RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 ZNF418Q8TF45 676 aaPredicted RBP9.33□□□□□ -0.92
USF1-208ENST00000528768 EAF1Q96JC9 268 aaPredicted RBP9.33□□□□□ -0.92
USF1-208ENST00000528768 JMJD8Q96S16 334 aa9.33□□□□□ -0.92
USF1-208ENST00000528768 RASL11BQ9BPW5 248 aa9.33□□□□□ -0.92
USF1-208ENST00000528768 CHRDL1Q9BU40 450 aa9.33□□□□□ -0.92
USF1-208ENST00000528768 SLC25A2Q9BXI2 301 aa9.33□□□□□ -0.92
USF1-208ENST00000528768 LPAR2Q9HBW0 351 aa9.33□□□□□ -0.92
USF1-208ENST00000528768 THYN1Q9P016 225 aa9.33□□□□□ -0.92
USF1-208ENST00000528768 PITPNC1Q9UKF7 332 aa9.33□□□□□ -0.92
USF1-208ENST00000528768 IGKV1D-37A0A075B6S9 117 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 HIST1H2BKO60814 126 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 HIST1H2BJP06899 126 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 OR10J4P0C629 311 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 FAM106CPP0CH98 169 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 ORM2P19652 201 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 HIST1H2BOP23527 126 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 HIST1H2BBP33778 126 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 HIST1H2BDP58876 126 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 HIST1H2BCP62807 126 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 S100A12P80511 92 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 FXYD3Q14802 87 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 HIST2H2BEQ16778 126 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 C5orf64Q2M2E5 130 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.32□□□□□ -0.92
USF1-208ENST00000528768 TEX38Q6PEX7 206 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 LINC00305Q7Z4B0 112 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 OR1B1Q8NGR6 318 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 CFHR4Q92496 578 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 HIST1H2BHQ93079 126 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 FAM167A-AS1Q96KT0 104 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 HIST1H2BNQ99877 126 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 HIST1H2BMQ99879 126 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 DERL1Q9BUN8 251 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 WNT10AQ9GZT5 417 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 GAR1Q9NY12 217 aaKnown RBP9.32□□□□□ -0.92
USF1-208ENST00000528768 IL36BQ9NZH7 164 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 HIGD1AQ9Y241 93 aa9.32□□□□□ -0.92
USF1-208ENST00000528768 IGHV2-70DA0A0C4DH43 119 aa9.31□□□□□ -0.92
USF1-208ENST00000528768 A0A0U1RQK1 487 aa9.31□□□□□ -0.92
USF1-208ENST00000528768 ZNF320A2RRD8 509 aa9.31□□□□□ -0.92
USF1-208ENST00000528768 TOX4O94842 621 aa9.31□□□□□ -0.92
USF1-208ENST00000528768 DLX1P56177 255 aa9.31□□□□□ -0.92
USF1-208ENST00000528768 ERVFC1-1P60608 527 aa9.31□□□□□ -0.92
USF1-208ENST00000528768 ZNF90Q03938 601 aa9.31□□□□□ -0.92
USF1-208ENST00000528768 RPEL1Q2QD12 228 aa9.31□□□□□ -0.92
USF1-208ENST00000528768 CENPWQ5EE01 88 aa9.31□□□□□ -0.92
USF1-208ENST00000528768 TEX29Q8N6K0 151 aa9.31□□□□□ -0.92
USF1-208ENST00000528768 FRZBQ92765 325 aa9.31□□□□□ -0.92
USF1-208ENST00000528768 ZNF503Q96F45 646 aa9.31□□□□□ -0.92
USF1-208ENST00000528768 OSTCQ9NRP0 149 aa9.31□□□□□ -0.92
USF1-208ENST00000528768 IGHV4-61A0A0C4DH41 118 aa9.3□□□□□ -0.92
USF1-208ENST00000528768 NPIPB5A8MRT5 1133 aa9.3□□□□□ -0.92
USF1-208ENST00000528768 TMEM11P17152 192 aa9.3□□□□□ -0.92
USF1-208ENST00000528768 UBE2E1P51965 193 aa9.3□□□□□ -0.92
USF1-208ENST00000528768 PRB3Q04118 309 aaPredicted RBP9.3□□□□□ -0.92
USF1-208ENST00000528768 KLRD1Q13241 179 aa9.3□□□□□ -0.92
USF1-208ENST00000528768 EBI3Q14213 229 aa9.3□□□□□ -0.92
USF1-208ENST00000528768 SHISA2Q6UWI4 295 aa9.3□□□□□ -0.92
USF1-208ENST00000528768 ZNF562Q6V9R5 426 aa9.3□□□□□ -0.92
USF1-208ENST00000528768 LINC01356Q8N9X3 169 aa9.3□□□□□ -0.92
USF1-208ENST00000528768 SMIM12Q96EX1 92 aa9.3□□□□□ -0.92
USF1-208ENST00000528768 SIRPDQ9H106 197 aa9.3□□□□□ -0.92
USF1-208ENST00000528768 TRBV9A0A0B4J1U6 114 aa9.29□□□□□ -0.92
USF1-208ENST00000528768 TRAV5A0A0B4J249 113 aa9.29□□□□□ -0.92
USF1-208ENST00000528768 NCBP2LA6PVI3 153 aaKnown RBP9.29□□□□□ -0.92
USF1-208ENST00000528768 GGTLC3B5MD39 225 aa9.29□□□□□ -0.92
USF1-208ENST00000528768 I3L2K1 104 aa9.29□□□□□ -0.92
USF1-208ENST00000528768 FCN1O00602 326 aa9.29□□□□□ -0.92
USF1-208ENST00000528768 ISLRO14498 428 aa9.29□□□□□ -0.92
USF1-208ENST00000528768 IGHV3-48P01763 117 aa9.29□□□□□ -0.92
USF1-208ENST00000528768 RD3LP0DJH9 198 aa9.29□□□□□ -0.92
USF1-208ENST00000528768 HIST1H1BP16401 226 aaKnown RBP9.29□□□□□ -0.92
USF1-208ENST00000528768 MFAP2P55001 183 aa9.29□□□□□ -0.92
USF1-208ENST00000528768 MFAP4P55083 255 aa9.29□□□□□ -0.92
USF1-208ENST00000528768 UBE2G1P62253 170 aa9.29□□□□□ -0.92
USF1-208ENST00000528768 SSBP2P81877 361 aaPredicted RBP9.29□□□□□ -0.92
USF1-208ENST00000528768 ACTL10Q5JWF8 245 aa9.29□□□□□ -0.92
USF1-208ENST00000528768 PATE2Q6UY27 113 aa9.29□□□□□ -0.92
USF1-208ENST00000528768 ARPC1AQ92747 370 aa9.29□□□□□ -0.92
USF1-208ENST00000528768 ZNF747Q9BV97 191 aa9.29□□□□□ -0.92
USF1-208ENST00000528768 ELOVL1Q9BW60 279 aa9.29□□□□□ -0.92
USF1-208ENST00000528768 TMEM14CQ9P0S9 112 aa9.29□□□□□ -0.92
USF1-208ENST00000528768 TRAPPC1Q9Y5R8 145 aa9.29□□□□□ -0.92
USF1-208ENST00000528768 TRBV20OR9-2A0A075B6H5 130 aa9.28□□□□□ -0.92
USF1-208ENST00000528768 PEX7O00628 323 aa9.28□□□□□ -0.92
USF1-208ENST00000528768 GCGP01275 180 aa9.28□□□□□ -0.92
USF1-208ENST00000528768 NBEAP1P0C6P0 100 aa9.28□□□□□ -0.92
USF1-208ENST00000528768 IGLC1P0CG04 106 aa9.28□□□□□ -0.92
USF1-208ENST00000528768 HILS1P60008 231 aa9.28□□□□□ -0.92
USF1-208ENST00000528768 LYZP61626 148 aa9.28□□□□□ -0.92
USF1-208ENST00000528768 WDR73Q6P4I2 378 aa9.28□□□□□ -0.92
USF1-208ENST00000528768 LHFPL4Q7Z7J7 247 aa9.28□□□□□ -0.92
USF1-208ENST00000528768 ZNF329Q86UD4 541 aa9.28□□□□□ -0.92
USF1-208ENST00000528768 FXYD5Q96DB9 178 aa9.28□□□□□ -0.92
USF1-208ENST00000528768 TMEM68Q96MH6 324 aa9.28□□□□□ -0.92
USF1-208ENST00000528768 ZNF48Q96MX3 618 aaPredicted RBP9.28□□□□□ -0.92
USF1-208ENST00000528768 RBM14Q96PK6 669 aaKnown RBP9.28□□□□□ -0.92
USF1-208ENST00000528768 AURKAIP1Q9NWT8 199 aaPredicted RBP9.28□□□□□ -0.92
USF1-208ENST00000528768 MRPL36Q9P0J6 103 aaKnown RBP9.28□□□□□ -0.92
USF1-208ENST00000528768 TNCP24821 2201 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms