RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 C12orf45Q8N5I9 185 aaPredicted RBP8.4□□□□□ -1.06
VCAN-212ENST00000515397 OR1B1Q8NGR6 318 aa8.4□□□□□ -1.06
VCAN-212ENST00000515397 OR11H2Q8NH07 326 aa8.4□□□□□ -1.06
VCAN-212ENST00000515397 SLC25A22Q9H936 323 aa8.4□□□□□ -1.06
VCAN-212ENST00000515397 NRN1Q9NPD7 142 aa8.4□□□□□ -1.06
VCAN-212ENST00000515397 CXorf65A6NEN9 183 aa8.39□□□□□ -1.07
VCAN-212ENST00000515397 IL5P05113 134 aa8.39□□□□□ -1.07
VCAN-212ENST00000515397 FABP1P07148 127 aa8.39□□□□□ -1.07
VCAN-212ENST00000515397 C4BPBP20851 252 aa8.39□□□□□ -1.07
VCAN-212ENST00000515397 FXYD7P58549 80 aa8.39□□□□□ -1.07
VCAN-212ENST00000515397 ZNF846Q147U1 533 aa8.39□□□□□ -1.07
VCAN-212ENST00000515397 GDF5OSQ5U4N7 250 aa8.39□□□□□ -1.07
VCAN-212ENST00000515397 TMEM14EPQ6UXP3 125 aa8.39□□□□□ -1.07
VCAN-212ENST00000515397 CYP2G1PQ6ZSU1 146 aa8.39□□□□□ -1.07
VCAN-212ENST00000515397 TMEM144Q7Z5S9 345 aa8.39□□□□□ -1.07
VCAN-212ENST00000515397 TRPT1Q86TN4 253 aaKnown RBP8.39□□□□□ -1.07
VCAN-212ENST00000515397 S100ZQ8WXG8 99 aa8.39□□□□□ -1.07
VCAN-212ENST00000515397 RSG1Q9BU20 258 aa8.39□□□□□ -1.07
VCAN-212ENST00000515397 FAM24AA6NFZ4 105 aa8.38□□□□□ -1.07
VCAN-212ENST00000515397 ZNF98A6NK75 572 aa8.38□□□□□ -1.07
VCAN-212ENST00000515397 UPK1BO75841 260 aa8.38□□□□□ -1.07
VCAN-212ENST00000515397 SIX6O95475 246 aa8.38□□□□□ -1.07
VCAN-212ENST00000515397 BCAP31P51572 246 aa8.38□□□□□ -1.07
VCAN-212ENST00000515397 SNRPD3P62318 126 aaKnown RBP8.38□□□□□ -1.07
VCAN-212ENST00000515397 ASAH1Q13510 395 aa8.38□□□□□ -1.07
VCAN-212ENST00000515397 IGFL4Q6B9Z1 124 aa8.38□□□□□ -1.07
VCAN-212ENST00000515397 MZT2BQ6NZ67 158 aa8.38□□□□□ -1.07
VCAN-212ENST00000515397 BPIFCQ8NFQ6 507 aa8.38□□□□□ -1.07
VCAN-212ENST00000515397 OR10P1Q8NGE3 313 aa8.38□□□□□ -1.07
VCAN-212ENST00000515397 C17orf77Q96MU5 243 aa8.38□□□□□ -1.07
VCAN-212ENST00000515397 SLC25A32Q9H2D1 315 aa8.38□□□□□ -1.07
VCAN-212ENST00000515397 SACSQ9NZJ4 4579 aa8.37□□□□□ -1.07
VCAN-212ENST00000515397 LCE6AA0A183 80 aa8.37□□□□□ -1.07
VCAN-212ENST00000515397 F6UB75 175 aa8.37□□□□□ -1.07
VCAN-212ENST00000515397 K7EPK0 472 aa8.37□□□□□ -1.07
VCAN-212ENST00000515397 L7N2F9 121 aa8.37□□□□□ -1.07
VCAN-212ENST00000515397 CST7O76096 145 aa8.37□□□□□ -1.07
VCAN-212ENST00000515397 SNRPCP09234 159 aaKnown RBP8.37□□□□□ -1.07
VCAN-212ENST00000515397 NANOS2P60321 138 aaKnown RBP8.37□□□□□ -1.07
VCAN-212ENST00000515397 S100A10P60903 97 aa8.37□□□□□ -1.07
VCAN-212ENST00000515397 VAMP2P63027 116 aa8.37□□□□□ -1.07
VCAN-212ENST00000515397 SLC38A11Q08AI6 406 aa8.37□□□□□ -1.07
VCAN-212ENST00000515397 PLECQ15149 4684 aaKnown RBP8.37□□□□□ -1.07
VCAN-212ENST00000515397 C20orf173Q96LM9 149 aa8.37□□□□□ -1.07
VCAN-212ENST00000515397 C2orf50Q96LR7 162 aa8.37□□□□□ -1.07
VCAN-212ENST00000515397 UHRF2Q96PU4 802 aa8.37□□□□□ -1.07
VCAN-212ENST00000515397 TMEM147Q9BVK8 224 aa8.37□□□□□ -1.07
VCAN-212ENST00000515397 SCRT1Q9BWW7 348 aa8.37□□□□□ -1.07
VCAN-212ENST00000515397 PTTG2Q9NZH5 202 aa8.37□□□□□ -1.07
VCAN-212ENST00000515397 XCL2Q9UBD3 114 aa8.37□□□□□ -1.07
VCAN-212ENST00000515397 PFDN2Q9UHV9 154 aa8.37□□□□□ -1.07
VCAN-212ENST00000515397 H3BMM0 161 aa8.36□□□□□ -1.07
VCAN-212ENST00000515397 SOCS3O14543 225 aa8.36□□□□□ -1.07
VCAN-212ENST00000515397 TSC22D2O75157 780 aa8.36□□□□□ -1.07
VCAN-212ENST00000515397 OR5G3P0C626 314 aa8.36□□□□□ -1.07
VCAN-212ENST00000515397 CAV2P51636 162 aa8.36□□□□□ -1.07
VCAN-212ENST00000515397 TAS2R30P59541 319 aa8.36□□□□□ -1.07
VCAN-212ENST00000515397 DLK1P80370 383 aa8.36□□□□□ -1.07
VCAN-212ENST00000515397 FGL1Q08830 312 aa8.36□□□□□ -1.07
VCAN-212ENST00000515397 RAB32Q13637 225 aa8.36□□□□□ -1.07
VCAN-212ENST00000515397 C1orf194Q5T5A4 169 aa8.36□□□□□ -1.07
VCAN-212ENST00000515397 PATE2Q6UY27 113 aa8.36□□□□□ -1.07
VCAN-212ENST00000515397 LINC00299Q6ZSB3 139 aa8.36□□□□□ -1.07
VCAN-212ENST00000515397 NRARPQ7Z6K4 114 aa8.36□□□□□ -1.07
VCAN-212ENST00000515397 TMEM217Q8N7C4 229 aa8.36□□□□□ -1.07
VCAN-212ENST00000515397 ENKURQ8TC29 256 aa8.36□□□□□ -1.07
VCAN-212ENST00000515397 GATAD1Q8WUU5 269 aa8.36□□□□□ -1.07
VCAN-212ENST00000515397 NPVFQ9HCQ7 196 aa8.36□□□□□ -1.07
VCAN-212ENST00000515397 HYPMO75409 117 aa8.35□□□□□ -1.07
VCAN-212ENST00000515397 LINC00869P0C866 280 aa8.35□□□□□ -1.07
VCAN-212ENST00000515397 ZNF705DP0CH99 300 aaPredicted RBP8.35□□□□□ -1.07
VCAN-212ENST00000515397 ZNF705BP0CI00 300 aaPredicted RBP8.35□□□□□ -1.07
VCAN-212ENST00000515397 RBMY1A1P0DJD3 496 aaKnown RBP8.35□□□□□ -1.07
VCAN-212ENST00000515397 RBMY1CP0DJD4 496 aa8.35□□□□□ -1.07
VCAN-212ENST00000515397 ID1P41134 155 aa8.35□□□□□ -1.07
VCAN-212ENST00000515397 RBMY1FQ15415 496 aaKnown RBP8.35□□□□□ -1.07
VCAN-212ENST00000515397 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.35□□□□□ -1.07
VCAN-212ENST00000515397 OR4B1Q8NGF8 309 aa8.35□□□□□ -1.07
VCAN-212ENST00000515397 C16orf92Q96LL3 132 aa8.35□□□□□ -1.07
VCAN-212ENST00000515397 SLC25A39Q9BZJ4 359 aaPredicted RBP8.35□□□□□ -1.07
VCAN-212ENST00000515397 ARL6Q9H0F7 186 aa8.35□□□□□ -1.07
VCAN-212ENST00000515397 C11orf1Q9H5F2 150 aa8.35□□□□□ -1.07
VCAN-212ENST00000515397 MGAT4CQ9UBM8 478 aa8.35□□□□□ -1.07
VCAN-212ENST00000515397 FBXL17Q9UF56 701 aa8.35□□□□□ -1.07
VCAN-212ENST00000515397 RYR2Q92736 4967 aa8.35□□□□□ -1.07
VCAN-212ENST00000515397 IGHV4-28A0A0C4DH34 117 aa8.34□□□□□ -1.07
VCAN-212ENST00000515397 INMT-MINDY4F8WBC2 141 aa8.34□□□□□ -1.07
VCAN-212ENST00000515397 H3BRN7 92 aa8.34□□□□□ -1.07
VCAN-212ENST00000515397 GOSR2O14653 212 aa8.34□□□□□ -1.07
VCAN-212ENST00000515397 DEDDO75618 318 aa8.34□□□□□ -1.07
VCAN-212ENST00000515397 CFDP00746 253 aaPredicted RBP8.34□□□□□ -1.07
VCAN-212ENST00000515397 SPP1P10451 314 aa8.34□□□□□ -1.07
VCAN-212ENST00000515397 HLA-DMBP28068 263 aa8.34□□□□□ -1.07
VCAN-212ENST00000515397 NUP62P37198 522 aaPredicted RBP8.34□□□□□ -1.07
VCAN-212ENST00000515397 GALR1P47211 349 aa8.34□□□□□ -1.07
VCAN-212ENST00000515397 IL15RAQ13261 267 aa8.34□□□□□ -1.07
VCAN-212ENST00000515397 TEPPQ6URK8 271 aa8.34□□□□□ -1.07
VCAN-212ENST00000515397 RNF182Q8N6D2 247 aa8.34□□□□□ -1.07
VCAN-212ENST00000515397 CSNK1G2-AS1Q8NCQ2 148 aa8.34□□□□□ -1.07
VCAN-212ENST00000515397 MGST2Q99735 147 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms