RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 OR8B3Q8NGG8 313 aa7.41□□□□□ -1.22
LIMCH1-215ENST00000512632 Q9H3A6 140 aa7.41□□□□□ -1.22
LIMCH1-215ENST00000512632 C20orf202A1L168 122 aa7.41□□□□□ -1.22
LIMCH1-215ENST00000512632 RASL11AQ6T310 242 aa7.41□□□□□ -1.22
LIMCH1-215ENST00000512632 PMCHL2Q9BQD1 86 aa7.41□□□□□ -1.22
LIMCH1-215ENST00000512632 hDV102S1A0JD36 115 aa7.4□□□□□ -1.22
LIMCH1-215ENST00000512632 OR2J3O76001 311 aa7.4□□□□□ -1.22
LIMCH1-215ENST00000512632 LOXP28300 417 aaPredicted RBP7.4□□□□□ -1.22
LIMCH1-215ENST00000512632 CA7P43166 264 aa7.4□□□□□ -1.22
LIMCH1-215ENST00000512632 Q6ZS92 163 aa7.4□□□□□ -1.22
LIMCH1-215ENST00000512632 C22orf15Q8WYQ4 148 aa7.4□□□□□ -1.22
LIMCH1-215ENST00000512632 A0A1B0GXF2 115 aa7.4□□□□□ -1.22
LIMCH1-215ENST00000512632 CEACAM8P31997 349 aaPredicted RBP7.4□□□□□ -1.22
LIMCH1-215ENST00000512632 KLF5Q13887 457 aaPredicted RBP7.4□□□□□ -1.22
LIMCH1-215ENST00000512632 PRNTQ86SH4 94 aa7.4□□□□□ -1.22
LIMCH1-215ENST00000512632 STXBP6Q8NFX7 210 aa7.4□□□□□ -1.22
LIMCH1-215ENST00000512632 TMEM70Q9BUB7 260 aa7.4□□□□□ -1.22
LIMCH1-215ENST00000512632 OR4C46A6NHA9 309 aa7.4□□□□□ -1.22
LIMCH1-215ENST00000512632 LYNX1G3V0Z9 82 aa7.4□□□□□ -1.22
LIMCH1-215ENST00000512632 TCRAP04437 139 aa7.4□□□□□ -1.22
LIMCH1-215ENST00000512632 LYNX1P0DP58 116 aa7.4□□□□□ -1.22
LIMCH1-215ENST00000512632 COL8A1P27658 744 aa7.4□□□□□ -1.22
LIMCH1-215ENST00000512632 GOLT1AQ6ZVE7 132 aa7.4□□□□□ -1.22
LIMCH1-215ENST00000512632 MLST8Q9BVC4 326 aa7.4□□□□□ -1.22
LIMCH1-215ENST00000512632 A0A0G2JNJ9 132 aa7.4□□□□□ -1.23
LIMCH1-215ENST00000512632 CCL25O15444 150 aa7.4□□□□□ -1.23
LIMCH1-215ENST00000512632 CEACAM4O75871 244 aa7.4□□□□□ -1.23
LIMCH1-215ENST00000512632 MRGPRG-AS1Q2M3A8 158 aa7.4□□□□□ -1.23
LIMCH1-215ENST00000512632 C5orf17Q8NAS9 161 aa7.4□□□□□ -1.23
LIMCH1-215ENST00000512632 RBM14Q96PK6 669 aaKnown RBP7.4□□□□□ -1.23
LIMCH1-215ENST00000512632 DYNLRB1Q9NP97 96 aa7.4□□□□□ -1.23
LIMCH1-215ENST00000512632 Q9UFV3 132 aa7.4□□□□□ -1.23
LIMCH1-215ENST00000512632 INS-IGF2F8WCM5 200 aa7.39□□□□□ -1.23
LIMCH1-215ENST00000512632 CHEK1O14757 476 aa7.39□□□□□ -1.23
LIMCH1-215ENST00000512632 OR4A5Q8NH83 315 aa7.39□□□□□ -1.23
LIMCH1-215ENST00000512632 FBXL15Q9H469 300 aa7.39□□□□□ -1.23
LIMCH1-215ENST00000512632 AKAP13Q12802 2813 aa7.39□□□□□ -1.23
LIMCH1-215ENST00000512632 RBP4P02753 201 aa7.39□□□□□ -1.23
LIMCH1-215ENST00000512632 PSG1P11464 419 aa7.39□□□□□ -1.23
LIMCH1-215ENST00000512632 COX7A1P24310 79 aa7.39□□□□□ -1.23
LIMCH1-215ENST00000512632 MC5RP33032 325 aa7.39□□□□□ -1.23
LIMCH1-215ENST00000512632 C3orf36Q3SXR2 165 aa7.39□□□□□ -1.23
LIMCH1-215ENST00000512632 IGFBPL1Q8WX77 278 aa7.39□□□□□ -1.23
LIMCH1-215ENST00000512632 TPPP3Q9BW30 176 aa7.39□□□□□ -1.23
LIMCH1-215ENST00000512632 KLF12Q9Y4X4 402 aa7.39□□□□□ -1.23
LIMCH1-215ENST00000512632 LEPROTL1O95214 131 aa7.39□□□□□ -1.23
LIMCH1-215ENST00000512632 ETFRF1Q6IPR1 90 aa7.39□□□□□ -1.23
LIMCH1-215ENST00000512632 PRSS33Q8NF86 280 aa7.39□□□□□ -1.23
LIMCH1-215ENST00000512632 IGHV1-8P0DP01 117 aa7.39□□□□□ -1.23
LIMCH1-215ENST00000512632 NUP37Q8NFH4 326 aa7.39□□□□□ -1.23
LIMCH1-215ENST00000512632 FAM57AQ8TBR7 257 aa7.39□□□□□ -1.23
LIMCH1-215ENST00000512632 INSIG2Q9Y5U4 225 aa7.39□□□□□ -1.23
LIMCH1-215ENST00000512632 S4R3C0 116 aa7.39□□□□□ -1.23
LIMCH1-215ENST00000512632 IGHV2-26A0A0B4J1V2 119 aa7.38□□□□□ -1.23
LIMCH1-215ENST00000512632 KLK10O43240 276 aa7.38□□□□□ -1.23
LIMCH1-215ENST00000512632 TOMM40O96008 361 aa7.38□□□□□ -1.23
LIMCH1-215ENST00000512632 THBDP07204 575 aa7.38□□□□□ -1.23
LIMCH1-215ENST00000512632 CRYGCP07315 174 aa7.38□□□□□ -1.23
LIMCH1-215ENST00000512632 GP9P14770 177 aa7.38□□□□□ -1.23
LIMCH1-215ENST00000512632 LGALS7P47929 136 aa7.38□□□□□ -1.23
LIMCH1-215ENST00000512632 C17orf77Q96MU5 243 aa7.38□□□□□ -1.23
LIMCH1-215ENST00000512632 PRSS22Q9GZN4 317 aa7.38□□□□□ -1.23
LIMCH1-215ENST00000512632 IGHV1-24A0A0C4DH33 117 aa7.38□□□□□ -1.23
LIMCH1-215ENST00000512632 ATP5L2Q7Z4Y8 100 aa7.38□□□□□ -1.23
LIMCH1-215ENST00000512632 RNASE6Q93091 150 aaKnown RBP7.38□□□□□ -1.23
LIMCH1-215ENST00000512632 TRGV9Q99603 122 aa7.38□□□□□ -1.23
LIMCH1-215ENST00000512632 MRPS16Q9Y3D3 137 aaKnown RBP7.38□□□□□ -1.23
LIMCH1-215ENST00000512632 TLN1Q9Y490 2541 aaKnown RBP7.38□□□□□ -1.23
LIMCH1-215ENST00000512632 CRYABP02511 175 aaKnown RBP7.38□□□□□ -1.23
LIMCH1-215ENST00000512632 SFTPCP11686 197 aa7.38□□□□□ -1.23
LIMCH1-215ENST00000512632 RBPMS2Q6ZRY4 209 aaKnown RBP7.38□□□□□ -1.23
LIMCH1-215ENST00000512632 OR4F17Q8NGA8 305 aa7.38□□□□□ -1.23
LIMCH1-215ENST00000512632 A0A1W2PRD5 423 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 A0A1W2PRF3 423 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 A0A1W2PRM7 423 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 SYS1-DBNDD2H3BUS1 97 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 PLGLAQ15195 96 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 TMEM155Q4W5P6 130 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 MPV17L2Q567V2 206 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 C8orf46Q8TAG6 207 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 TMEM133Q9H2Q1 129 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 HIGD1AQ9Y241 93 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 SIGLEC9Q9Y336 463 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 C19orf71A6NCJ1 209 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 FAM120AOSQ5T036 256 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 LINC00311Q8N616 119 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 TMEM116Q8NCL8 245 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 ZNF738Q8NE65 137 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 SRSF12Q8WXF0 261 aaKnown RBP7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 PRRG2O14669 202 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 LTAP01374 205 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 IGFL3Q6UXB1 125 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 ARHGAP32A7KAX9 2087 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 HTR1DP28221 377 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 PPP1R27Q86WC6 154 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 FMC1Q96HJ9 113 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 COX11Q9Y6N1 276 aa7.37□□□□□ -1.23
LIMCH1-215ENST00000512632 NUDT3O95989 172 aa7.36□□□□□ -1.23
LIMCH1-215ENST00000512632 DLX6P56179 175 aa7.36□□□□□ -1.23
LIMCH1-215ENST00000512632 RNASE8Q8TDE3 154 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms