RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 RHBDL2Q9NX52 303 aa9.28□□□□□ -0.92
NKX3-1-202ENST00000523261 LY96Q9Y6Y9 160 aa9.28□□□□□ -0.92
NKX3-1-202ENST00000523261 MEIS3P1A6NDR6 274 aa9.27□□□□□ -0.93
NKX3-1-202ENST00000523261 ZNF98A6NK75 572 aa9.27□□□□□ -0.93
NKX3-1-202ENST00000523261 K7EP13 123 aa9.27□□□□□ -0.93
NKX3-1-202ENST00000523261 MEOX2P50222 304 aa9.27□□□□□ -0.93
NKX3-1-202ENST00000523261 TAS2R20P59543 309 aa9.27□□□□□ -0.93
NKX3-1-202ENST00000523261 SCXQ7RTU7 201 aa9.27□□□□□ -0.93
NKX3-1-202ENST00000523261 ACY3Q96HD9 319 aa9.27□□□□□ -0.93
NKX3-1-202ENST00000523261 MGLLQ99685 303 aa9.27□□□□□ -0.93
NKX3-1-202ENST00000523261 PDCD10Q9BUL8 212 aa9.27□□□□□ -0.93
NKX3-1-202ENST00000523261 RRP15Q9Y3B9 282 aaKnown RBP9.27□□□□□ -0.93
NKX3-1-202ENST00000523261 KRTAP9-6A0A140TA67 174 aa9.26□□□□□ -0.93
NKX3-1-202ENST00000523261 NOTOA8MTQ0 251 aa9.26□□□□□ -0.93
NKX3-1-202ENST00000523261 RLN2P04090 185 aa9.26□□□□□ -0.93
NKX3-1-202ENST00000523261 HTR2BP41595 481 aa9.26□□□□□ -0.93
NKX3-1-202ENST00000523261 CBX5P45973 191 aa9.26□□□□□ -0.93
NKX3-1-202ENST00000523261 C10orf67Q8IYJ2 551 aa9.26□□□□□ -0.93
NKX3-1-202ENST00000523261 RNASEH2CQ8TDP1 164 aaKnown RBP9.26□□□□□ -0.93
NKX3-1-202ENST00000523261 AUNIPQ9H7T9 357 aa9.26□□□□□ -0.93
NKX3-1-202ENST00000523261 RS1O15537 224 aa9.25□□□□□ -0.93
NKX3-1-202ENST00000523261 PMP2P02689 132 aa9.25□□□□□ -0.93
NKX3-1-202ENST00000523261 C2orf83Q53S99 150 aa9.25□□□□□ -0.93
NKX3-1-202ENST00000523261 OR8I2Q8N0Y5 310 aa9.25□□□□□ -0.93
NKX3-1-202ENST00000523261 SLC25A38Q96DW6 304 aa9.25□□□□□ -0.93
NKX3-1-202ENST00000523261 PSCAO43653 123 aa9.24□□□□□ -0.93
NKX3-1-202ENST00000523261 ZNF182P17025 639 aaPredicted RBP9.24□□□□□ -0.93
NKX3-1-202ENST00000523261 S100GP29377 79 aa9.24□□□□□ -0.93
NKX3-1-202ENST00000523261 LYPD5Q6UWN5 251 aa9.24□□□□□ -0.93
NKX3-1-202ENST00000523261 PACRGLQ8N7B6 248 aa9.24□□□□□ -0.93
NKX3-1-202ENST00000523261 TMEM170AQ8WVE7 144 aa9.24□□□□□ -0.93
NKX3-1-202ENST00000523261 ICOSQ9Y6W8 199 aa9.24□□□□□ -0.93
NKX3-1-202ENST00000523261 TRDV1A0A1B0GX56 115 aa9.23□□□□□ -0.93
NKX3-1-202ENST00000523261 H7BYZ3 331 aa9.23□□□□□ -0.93
NKX3-1-202ENST00000523261 PRB4P10163 310 aaPredicted RBP9.23□□□□□ -0.93
NKX3-1-202ENST00000523261 EVI2AP22794 236 aa9.23□□□□□ -0.93
NKX3-1-202ENST00000523261 AKR1C2P52895 323 aa9.23□□□□□ -0.93
NKX3-1-202ENST00000523261 GAMTQ14353 236 aa9.23□□□□□ -0.93
NKX3-1-202ENST00000523261 IDNKQ5T6J7 187 aa9.23□□□□□ -0.93
NKX3-1-202ENST00000523261 IGFL4Q6B9Z1 124 aa9.23□□□□□ -0.93
NKX3-1-202ENST00000523261 C22orf42Q6IC83 251 aa9.23□□□□□ -0.93
NKX3-1-202ENST00000523261 ETFRF1Q6IPR1 90 aa9.23□□□□□ -0.93
NKX3-1-202ENST00000523261 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.23□□□□□ -0.93
NKX3-1-202ENST00000523261 Q6ZTI0 123 aa9.23□□□□□ -0.93
NKX3-1-202ENST00000523261 WFDC10BQ8IUB3 73 aa9.23□□□□□ -0.93
NKX3-1-202ENST00000523261 RRNAD1Q96FB5 475 aaKnown RBP9.23□□□□□ -0.93
NKX3-1-202ENST00000523261 IFT46Q9NQC8 304 aa9.23□□□□□ -0.93
NKX3-1-202ENST00000523261 SCN3BQ9NY72 215 aa9.23□□□□□ -0.93
NKX3-1-202ENST00000523261 ANAPC10Q9UM13 185 aa9.23□□□□□ -0.93
NKX3-1-202ENST00000523261 A0A0A6YYH2 397 aa9.22□□□□□ -0.93
NKX3-1-202ENST00000523261 TRAV8-2A0A0B4J237 113 aa9.22□□□□□ -0.93
NKX3-1-202ENST00000523261 A6NJ64 397 aa9.22□□□□□ -0.93
NKX3-1-202ENST00000523261 HNRNPA3P51991 378 aaKnown RBP9.22□□□□□ -0.93
NKX3-1-202ENST00000523261 LYZP61626 148 aa9.22□□□□□ -0.93
NKX3-1-202ENST00000523261 KIR3DS1Q14943 382 aa9.22□□□□□ -0.93
NKX3-1-202ENST00000523261 LPCAT3Q6P1A2 487 aa9.22□□□□□ -0.93
NKX3-1-202ENST00000523261 RNF182Q8N6D2 247 aa9.22□□□□□ -0.93
NKX3-1-202ENST00000523261 OR5H6Q8NGV6 325 aa9.22□□□□□ -0.93
NKX3-1-202ENST00000523261 OR5H2Q8NGV7 314 aa9.22□□□□□ -0.93
NKX3-1-202ENST00000523261 RSG1Q9BU20 258 aa9.22□□□□□ -0.93
NKX3-1-202ENST00000523261 SLC25A32Q9H2D1 315 aa9.22□□□□□ -0.93
NKX3-1-202ENST00000523261 HEYLQ9NQ87 328 aaPredicted RBP9.22□□□□□ -0.93
NKX3-1-202ENST00000523261 C8orf4Q9NR00 106 aa9.22□□□□□ -0.93
NKX3-1-202ENST00000523261 A0A0G2JRQ6 117 aa9.21□□□□□ -0.94
NKX3-1-202ENST00000523261 SNURFLB1AK76 121 aa9.21□□□□□ -0.94
NKX3-1-202ENST00000523261 GALR1P47211 349 aa9.21□□□□□ -0.94
NKX3-1-202ENST00000523261 TAS2R46P59540 309 aa9.21□□□□□ -0.94
NKX3-1-202ENST00000523261 SPCS3P61009 180 aa9.21□□□□□ -0.94
NKX3-1-202ENST00000523261 RHOBP62745 196 aa9.21□□□□□ -0.94
NKX3-1-202ENST00000523261 ZNF90Q03938 601 aa9.21□□□□□ -0.94
NKX3-1-202ENST00000523261 PPP1R14BQ96C90 147 aa9.21□□□□□ -0.94
NKX3-1-202ENST00000523261 DUSP21Q9H596 190 aa9.21□□□□□ -0.94
NKX3-1-202ENST00000523261 IGKV1D-37A0A075B6S9 117 aa9.2□□□□□ -0.94
NKX3-1-202ENST00000523261 PAX4O43316 350 aa9.2□□□□□ -0.94
NKX3-1-202ENST00000523261 ZNF324O75467 553 aaPredicted RBP9.2□□□□□ -0.94
NKX3-1-202ENST00000523261 CRYGDP07320 174 aa9.2□□□□□ -0.94
NKX3-1-202ENST00000523261 NAT1P18440 290 aa9.2□□□□□ -0.94
NKX3-1-202ENST00000523261 HIST1H1AQ02539 215 aaPredicted RBP9.2□□□□□ -0.94
NKX3-1-202ENST00000523261 AARDQ4LEZ3 155 aa9.2□□□□□ -0.94
NKX3-1-202ENST00000523261 CCDC28AQ8IWP9 274 aa9.2□□□□□ -0.94
NKX3-1-202ENST00000523261 LRTM2Q8N967 370 aa9.2□□□□□ -0.94
NKX3-1-202ENST00000523261 DIABLOQ9NR28 239 aa9.2□□□□□ -0.94
NKX3-1-202ENST00000523261 NDUFB11Q9NX14 153 aa9.2□□□□□ -0.94
NKX3-1-202ENST00000523261 RGS10O43665 173 aa9.19□□□□□ -0.94
NKX3-1-202ENST00000523261 OR5AC1P0C628 307 aa9.19□□□□□ -0.94
NKX3-1-202ENST00000523261 CDKN1BP46527 198 aa9.19□□□□□ -0.94
NKX3-1-202ENST00000523261 DAZ2Q13117 558 aaKnown RBP9.19□□□□□ -0.94
NKX3-1-202ENST00000523261 KLF9Q13886 244 aaPredicted RBP9.19□□□□□ -0.94
NKX3-1-202ENST00000523261 C10orf126Q8N4M7 172 aa9.19□□□□□ -0.94
NKX3-1-202ENST00000523261 ZNF738Q8NE65 137 aa9.19□□□□□ -0.94
NKX3-1-202ENST00000523261 OR8A1Q8NGG7 326 aa9.19□□□□□ -0.94
NKX3-1-202ENST00000523261 OR52E5Q8NH55 327 aa9.19□□□□□ -0.94
NKX3-1-202ENST00000523261 TP53RKQ96S44 253 aa9.19□□□□□ -0.94
NKX3-1-202ENST00000523261 C20orf144Q9BQM9 153 aa9.19□□□□□ -0.94
NKX3-1-202ENST00000523261 CHAC1Q9BUX1 264 aa9.19□□□□□ -0.94
NKX3-1-202ENST00000523261 PPP1R14DQ9NXH3 145 aa9.19□□□□□ -0.94
NKX3-1-202ENST00000523261 TRGV2A0A075B6R0 118 aa9.18□□□□□ -0.94
NKX3-1-202ENST00000523261 ZFP92A6NM28 416 aa9.18□□□□□ -0.94
NKX3-1-202ENST00000523261 GAS8-AS1O95177 125 aa9.18□□□□□ -0.94
NKX3-1-202ENST00000523261 HRH1P35367 487 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms