RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 TRAV26-2A0A0B4J265 109 aa2.39□□□□□ -2.03
CTNNA1-233ENST00000522052 C2orf74A8MZ97 194 aa2.39□□□□□ -2.03
CTNNA1-233ENST00000522052 C3orf84H3BNL1 204 aa2.39□□□□□ -2.03
CTNNA1-233ENST00000522052 NEFHP12036 1026 aa2.39□□□□□ -2.03
CTNNA1-233ENST00000522052 IAH1Q2TAA2 248 aaPredicted RBP2.39□□□□□ -2.03
CTNNA1-233ENST00000522052 AGTRAPQ6RW13 159 aa2.39□□□□□ -2.03
CTNNA1-233ENST00000522052 OR8B12Q8NGG6 310 aa2.39□□□□□ -2.03
CTNNA1-233ENST00000522052 OR4X1Q8NH49 305 aa2.39□□□□□ -2.03
CTNNA1-233ENST00000522052 MRPL30Q8TCC3 161 aaKnown RBP2.39□□□□□ -2.03
CTNNA1-233ENST00000522052 TSPAN32Q96QS1 320 aa2.39□□□□□ -2.03
CTNNA1-233ENST00000522052 RBM7Q9Y580 266 aaKnown RBP2.39□□□□□ -2.03
CTNNA1-233ENST00000522052 SDK1Q7Z5N4 2213 aa2.39□□□□□ -2.03
CTNNA1-233ENST00000522052 PCNX2A6NKB5 2137 aa2.38□□□□□ -2.03
CTNNA1-233ENST00000522052 A0A0J9YW62 118 aa2.38□□□□□ -2.03
CTNNA1-233ENST00000522052 FAM236DA0A1B0GTK5 79 aa2.38□□□□□ -2.03
CTNNA1-233ENST00000522052 LEPROTO15243 131 aa2.38□□□□□ -2.03
CTNNA1-233ENST00000522052 FAM236CP0DP71 79 aa2.38□□□□□ -2.03
CTNNA1-233ENST00000522052 ALDH3A1P30838 453 aa2.38□□□□□ -2.03
CTNNA1-233ENST00000522052 S100A5P33763 92 aa2.38□□□□□ -2.03
CTNNA1-233ENST00000522052 RPS20P60866 119 aaKnown RBP2.38□□□□□ -2.03
CTNNA1-233ENST00000522052 CCL20P78556 96 aa2.38□□□□□ -2.03
CTNNA1-233ENST00000522052 Q6ZS52 159 aa2.38□□□□□ -2.03
CTNNA1-233ENST00000522052 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
CTNNA1-233ENST00000522052 BTF3L4Q96K17 158 aa2.38□□□□□ -2.03
CTNNA1-233ENST00000522052 SIGMAR1Q99720 223 aa2.38□□□□□ -2.03
CTNNA1-233ENST00000522052 Q9BRP9 147 aa2.38□□□□□ -2.03
CTNNA1-233ENST00000522052 IDI2-AS1Q9NZ38 188 aa2.38□□□□□ -2.03
CTNNA1-233ENST00000522052 PTPRSQ13332 1948 aa2.38□□□□□ -2.03
CTNNA1-233ENST00000522052 ANKRD36CQ5JPF3 1778 aa2.38□□□□□ -2.03
CTNNA1-233ENST00000522052 MED13Q9UHV7 2174 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 CRYZL1O95825 349 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 SERPINA7P05543 415 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 CST2P09228 141 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 TFPTP0C1Z6 253 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 CCR2P41597 374 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 SS18Q15532 418 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 PABPC1L2AQ5JQF8 200 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 PP632Q6XCG6 107 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 SLC35E3Q7Z769 313 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 TET1Q8NFU7 2136 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 OR5J2Q8NH18 312 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 ACOT12Q8WYK0 555 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 MRPS24Q96EL2 167 aaKnown RBP2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 IMMP2LQ96T52 175 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 NIPSNAP1Q9BPW8 284 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 TMEM147Q9BVK8 224 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 FBXL12Q9NXK8 326 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 IL36BQ9NZH7 164 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 HHLA3Q9XRX5 114 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 TMEM56-RWDD3S4R434 201 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 MEGF8Q7Z7M0 2845 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 SIPA1L1O43166 1804 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 RYR1P21817 5038 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 ATG2BQ96BY7 2078 aa2.37□□□□□ -2.03
CTNNA1-233ENST00000522052 ECM29Q5VYK3 1845 aa2.36□□□□□ -2.03
CTNNA1-233ENST00000522052 hADV38S2A0JD32 116 aa2.36□□□□□ -2.03
CTNNA1-233ENST00000522052 PDE6DO43924 150 aa2.36□□□□□ -2.03
CTNNA1-233ENST00000522052 OR7C1O76099 320 aaPredicted RBP2.36□□□□□ -2.03
CTNNA1-233ENST00000522052 C1QAP02745 245 aa2.36□□□□□ -2.03
CTNNA1-233ENST00000522052 PRM2P04554 102 aa2.36□□□□□ -2.03
CTNNA1-233ENST00000522052 PSMB8P28062 276 aa2.36□□□□□ -2.03
CTNNA1-233ENST00000522052 TPI1P60174 286 aa2.36□□□□□ -2.03
CTNNA1-233ENST00000522052 MEF2BQ02080 365 aaPredicted RBP2.36□□□□□ -2.03
CTNNA1-233ENST00000522052 ZNF181Q2M3W8 571 aa2.36□□□□□ -2.03
CTNNA1-233ENST00000522052 LIN52Q52LA3 116 aa2.36□□□□□ -2.03
CTNNA1-233ENST00000522052 S100A7AQ86SG5 101 aa2.36□□□□□ -2.03
CTNNA1-233ENST00000522052 DNAJC30Q96LL9 226 aa2.36□□□□□ -2.03
CTNNA1-233ENST00000522052 OR8D2Q9GZM6 311 aa2.36□□□□□ -2.03
CTNNA1-233ENST00000522052 NMNAT1Q9HAN9 279 aaPredicted RBP2.36□□□□□ -2.03
CTNNA1-233ENST00000522052 C14orf105Q9NVL8 296 aa2.36□□□□□ -2.03
CTNNA1-233ENST00000522052 NDUFB11Q9NX14 153 aa2.36□□□□□ -2.03
CTNNA1-233ENST00000522052 MYO16Q9Y6X6 1858 aa2.36□□□□□ -2.03
CTNNA1-233ENST00000522052 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.36□□□□□ -2.032e-6■■■□□ 15.3
CTNNA1-233ENST00000522052 AKAP9Q99996 3911 aa2.36□□□□□ -2.03
CTNNA1-233ENST00000522052 ATG2AQ2TAZ0 1938 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 ZNF878C9JN71 531 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 FNDC10F2Z333 226 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 KLRC4O43908 158 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 CREBL2O60519 120 aaPredicted RBP2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 LGALS1P09382 135 aaKnown RBP2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 HIST1H2BOP23527 126 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 HLA-DMBP28068 263 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 HIST1H2BBP33778 126 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 HIST1H2BDP58876 126 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 DEFA1P59665 94 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 HIST1H4AP62805 103 aaKnown RBP2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 HIST1H2BCP62807 126 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 HBA1P69905 142 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 ZNF90Q03938 601 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 HIST2H2BEQ16778 126 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 TMEM42Q69YG0 159 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 LYZL1Q6UWQ5 148 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 OOSP2Q86WS3 158 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 ZNF676Q8N7Q3 588 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 OR51A2Q8NGJ7 313 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 OR51T1Q8NGJ9 327 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 OR10X1Q8NGY0 326 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 CT55Q8WUE5 264 aa2.35□□□□□ -2.03
CTNNA1-233ENST00000522052 HIST1H2BHQ93079 126 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms