RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 A0A1W2PS18 150 aa16.01■□□□□ 0.15
CAPN1-220ENST00000530567 TSPAN4O14817 238 aa16.01■□□□□ 0.15
CAPN1-220ENST00000530567 MPDU1O75352 247 aa16.01■□□□□ 0.15
CAPN1-220ENST00000530567 DFFBO76075 338 aa16.01■□□□□ 0.15
CAPN1-220ENST00000530567 ORM2P19652 201 aa16.01■□□□□ 0.15
CAPN1-220ENST00000530567 RAB31Q13636 194 aa16.01■□□□□ 0.15
CAPN1-220ENST00000530567 MIC13Q5XKP0 118 aa16.01■□□□□ 0.15
CAPN1-220ENST00000530567 C16orf54Q6UWD8 224 aa16.01■□□□□ 0.15
CAPN1-220ENST00000530567 OR11H4Q8NGC9 324 aa16.01■□□□□ 0.15
CAPN1-220ENST00000530567 OR1B1Q8NGR6 318 aa16.01■□□□□ 0.15
CAPN1-220ENST00000530567 NPCDR1Q9BY65 106 aa16.01■□□□□ 0.15
CAPN1-220ENST00000530567 TMEM231Q9H6L2 316 aa16.01■□□□□ 0.15
CAPN1-220ENST00000530567 DOK5Q9P104 306 aa16.01■□□□□ 0.15
CAPN1-220ENST00000530567 TCF24Q7RTU0 167 aa16■□□□□ 0.15
CAPN1-220ENST00000530567 NARS2Q96I59 477 aaKnown RBP16■□□□□ 0.15
CAPN1-220ENST00000530567 K7EIL1 84 aa15.99■□□□□ 0.15
CAPN1-220ENST00000530567 NUP62P37198 522 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-220ENST00000530567 RPL29P47914 159 aaKnown RBP15.99■□□□□ 0.15
CAPN1-220ENST00000530567 GUCA2BQ16661 112 aa15.99■□□□□ 0.15
CAPN1-220ENST00000530567 PATE2Q6UY27 113 aa15.99■□□□□ 0.15
CAPN1-220ENST00000530567 RBPMS2Q6ZRY4 209 aaKnown RBP15.99■□□□□ 0.15
CAPN1-220ENST00000530567 INO80EQ8NBZ0 244 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-220ENST00000530567 ARL6Q9H0F7 186 aa15.99■□□□□ 0.15
CAPN1-220ENST00000530567 ARPC5O15511 151 aa15.98■□□□□ 0.15
CAPN1-220ENST00000530567 HYPMO75409 117 aa15.98■□□□□ 0.15
CAPN1-220ENST00000530567 LAMTOR1Q6IAA8 161 aa15.98■□□□□ 0.15
CAPN1-220ENST00000530567 TCTE3Q8IZS6 198 aa15.98■□□□□ 0.15
CAPN1-220ENST00000530567 GRAMD2BQ96HH9 432 aa15.98■□□□□ 0.15
CAPN1-220ENST00000530567 SPAG8Q99932 426 aaPredicted RBP15.98■□□□□ 0.15
CAPN1-220ENST00000530567 NEURL2Q9BR09 285 aa15.98■□□□□ 0.15
CAPN1-220ENST00000530567 H3BRN7 92 aa15.97■□□□□ 0.15
CAPN1-220ENST00000530567 B2MP61769 119 aa15.97■□□□□ 0.15
CAPN1-220ENST00000530567 PXDC1Q5TGL8 231 aa15.97■□□□□ 0.15
CAPN1-220ENST00000530567 UHRF2Q96PU4 802 aa15.97■□□□□ 0.15
CAPN1-220ENST00000530567 PARD6GQ9BYG4 376 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-220ENST00000530567 SLC39A9Q9NUM3 307 aa15.97■□□□□ 0.15
CAPN1-220ENST00000530567 PXMP4Q9Y6I8 212 aa15.97■□□□□ 0.15
CAPN1-220ENST00000530567 CD5P06127 495 aa15.96■□□□□ 0.15
CAPN1-220ENST00000530567 Q8N1Y9 231 aa15.96■□□□□ 0.15
CAPN1-220ENST00000530567 TMEM37Q8WXS4 190 aa15.96■□□□□ 0.15
CAPN1-220ENST00000530567 RSG1Q9BU20 258 aa15.96■□□□□ 0.15
CAPN1-220ENST00000530567 SCRT1Q9BWW7 348 aa15.96■□□□□ 0.15
CAPN1-220ENST00000530567 SLC25A39Q9BZJ4 359 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-220ENST00000530567 ARV1Q9H2C2 271 aa15.96■□□□□ 0.15
CAPN1-220ENST00000530567 HIGD1AQ9Y241 93 aa15.96■□□□□ 0.15
CAPN1-220ENST00000530567 IGKV3-7A0A075B6H7 116 aa15.95■□□□□ 0.14
CAPN1-220ENST00000530567 ZNF98A6NK75 572 aa15.95■□□□□ 0.14
CAPN1-220ENST00000530567 IFNA5P01569 189 aa15.95■□□□□ 0.14
CAPN1-220ENST00000530567 CD7P09564 240 aa15.95■□□□□ 0.14
CAPN1-220ENST00000530567 OR5G3P0C626 314 aa15.95■□□□□ 0.14
CAPN1-220ENST00000530567 AP2S1P53680 142 aaPredicted RBP15.95■□□□□ 0.14
CAPN1-220ENST00000530567 C1orf194Q5T5A4 169 aa15.95■□□□□ 0.14
CAPN1-220ENST00000530567 PPP1R14BQ96C90 147 aa15.95■□□□□ 0.14
CAPN1-220ENST00000530567 SHANK2-AS3Q9BTD1 123 aa15.95■□□□□ 0.14
CAPN1-220ENST00000530567 PFDN2Q9UHV9 154 aa15.95■□□□□ 0.14
CAPN1-220ENST00000530567 HMSDA8MTL9 139 aa15.94■□□□□ 0.14
CAPN1-220ENST00000530567 LEMD1Q68G75 181 aa15.94■□□□□ 0.14
CAPN1-220ENST00000530567 GBGT1Q8N5D6 347 aa15.94■□□□□ 0.14
CAPN1-220ENST00000530567 MFFQ9GZY8 342 aa15.94■□□□□ 0.14
CAPN1-220ENST00000530567 SLC25A32Q9H2D1 315 aa15.94■□□□□ 0.14
CAPN1-220ENST00000530567 MS4A6AQ9H2W1 248 aa15.94■□□□□ 0.14
CAPN1-220ENST00000530567 HELTA6NFD8 242 aa15.94■□□□□ 0.14
CAPN1-220ENST00000530567 CD300CQ08708 224 aa15.94■□□□□ 0.14
CAPN1-220ENST00000530567 SIGLEC15Q6ZMC9 328 aa15.94■□□□□ 0.14
CAPN1-220ENST00000530567 Q6ZRG5 221 aa15.94■□□□□ 0.14
CAPN1-220ENST00000530567 AKAP14Q86UN6 197 aa15.94■□□□□ 0.14
CAPN1-220ENST00000530567 C19orf73Q9NVV2 129 aa15.94■□□□□ 0.14
CAPN1-220ENST00000530567 RFNGQ9Y644 331 aa15.94■□□□□ 0.14
CAPN1-220ENST00000530567 COX7A2P2O60397 106 aa15.93■□□□□ 0.14
CAPN1-220ENST00000530567 CD81P60033 236 aa15.93■□□□□ 0.14
CAPN1-220ENST00000530567 RPL11P62913 178 aaKnown RBP15.93■□□□□ 0.14
CAPN1-220ENST00000530567 ZNF266Q14584 549 aa15.93■□□□□ 0.14
CAPN1-220ENST00000530567 GCSAMLQ5JQS6 135 aa15.93■□□□□ 0.14
CAPN1-220ENST00000530567 MORN5Q5VZ52 161 aa15.93■□□□□ 0.14
CAPN1-220ENST00000530567 GTSCR1Q86UQ5 136 aa15.93■□□□□ 0.14
CAPN1-220ENST00000530567 SCGB1C1Q8TD33 95 aa15.93■□□□□ 0.14
CAPN1-220ENST00000530567 PRKDCP78527 4128 aaKnown RBP15.92■□□□□ 0.14
CAPN1-220ENST00000530567 ELOA3CA0A087WX78 387 aaPredicted RBP15.92■□□□□ 0.14
CAPN1-220ENST00000530567 OR4C46A6NHA9 309 aa15.92■□□□□ 0.14
CAPN1-220ENST00000530567 TFPI2P48307 235 aa15.92■□□□□ 0.14
CAPN1-220ENST00000530567 ZNF345Q14585 488 aa15.92■□□□□ 0.14
CAPN1-220ENST00000530567 C10orf113Q5VZT2 155 aa15.92■□□□□ 0.14
CAPN1-220ENST00000530567 LINC00305Q7Z4B0 112 aa15.92■□□□□ 0.14
CAPN1-220ENST00000530567 OR8I2Q8N0Y5 310 aa15.92■□□□□ 0.14
CAPN1-220ENST00000530567 ZNF709Q8N972 641 aa15.92■□□□□ 0.14
CAPN1-220ENST00000530567 DCANP1Q8TF63 244 aa15.92■□□□□ 0.14
CAPN1-220ENST00000530567 SLC25A22Q9H936 323 aa15.92■□□□□ 0.14
CAPN1-220ENST00000530567 DNAJC4Q9NNZ3 241 aa15.92■□□□□ 0.14
CAPN1-220ENST00000530567 KCNIP2Q9NS61 270 aa15.92■□□□□ 0.14
CAPN1-220ENST00000530567 TRAV2A0A0B4J234 112 aa15.91■□□□□ 0.14
CAPN1-220ENST00000530567 C17orf112F2Z3M2 114 aa15.91■□□□□ 0.14
CAPN1-220ENST00000530567 CXCL2P19875 107 aa15.91■□□□□ 0.14
CAPN1-220ENST00000530567 ODF3L2Q3SX64 289 aa15.91■□□□□ 0.14
CAPN1-220ENST00000530567 RPL7L1Q6DKI1 246 aaKnown RBP15.91■□□□□ 0.14
CAPN1-220ENST00000530567 KCNRGQ8N5I3 272 aa15.91■□□□□ 0.14
CAPN1-220ENST00000530567 FAM24BQ8N5W8 94 aa15.91■□□□□ 0.14
CAPN1-220ENST00000530567 STXBP6Q8NFX7 210 aa15.91■□□□□ 0.14
CAPN1-220ENST00000530567 OR1L4Q8NGR5 311 aa15.91■□□□□ 0.14
CAPN1-220ENST00000530567 C17orf77Q96MU5 243 aa15.91■□□□□ 0.14
CAPN1-220ENST00000530567 WFDC10AQ9H1F0 79 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms