RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, human

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3TC1-223	ENST00000513495	SLC39A9	Q9NUM3	307 aa		11.96	□□□□□ -0.49
SH3TC1-223	ENST00000513495	HIGD1A	Q9Y241	93 aa		11.96	□□□□□ -0.49
SH3TC1-223	ENST00000513495	ANK2	Q01484	3957 aa		11.95	□□□□□ -0.5
SH3TC1-223	ENST00000513495	PLP1	P60201	277 aa		11.95	□□□□□ -0.5
SH3TC1-223	ENST00000513495	MIC13	Q5XKP0	118 aa		11.95	□□□□□ -0.5
SH3TC1-223	ENST00000513495	LCN12	Q6JVE5	192 aa		11.95	□□□□□ -0.5
SH3TC1-223	ENST00000513495	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.95	□□□□□ -0.5
SH3TC1-223	ENST00000513495	HSD17B11	Q8NBQ5	300 aa		11.95	□□□□□ -0.5
SH3TC1-223	ENST00000513495	DOK5	Q9P104	306 aa		11.95	□□□□□ -0.5
SH3TC1-223	ENST00000513495	TIMM9	Q9Y5J7	89 aa		11.95	□□□□□ -0.5
SH3TC1-223	ENST00000513495	IGHV3-49	A0A0A0MS15	119 aa		11.94	□□□□□ -0.5
SH3TC1-223	ENST00000513495	HELT	A6NFD8	242 aa		11.94	□□□□□ -0.5
SH3TC1-223	ENST00000513495	CHEK1	O14757	476 aa		11.94	□□□□□ -0.5
SH3TC1-223	ENST00000513495	BCL2L11	O43521	198 aa		11.94	□□□□□ -0.5
SH3TC1-223	ENST00000513495	CXCL2	P19875	107 aa		11.94	□□□□□ -0.5
SH3TC1-223	ENST00000513495	PRR20E	P86478	221 aa		11.94	□□□□□ -0.5
SH3TC1-223	ENST00000513495	PRR20C	P86479	221 aa		11.94	□□□□□ -0.5
SH3TC1-223	ENST00000513495	PRR20D	P86480	221 aa		11.94	□□□□□ -0.5
SH3TC1-223	ENST00000513495	PRR20B	P86481	221 aa		11.94	□□□□□ -0.5
SH3TC1-223	ENST00000513495	PRR20A	P86496	221 aa		11.94	□□□□□ -0.5
SH3TC1-223	ENST00000513495	C10orf113	Q5VZT2	155 aa		11.94	□□□□□ -0.5
SH3TC1-223	ENST00000513495	RPL7L1	Q6DKI1	246 aa	Known RBP	11.94	□□□□□ -0.5
SH3TC1-223	ENST00000513495	TMEM182	Q6ZP80	229 aa	Predicted RBP	11.94	□□□□□ -0.5
SH3TC1-223	ENST00000513495	TMUB2	Q71RG4	321 aa		11.94	□□□□□ -0.5
SH3TC1-223	ENST00000513495	ZNF414	Q96IQ9	312 aa		11.94	□□□□□ -0.5
SH3TC1-223	ENST00000513495	RSG1	Q9BU20	258 aa		11.94	□□□□□ -0.5
SH3TC1-223	ENST00000513495	DNAJC4	Q9NNZ3	241 aa		11.94	□□□□□ -0.5
SH3TC1-223	ENST00000513495	DNHD1	Q96M86	4753 aa		11.94	□□□□□ -0.5
SH3TC1-223	ENST00000513495	IGHV3OR16-13	A0A075B7E8	117 aa		11.93	□□□□□ -0.5
SH3TC1-223	ENST00000513495	IGHV3-74	A0A0B4J1X5	117 aa		11.93	□□□□□ -0.5
SH3TC1-223	ENST00000513495	TRAV25	A0A0B4J276	109 aa		11.93	□□□□□ -0.5
SH3TC1-223	ENST00000513495	IGLV1-51	P01701	117 aa		11.93	□□□□□ -0.5
SH3TC1-223	ENST00000513495	RPL11	P62913	178 aa	Known RBP	11.93	□□□□□ -0.5
SH3TC1-223	ENST00000513495	CD300C	Q08708	224 aa		11.93	□□□□□ -0.5
SH3TC1-223	ENST00000513495	DEFB114	Q30KQ6	69 aa		11.93	□□□□□ -0.5
SH3TC1-223	ENST00000513495	FFAR4	Q5NUL3	377 aa		11.93	□□□□□ -0.5
SH3TC1-223	ENST00000513495	C1orf194	Q5T5A4	169 aa		11.93	□□□□□ -0.5
SH3TC1-223	ENST00000513495	ZNF471	Q9BX82	626 aa	Predicted RBP	11.93	□□□□□ -0.5
SH3TC1-223	ENST00000513495	ARV1	Q9H2C2	271 aa		11.93	□□□□□ -0.5
SH3TC1-223	ENST00000513495	VSIR	Q9H7M9	311 aa		11.93	□□□□□ -0.5
SH3TC1-223	ENST00000513495	MLX	Q9UH92	298 aa		11.93	□□□□□ -0.5
SH3TC1-223	ENST00000513495	IGHV3-66	A0A0C4DH42	116 aa		11.92	□□□□□ -0.5
SH3TC1-223	ENST00000513495	WIPF1	O43516	503 aa		11.92	□□□□□ -0.5
SH3TC1-223	ENST00000513495	PAFAH1B2	P68402	229 aa		11.92	□□□□□ -0.5
SH3TC1-223	ENST00000513495	OXLD1	Q5BKU9	147 aa		11.92	□□□□□ -0.5
SH3TC1-223	ENST00000513495	OR8I2	Q8N0Y5	310 aa		11.92	□□□□□ -0.5
SH3TC1-223	ENST00000513495	GATAD1	Q8WUU5	269 aa		11.92	□□□□□ -0.5
SH3TC1-223	ENST00000513495	ST8SIA2	Q92186	375 aa		11.92	□□□□□ -0.5
SH3TC1-223	ENST00000513495	GPR82	Q96P67	336 aa		11.92	□□□□□ -0.5
SH3TC1-223	ENST00000513495	RNF2	Q99496	336 aa		11.92	□□□□□ -0.5
SH3TC1-223	ENST00000513495	PSMG3	Q9BT73	122 aa	Predicted RBP	11.92	□□□□□ -0.5
SH3TC1-223	ENST00000513495	VWF	P04275	2813 aa		11.92	□□□□□ -0.5
SH3TC1-223	ENST00000513495	NOTCH3	Q9UM47	2321 aa		11.92	□□□□□ -0.5
SH3TC1-223	ENST00000513495	BUB3	O43684	328 aa		11.91	□□□□□ -0.5
SH3TC1-223	ENST00000513495	MB	P02144	154 aa		11.91	□□□□□ -0.5
SH3TC1-223	ENST00000513495	APOH	P02749	345 aa	Predicted RBP	11.91	□□□□□ -0.5
SH3TC1-223	ENST00000513495	EDN2	P20800	178 aa		11.91	□□□□□ -0.5
SH3TC1-223	ENST00000513495	ATP6V0C	P27449	155 aa		11.91	□□□□□ -0.5
SH3TC1-223	ENST00000513495	SERF2	P84101	59 aa		11.91	□□□□□ -0.5
SH3TC1-223	ENST00000513495	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.91	□□□□□ -0.5
SH3TC1-223	ENST00000513495	CD300E	Q496F6	205 aa	Predicted RBP	11.91	□□□□□ -0.5
SH3TC1-223	ENST00000513495	ADAMTSL5	Q6ZMM2	481 aa		11.91	□□□□□ -0.5
SH3TC1-223	ENST00000513495	TCF24	Q7RTU0	167 aa		11.91	□□□□□ -0.5
SH3TC1-223	ENST00000513495	LINC00305	Q7Z4B0	112 aa		11.91	□□□□□ -0.5
SH3TC1-223	ENST00000513495	SHANK2-AS3	Q9BTD1	123 aa		11.91	□□□□□ -0.5
SH3TC1-223	ENST00000513495	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	11.91	□□□□□ -0.5
SH3TC1-223	ENST00000513495	SLC25A22	Q9H936	323 aa		11.91	□□□□□ -0.5
SH3TC1-223	ENST00000513495		U3KQE9	123 aa		11.91	□□□□□ -0.5
SH3TC1-223	ENST00000513495		H3BRN7	92 aa		11.9	□□□□□ -0.5
SH3TC1-223	ENST00000513495	TPT1	P13693	172 aa	Known RBP	11.9	□□□□□ -0.5
SH3TC1-223	ENST00000513495	GALR1	P47211	349 aa		11.9	□□□□□ -0.5
SH3TC1-223	ENST00000513495	GUCA2B	Q16661	112 aa		11.9	□□□□□ -0.5
SH3TC1-223	ENST00000513495	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.9	□□□□□ -0.5
SH3TC1-223	ENST00000513495	SAMD5	Q5TGI4	173 aa		11.9	□□□□□ -0.5
SH3TC1-223	ENST00000513495	C16orf54	Q6UWD8	224 aa		11.9	□□□□□ -0.5
SH3TC1-223	ENST00000513495	OR2G3	Q8NGZ4	309 aa		11.9	□□□□□ -0.5
SH3TC1-223	ENST00000513495	UHRF2	Q96PU4	802 aa		11.9	□□□□□ -0.5
SH3TC1-223	ENST00000513495	ZNF98	A6NK75	572 aa		11.89	□□□□□ -0.51
SH3TC1-223	ENST00000513495		G3V4G9	280 aa		11.89	□□□□□ -0.51
SH3TC1-223	ENST00000513495	RPL7	P18124	248 aa	Known RBP	11.89	□□□□□ -0.51
SH3TC1-223	ENST00000513495	EIF5AL1	Q6IS14	154 aa	Known RBP	11.89	□□□□□ -0.51
SH3TC1-223	ENST00000513495	SIGLEC15	Q6ZMC9	328 aa		11.89	□□□□□ -0.51
SH3TC1-223	ENST00000513495	TMEM61	Q8N0U2	210 aa		11.89	□□□□□ -0.51
SH3TC1-223	ENST00000513495	SPAG8	Q99932	426 aa	Predicted RBP	11.89	□□□□□ -0.51
SH3TC1-223	ENST00000513495	MRPL32	Q9BYC8	188 aa	Known RBP	11.89	□□□□□ -0.51
SH3TC1-223	ENST00000513495	CYTL1	Q9NRR1	136 aa		11.89	□□□□□ -0.51
SH3TC1-223	ENST00000513495	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.89	□□□□□ -0.51
SH3TC1-223	ENST00000513495		A0A1W2PPV4	95 aa		11.88	□□□□□ -0.51
SH3TC1-223	ENST00000513495	OR4C46	A6NHA9	309 aa		11.88	□□□□□ -0.51
SH3TC1-223	ENST00000513495	DNASE2	O00115	360 aa	Predicted RBP	11.88	□□□□□ -0.51
SH3TC1-223	ENST00000513495	TSPAN4	O14817	238 aa		11.88	□□□□□ -0.51
SH3TC1-223	ENST00000513495	M6PR	P20645	277 aa		11.88	□□□□□ -0.51
SH3TC1-223	ENST00000513495	RHOB	P62745	196 aa		11.88	□□□□□ -0.51
SH3TC1-223	ENST00000513495	FAM78B	Q5VT40	261 aa		11.88	□□□□□ -0.51
SH3TC1-223	ENST00000513495	PATE2	Q6UY27	113 aa		11.88	□□□□□ -0.51
SH3TC1-223	ENST00000513495	GTSCR1	Q86UQ5	136 aa		11.88	□□□□□ -0.51
SH3TC1-223	ENST00000513495	C9orf62	Q8N4C0	152 aa		11.88	□□□□□ -0.51
SH3TC1-223	ENST00000513495	STXBP6	Q8NFX7	210 aa		11.88	□□□□□ -0.51
SH3TC1-223	ENST00000513495	GLMP	Q8WWB7	406 aa		11.88	□□□□□ -0.51
SH3TC1-223	ENST00000513495	TMEM37	Q8WXS4	190 aa		11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms