RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 ARPC1AQ92747 370 aa10.78□□□□□ -0.68
TCOF1-213ENST00000514442 MGST2Q99735 147 aa10.78□□□□□ -0.68
TCOF1-213ENST00000514442 MBD3L4A6NDZ8 208 aaPredicted RBP10.78□□□□□ -0.68
TCOF1-213ENST00000514442 MBD3L3A6NE82 208 aaPredicted RBP10.78□□□□□ -0.68
TCOF1-213ENST00000514442 MBD3L5A6NJ08 208 aaPredicted RBP10.78□□□□□ -0.68
TCOF1-213ENST00000514442 IGKV3-15P01624 115 aa10.78□□□□□ -0.68
TCOF1-213ENST00000514442 NPPCP23582 126 aa10.78□□□□□ -0.68
TCOF1-213ENST00000514442 DUTP33316 252 aaKnown RBP10.78□□□□□ -0.68
TCOF1-213ENST00000514442 DEFB125Q8N687 156 aa10.78□□□□□ -0.68
TCOF1-213ENST00000514442 MBD3L2Q8NHZ7 208 aaPredicted RBP10.78□□□□□ -0.68
TCOF1-213ENST00000514442 MRAP2Q96G30 205 aa10.78□□□□□ -0.68
TCOF1-213ENST00000514442 GEMIN7Q9H840 131 aaKnown RBP10.78□□□□□ -0.68
TCOF1-213ENST00000514442 UPK2O00526 184 aa10.77□□□□□ -0.68
TCOF1-213ENST00000514442 ZNF672Q499Z4 452 aaPredicted RBP10.77□□□□□ -0.68
TCOF1-213ENST00000514442 PLA2G2CQ5R387 149 aa10.77□□□□□ -0.68
TCOF1-213ENST00000514442 ASCL4Q6XD76 172 aa10.77□□□□□ -0.68
TCOF1-213ENST00000514442 GPR82Q96P67 336 aa10.77□□□□□ -0.68
TCOF1-213ENST00000514442 RCHY1Q96PM5 261 aa10.77□□□□□ -0.68
TCOF1-213ENST00000514442 TSSC4Q9Y5U2 329 aaPredicted RBP10.77□□□□□ -0.68
TCOF1-213ENST00000514442 KIAA1671Q9BY89 1806 aa10.77□□□□□ -0.69
TCOF1-213ENST00000514442 CACNG7P62955 275 aa10.77□□□□□ -0.69
TCOF1-213ENST00000514442 PPP1R27Q86WC6 154 aa10.77□□□□□ -0.69
TCOF1-213ENST00000514442 IGKV3-20P01619 116 aa10.77□□□□□ -0.69
TCOF1-213ENST00000514442 TMEM42Q69YG0 159 aa10.77□□□□□ -0.69
TCOF1-213ENST00000514442 C18orf15Q96N68 181 aa10.77□□□□□ -0.69
TCOF1-213ENST00000514442 PSG3Q16557 428 aa10.76□□□□□ -0.69
TCOF1-213ENST00000514442 FAM169BQ8N8A8 192 aa10.76□□□□□ -0.69
TCOF1-213ENST00000514442 TMEM160Q9NX00 188 aa10.76□□□□□ -0.69
TCOF1-213ENST00000514442 V9GYV3 84 aa10.76□□□□□ -0.69
TCOF1-213ENST00000514442 C15orf61A6NNL5 157 aa10.76□□□□□ -0.69
TCOF1-213ENST00000514442 TMEM144Q7Z5S9 345 aa10.76□□□□□ -0.69
TCOF1-213ENST00000514442 LYPD6Q86Y78 171 aa10.76□□□□□ -0.69
TCOF1-213ENST00000514442 DOCK7Q96N67 2140 aa10.76□□□□□ -0.69
TCOF1-213ENST00000514442 LY6HO94772 140 aa10.76□□□□□ -0.69
TCOF1-213ENST00000514442 IGHV3-11P01762 117 aa10.76□□□□□ -0.69
TCOF1-213ENST00000514442 HS3ST6Q96QI5 342 aa10.76□□□□□ -0.69
TCOF1-213ENST00000514442 FOXI3A8MTJ6 420 aaPredicted RBP10.76□□□□□ -0.69
TCOF1-213ENST00000514442 LMO1P25800 156 aa10.76□□□□□ -0.69
TCOF1-213ENST00000514442 FOXL2NBQ6ZUU3 175 aa10.76□□□□□ -0.69
TCOF1-213ENST00000514442 ZFHX2Q9C0A1 2572 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-213ENST00000514442 PRSS47A8MTI9 375 aa10.75□□□□□ -0.69
TCOF1-213ENST00000514442 KIAA2026Q5HYC2 2103 aa10.75□□□□□ -0.69
TCOF1-213ENST00000514442 BCL6BQ8N143 479 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-213ENST00000514442 NUP210Q8TEM1 1887 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-213ENST00000514442 ZFAND6Q6FIF0 208 aa10.75□□□□□ -0.69
TCOF1-213ENST00000514442 CLEC19AQ6UXS0 136 aa10.75□□□□□ -0.69
TCOF1-213ENST00000514442 C21orf62Q9NYP8 219 aa10.75□□□□□ -0.69
TCOF1-213ENST00000514442 FAM90A9PA6NNJ1 464 aa10.75□□□□□ -0.69
TCOF1-213ENST00000514442 NBR2O15453 112 aa10.75□□□□□ -0.69
TCOF1-213ENST00000514442 HBDP02042 147 aa10.75□□□□□ -0.69
TCOF1-213ENST00000514442 TIMM23O14925 209 aa10.75□□□□□ -0.69
TCOF1-213ENST00000514442 NBEAP1P0C6P0 100 aa10.75□□□□□ -0.69
TCOF1-213ENST00000514442 CD300EQ496F6 205 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-213ENST00000514442 DENND4CQ5VZ89 1909 aa10.75□□□□□ -0.69
TCOF1-213ENST00000514442 PSMB11A5LHX3 300 aa10.74□□□□□ -0.69
TCOF1-213ENST00000514442 TMEM262E9PQX1 116 aa10.74□□□□□ -0.69
TCOF1-213ENST00000514442 ETV2O00321 342 aaPredicted RBP10.74□□□□□ -0.69
TCOF1-213ENST00000514442 SPINK8P0C7L1 97 aa10.74□□□□□ -0.69
TCOF1-213ENST00000514442 LINC00205P59089 165 aa10.74□□□□□ -0.69
TCOF1-213ENST00000514442 GNG5P63218 68 aa10.74□□□□□ -0.69
TCOF1-213ENST00000514442 GAGE12HA6NDE8 117 aa10.74□□□□□ -0.69
TCOF1-213ENST00000514442 OR11H12B2RN74 326 aa10.74□□□□□ -0.69
TCOF1-213ENST00000514442 SAP30O75446 220 aa10.74□□□□□ -0.69
TCOF1-213ENST00000514442 C10orf55Q5SWW7 151 aa10.74□□□□□ -0.69
TCOF1-213ENST00000514442 OR11H1Q8NG94 326 aa10.74□□□□□ -0.69
TCOF1-213ENST00000514442 OR11H2Q8NH07 326 aa10.74□□□□□ -0.69
TCOF1-213ENST00000514442 CYYR1Q96J86 154 aa10.74□□□□□ -0.69
TCOF1-213ENST00000514442 PRB4P10163 310 aaPredicted RBP10.74□□□□□ -0.69
TCOF1-213ENST00000514442 KLRD1Q13241 179 aa10.74□□□□□ -0.69
TCOF1-213ENST00000514442 TMEM200BQ69YZ2 307 aa10.74□□□□□ -0.69
TCOF1-213ENST00000514442 ORMDL3Q8N138 153 aa10.74□□□□□ -0.69
TCOF1-213ENST00000514442 ZNF502Q8TBZ5 544 aa10.74□□□□□ -0.69
TCOF1-213ENST00000514442 FOXC2Q99958 501 aa10.74□□□□□ -0.69
TCOF1-213ENST00000514442 MCRIP2Q9BUT9 160 aaKnown RBP10.74□□□□□ -0.69
TCOF1-213ENST00000514442 TRBV6-6A0A0A6YYG2 114 aa10.73□□□□□ -0.69
TCOF1-213ENST00000514442 TMEM178BH3BS89 294 aa10.73□□□□□ -0.69
TCOF1-213ENST00000514442 ANOS1P23352 680 aa10.73□□□□□ -0.69
TCOF1-213ENST00000514442 Q6AWC8 147 aa10.73□□□□□ -0.69
TCOF1-213ENST00000514442 RPUSD1Q9UJJ7 312 aaKnown RBP10.73□□□□□ -0.69
TCOF1-213ENST00000514442 COX8AP10176 69 aa10.73□□□□□ -0.69
TCOF1-213ENST00000514442 DLX6P56179 175 aa10.73□□□□□ -0.69
TCOF1-213ENST00000514442 Q6P435 159 aa10.73□□□□□ -0.69
TCOF1-213ENST00000514442 KIF26AQ9ULI4 1882 aaPredicted RBP10.73□□□□□ -0.69
TCOF1-213ENST00000514442 PRR31Q5SQ13 230 aa10.73□□□□□ -0.69
TCOF1-213ENST00000514442 OR52E5Q8NH55 327 aa10.73□□□□□ -0.69
TCOF1-213ENST00000514442 EPDR1Q9UM22 224 aa10.73□□□□□ -0.69
TCOF1-213ENST00000514442 MSRB2Q9Y3D2 182 aa10.73□□□□□ -0.69
TCOF1-213ENST00000514442 SLAQ13239 276 aa10.72□□□□□ -0.69
TCOF1-213ENST00000514442 C20orf204Q6ZNR8 217 aa10.72□□□□□ -0.69
TCOF1-213ENST00000514442 LHFPL4Q7Z7J7 247 aa10.72□□□□□ -0.69
TCOF1-213ENST00000514442 COQ2Q96H96 371 aa10.72□□□□□ -0.69
TCOF1-213ENST00000514442 ZNF256Q9Y2P7 627 aaPredicted RBP10.72□□□□□ -0.69
TCOF1-213ENST00000514442 C15orf62A8K5M9 175 aa10.72□□□□□ -0.69
TCOF1-213ENST00000514442 ZNF585BQ52M93 769 aa10.72□□□□□ -0.69
TCOF1-213ENST00000514442 TEX45Q8NA69 505 aa10.72□□□□□ -0.69
TCOF1-213ENST00000514442 DUX5Q96PT3 197 aa10.72□□□□□ -0.69
TCOF1-213ENST00000514442 LINC00527Q9UJ94 153 aa10.72□□□□□ -0.69
TCOF1-213ENST00000514442 PCNX1Q96RV3 2341 aa10.72□□□□□ -0.69
TCOF1-213ENST00000514442 IGKV1D-17A0A075B6S4 117 aa10.72□□□□□ -0.69
TCOF1-213ENST00000514442 A0A1W2PPM0 123 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms