.6
CPSF1-205ENST00000531042 FXYD7P58549 80 aa11.32□□□□□ -0.6
CPSF1-205ENST00000531042 PPP1R1AQ13522 171 aa11.32□□□□□ -0.6
CPSF1-205ENST00000531042 ZNF79Q15937 498 aa11.32□□□□□ -0.6
CPSF1-205ENST00000531042 GSG1LQ6UXU4 331 aa11.32□□□□□ -0.6
CPSF1-205ENST00000531042 OR8I2Q8N0Y5 310 aa11.32□□□□□ -0.6
CPSF1-205ENST00000531042 COQ8AQ8NI60 647 aa11.32□□□□□ -0.6
CPSF1-205ENST00000531042 DEDD2Q8WXF8 326 aa11.32□□□□□ -0.6
CPSF1-205ENST00000531042 PPP1R14BQ96C90 147 aa11.32□□□□□ -0.6
CPSF1-205ENST00000531042 CIB3Q96Q77 187 aaPredicted RBP11.32□□□□□ -0.6
CPSF1-205ENST00000531042 HERC2O95714 4834 aa11.31□□□□□ -0.6
CPSF1-205ENST00000531042 SMIM9A6NGZ8 99 aa11.31□□□□□ -0.6
CPSF1-205ENST00000531042 PRSS46E5RG02 174 aa11.31□□□□□ -0.6
CPSF1-205ENST00000531042 WRBO00258 174 aa11.31□□□□□ -0.6
CPSF1-205ENST00000531042 ISLRO14498 428 aa11.31□□□□□ -0.6
CPSF1-205ENST00000531042 SYNGR2O43760 224 aa11.31□□□□□ -0.6
CPSF1-205ENST00000531042 RPP30P78346 268 aaKnown RBP11.31□□□□□ -0.6
CPSF1-205ENST00000531042 SPATA31B1PQ5VZV4 182 aa11.31□□□□□ -0.6
CPSF1-205ENST00000531042 ZNF709Q8N972 641 aa11.31□□□□□ -0.6
CPSF1-205ENST00000531042 OR4B1Q8NGF8 309 aa11.31□□□□□ -0.6
CPSF1-205ENST00000531042 SCRT1Q9BWW7 348 aa11.31□□□□□ -0.6
CPSF1-205ENST00000531042 MAGT1Q9H0U3 335 aa11.31□□□□□ -0.6
CPSF1-205ENST00000531042 TMEM189A5PLL7 270 aa11.3□□□□□ -0.6
CPSF1-205ENST00000531042 CFDP00746 253 aaPredicted RBP11.3□□□□□ -0.6
CPSF1-205ENST00000531042 HOXB5P09067 269 aa11.3□□□□□ -0.6
CPSF1-205ENST00000531042 PAX9P55771 341 aa11.3□□□□□ -0.6
CPSF1-205ENST00000531042 GGNBP1Q5YKI7 109 aa11.3□□□□□ -0.6
CPSF1-205ENST00000531042 IGHV3OR16-12A0A075B7B8 117 aa11.29□□□□□ -0.6
CPSF1-205ENST00000531042 F6UB75 175 aa11.29□□□□□ -0.6
CPSF1-205ENST00000531042 SPART-AS1P0CW21 52 aa11.29□□□□□ -0.6
CPSF1-205ENST00000531042 S100A5P33763 92 aa11.29□□□□□ -0.6
CPSF1-205ENST00000531042 EMP1P54849 157 aa11.29□□□□□ -0.6
CPSF1-205ENST00000531042 PSG9Q00887 426 aa11.29□□□□□ -0.6
CPSF1-205ENST00000531042 FAM78BQ5VT40 261 aa11.29□□□□□ -0.6
CPSF1-205ENST00000531042 SAMD13Q5VXD3 122 aa11.29□□□□□ -0.6
CPSF1-205ENST00000531042 EBLN2Q6P2I7 272 aa11.29□□□□□ -0.6
CPSF1-205ENST00000531042 CCDC190Q86UF4 302 aa11.29□□□□□ -0.6
CPSF1-205ENST00000531042 NDUFAF3Q9BU61 184 aa11.29□□□□□ -0.6
CPSF1-205ENST00000531042 SLC35B3Q9H1N7 401 aa11.29□□□□□ -0.6
CPSF1-205ENST00000531042 SLC45A2Q9UMX9 530 aa11.29□□□□□ -0.6
CPSF1-205ENST00000531042 RFNGQ9Y644 331 aa11.29□□□□□ -0.6
CPSF1-205ENST00000531042 A0A0J9YX75 114 aa11.28□□□□□ -0.6
CPSF1-205ENST00000531042 ZNF98A6NK75 572 aa11.28□□□□□ -0.6
CPSF1-205ENST00000531042 P0DMU3 169 aa11.28□□□□□ -0.6
CPSF1-205ENST00000531042 FAM231AP0DMU4 169 aa11.28□□□□□ -0.6
CPSF1-205ENST00000531042 FAM231CP0DMU5 169 aa11.28□□□□□ -0.6
CPSF1-205ENST00000531042 GALR1P47211 349 aa11.28□□□□□ -0.6
CPSF1-205ENST00000531042 MEOX2P50222 304 aa11.28□□□□□ -0.6
CPSF1-205ENST00000531042 SPANXN5Q5MJ07 72 aa11.28□□□□□ -0.6
CPSF1-205ENST00000531042 TMEM182Q6ZP80 229 aaPredicted RBP11.28□□□□□ -0.6
CPSF1-205ENST00000531042 C16orf92Q96LL3 132 aa11.28□□□□□ -0.6
CPSF1-205ENST00000531042 C20orf173Q96LM9 149 aa11.28□□□□□ -0.6
CPSF1-205ENST00000531042 C17orf77Q96MU5 243 aa11.28□□□□□ -0.6
CPSF1-205ENST00000531042 SLC25A32Q9H2D1 315 aa11.28□□□□□ -0.6
CPSF1-205ENST00000531042 SLC25A22Q9H936 323 aa11.28□□□□□ -0.6
CPSF1-205ENST00000531042 RPRMQ9NS64 109 aa11.28□□□□□ -0.6
CPSF1-205ENST00000531042 H3BP45 60 aa11.27□□□□□ -0.61
CPSF1-205ENST00000531042 GATA2P23769 480 aaPredicted RBP11.27□□□□□ -0.61
CPSF1-205ENST00000531042 UBE2MP61081 183 aaKnown RBP11.27□□□□□ -0.61
CPSF1-205ENST00000531042 C1orf158Q8N1D5 194 aa11.27□□□□□ -0.61
CPSF1-205ENST00000531042 POM121L12Q8N7R1 296 aa11.27□□□□□ -0.61
CPSF1-205ENST00000531042 BPIFCQ8NFQ6 507 aa11.27□□□□□ -0.61
CPSF1-205ENST00000531042 OR4D5Q8NGN0 318 aa11.27□□□□□ -0.61
CPSF1-205ENST00000531042 RSG1Q9BU20 258 aa11.27□□□□□ -0.61
CPSF1-205ENST00000531042 DKK2Q9UBU2 259 aa11.27□□□□□ -0.61
CPSF1-205ENST00000531042 GOLT1BQ9Y3E0 138 aa11.27□□□□□ -0.61
CPSF1-205ENST00000531042 STRAPQ9Y3F4 350 aaKnown RBP11.27□□□□□ -0.61
CPSF1-205ENST00000531042 A8MTW9 85 aa11.26□□□□□ -0.61
CPSF1-205ENST00000531042 ORM2P19652 201 aa11.26□□□□□ -0.61
CPSF1-205ENST00000531042 ID3Q02535 119 aa11.26□□□□□ -0.61
CPSF1-205ENST00000531042 FAM222AQ5U5X8 452 aa11.26□□□□□ -0.61
CPSF1-205ENST00000531042 S100ZQ8WXG8 99 aa11.26□□□□□ -0.61
CPSF1-205ENST00000531042 DOK5Q9P104 306 aa11.26□□□□□ -0.61
CPSF1-205ENST00000531042 TEX48A0A1B0GUV7 120 aa11.25□□□□□ -0.61
CPSF1-205ENST00000531042 C9orf170A2RU37 121 aa11.25□□□□□ -0.61
CPSF1-205ENST00000531042 ADAP1O75689 374 aa11.25□□□□□ -0.61
CPSF1-205ENST00000531042 AKR1C1Q04828 323 aa11.25□□□□□ -0.61
CPSF1-205ENST00000531042 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.25□□□□□ -0.61
CPSF1-205ENST00000531042 ACOT7LQ6ZUV0 252 aa11.25□□□□□ -0.61
CPSF1-205ENST00000531042 TMEM144Q7Z5S9 345 aa11.25□□□□□ -0.61
CPSF1-205ENST00000531042 OR1B1Q8NGR6 318 aa11.25□□□□□ -0.61
CPSF1-205ENST00000531042 GPR82Q96P67 336 aa11.25□□□□□ -0.61
CPSF1-205ENST00000531042 C7orf50Q9BRJ6 194 aaKnown RBP11.25□□□□□ -0.61
CPSF1-205ENST00000531042 NIPSNAP3BQ9BS92 247 aa11.25□□□□□ -0.61
CPSF1-205ENST00000531042 TMEM147Q9BVK8 224 aa11.25□□□□□ -0.61
CPSF1-205ENST00000531042 SRRQ9GZT4 340 aa11.25□□□□□ -0.61
CPSF1-205ENST00000531042 DNAH2Q9P225 4427 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms