RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 TMEM182Q6ZP80 229 aaPredicted RBP14.84□□□□□ -0.03
SMAD1-211ENST00000512019 S100A7AQ86SG5 101 aa14.84□□□□□ -0.03
SMAD1-211ENST00000512019 DYNLRB2Q8TF09 96 aa14.84□□□□□ -0.03
SMAD1-211ENST00000512019 ARL6Q9H0F7 186 aa14.84□□□□□ -0.03
SMAD1-211ENST00000512019 PXMP4Q9Y6I8 212 aa14.84□□□□□ -0.03
SMAD1-211ENST00000512019 RYR3Q15413 4870 aa14.84□□□□□ -0.03
SMAD1-211ENST00000512019 IGHV7-4-1A0A0J9YVY3 117 aa14.83□□□□□ -0.04
SMAD1-211ENST00000512019 BCL2L11O43521 198 aa14.83□□□□□ -0.04
SMAD1-211ENST00000512019 JTBO76095 146 aa14.83□□□□□ -0.04
SMAD1-211ENST00000512019 C8orf88P0DMB2 117 aa14.83□□□□□ -0.04
SMAD1-211ENST00000512019 ORM2P19652 201 aa14.83□□□□□ -0.04
SMAD1-211ENST00000512019 CRYBB3P26998 211 aa14.83□□□□□ -0.04
SMAD1-211ENST00000512019 PLP1P60201 277 aa14.83□□□□□ -0.04
SMAD1-211ENST00000512019 B2MP61769 119 aa14.83□□□□□ -0.04
SMAD1-211ENST00000512019 PRR20EP86478 221 aa14.83□□□□□ -0.04
SMAD1-211ENST00000512019 PRR20CP86479 221 aa14.83□□□□□ -0.04
SMAD1-211ENST00000512019 PRR20DP86480 221 aa14.83□□□□□ -0.04
SMAD1-211ENST00000512019 PRR20BP86481 221 aa14.83□□□□□ -0.04
SMAD1-211ENST00000512019 PRR20AP86496 221 aa14.83□□□□□ -0.04
SMAD1-211ENST00000512019 DEFB121Q5J5C9 76 aa14.83□□□□□ -0.04
SMAD1-211ENST00000512019 MIC13Q5XKP0 118 aa14.83□□□□□ -0.04
SMAD1-211ENST00000512019 Q6ZRG5 221 aa14.83□□□□□ -0.04
SMAD1-211ENST00000512019 OR1B1Q8NGR6 318 aa14.83□□□□□ -0.04
SMAD1-211ENST00000512019 TMEM231Q9H6L2 316 aa14.83□□□□□ -0.04
SMAD1-211ENST00000512019 SLC39A9Q9NUM3 307 aa14.83□□□□□ -0.04
SMAD1-211ENST00000512019 A0A1W2PS18 150 aa14.82□□□□□ -0.04
SMAD1-211ENST00000512019 HYPMO75409 117 aa14.82□□□□□ -0.04
SMAD1-211ENST00000512019 RPL7L1Q6DKI1 246 aaKnown RBP14.82□□□□□ -0.04
SMAD1-211ENST00000512019 TMUB2Q71RG4 321 aa14.82□□□□□ -0.04
SMAD1-211ENST00000512019 RSG1Q9BU20 258 aa14.82□□□□□ -0.04
SMAD1-211ENST00000512019 TECRQ9NZ01 308 aaKnown RBP14.82□□□□□ -0.04
SMAD1-211ENST00000512019 DOK5Q9P104 306 aa14.82□□□□□ -0.04
SMAD1-211ENST00000512019 SMPXQ9UHP9 88 aa14.82□□□□□ -0.04
SMAD1-211ENST00000512019 TIMM9Q9Y5J7 89 aa14.82□□□□□ -0.04
SMAD1-211ENST00000512019 NBEAL2Q6ZNJ1 2754 aa14.82□□□□□ -0.04
SMAD1-211ENST00000512019 COX7A2P2O60397 106 aa14.81□□□□□ -0.04
SMAD1-211ENST00000512019 EDN2P20800 178 aa14.81□□□□□ -0.04
SMAD1-211ENST00000512019 HSD17B11Q8NBQ5 300 aa14.81□□□□□ -0.04
SMAD1-211ENST00000512019 PPP1R14BQ96C90 147 aa14.81□□□□□ -0.04
SMAD1-211ENST00000512019 GRAMD2BQ96HH9 432 aa14.81□□□□□ -0.04
SMAD1-211ENST00000512019 RHPN1-AS1Q9BWJ2 59 aa14.81□□□□□ -0.04
SMAD1-211ENST00000512019 HIGD1AQ9Y241 93 aa14.81□□□□□ -0.04
SMAD1-211ENST00000512019 ELOA3CA0A087WX78 387 aaPredicted RBP14.8□□□□□ -0.04
SMAD1-211ENST00000512019 IGHV3-49A0A0A0MS15 119 aa14.8□□□□□ -0.04
SMAD1-211ENST00000512019 OR5G3P0C626 314 aa14.8□□□□□ -0.04
SMAD1-211ENST00000512019 EGFEM1PQ0D2K5 195 aa14.8□□□□□ -0.04
SMAD1-211ENST00000512019 LGALSLQ3ZCW2 172 aaPredicted RBP14.8□□□□□ -0.04
SMAD1-211ENST00000512019 ADAMTSL5Q6ZMM2 481 aa14.8□□□□□ -0.04
SMAD1-211ENST00000512019 OR1L4Q8NGR5 311 aa14.8□□□□□ -0.04
SMAD1-211ENST00000512019 GNPNAT1Q96EK6 184 aaPredicted RBP14.8□□□□□ -0.04
SMAD1-211ENST00000512019 PFDN5Q99471 154 aa14.8□□□□□ -0.04
SMAD1-211ENST00000512019 VSIRQ9H7M9 311 aa14.8□□□□□ -0.04
SMAD1-211ENST00000512019 CYTL1Q9NRR1 136 aa14.8□□□□□ -0.04
SMAD1-211ENST00000512019 CHEK1O14757 476 aa14.79□□□□□ -0.04
SMAD1-211ENST00000512019 C4BPBP20851 252 aa14.79□□□□□ -0.04
SMAD1-211ENST00000512019 EIF5AP63241 154 aaKnown RBP14.79□□□□□ -0.04
SMAD1-211ENST00000512019 C9orf62Q8N4C0 152 aa14.79□□□□□ -0.04
SMAD1-211ENST00000512019 ST8SIA2Q92186 375 aa14.79□□□□□ -0.04
SMAD1-211ENST00000512019 PSMG3Q9BT73 122 aaPredicted RBP14.79□□□□□ -0.04
SMAD1-211ENST00000512019 ZNF471Q9BX82 626 aaPredicted RBP14.79□□□□□ -0.04
SMAD1-211ENST00000512019 ARV1Q9H2C2 271 aa14.79□□□□□ -0.04
SMAD1-211ENST00000512019 MLXQ9UH92 298 aa14.79□□□□□ -0.04
SMAD1-211ENST00000512019 RNF24Q9Y225 148 aa14.79□□□□□ -0.04
SMAD1-211ENST00000512019 U3KQE9 123 aa14.79□□□□□ -0.04
SMAD1-211ENST00000512019 IGHV3OR16-13A0A075B7E8 117 aa14.78□□□□□ -0.04
SMAD1-211ENST00000512019 IGHV3-74A0A0B4J1X5 117 aa14.78□□□□□ -0.04
SMAD1-211ENST00000512019 IGLV1-51P01701 117 aa14.78□□□□□ -0.04
SMAD1-211ENST00000512019 APOHP02749 345 aaPredicted RBP14.78□□□□□ -0.04
SMAD1-211ENST00000512019 CD5P06127 495 aa14.78□□□□□ -0.04
SMAD1-211ENST00000512019 ATP6V0CP27449 155 aa14.78□□□□□ -0.04
SMAD1-211ENST00000512019 FFAR4Q5NUL3 377 aa14.78□□□□□ -0.04
SMAD1-211ENST00000512019 C10orf113Q5VZT2 155 aa14.78□□□□□ -0.04
SMAD1-211ENST00000512019 OR2K2Q8NGT1 345 aa14.78□□□□□ -0.04
SMAD1-211ENST00000512019 IGHV3-66A0A0C4DH42 116 aa14.77□□□□□ -0.05
SMAD1-211ENST00000512019 DEFB114Q30KQ6 69 aa14.77□□□□□ -0.05
SMAD1-211ENST00000512019 GATAD1Q8WUU5 269 aa14.77□□□□□ -0.05
SMAD1-211ENST00000512019 SHANK2-AS3Q9BTD1 123 aa14.77□□□□□ -0.05
SMAD1-211ENST00000512019 SLC25A39Q9BZJ4 359 aaPredicted RBP14.77□□□□□ -0.05
SMAD1-211ENST00000512019 DNAJC4Q9NNZ3 241 aa14.77□□□□□ -0.05
SMAD1-211ENST00000512019 H3BRN7 92 aa14.76□□□□□ -0.05
SMAD1-211ENST00000512019 BUB3O43684 328 aa14.76□□□□□ -0.05
SMAD1-211ENST00000512019 C1orf194Q5T5A4 169 aa14.76□□□□□ -0.05
SMAD1-211ENST00000512019 LAMTOR1Q6IAA8 161 aa14.76□□□□□ -0.05
SMAD1-211ENST00000512019 LCN12Q6JVE5 192 aa14.76□□□□□ -0.05
SMAD1-211ENST00000512019 PATE2Q6UY27 113 aa14.76□□□□□ -0.05
SMAD1-211ENST00000512019 OR2G3Q8NGZ4 309 aa14.76□□□□□ -0.05
SMAD1-211ENST00000512019 RNF2Q99496 336 aa14.76□□□□□ -0.05
SMAD1-211ENST00000512019 ZMAT5Q9UDW3 170 aaKnown RBP14.76□□□□□ -0.05
SMAD1-211ENST00000512019 HELTA6NFD8 242 aa14.75□□□□□ -0.05
SMAD1-211ENST00000512019 TPT1P13693 172 aaKnown RBP14.75□□□□□ -0.05
SMAD1-211ENST00000512019 NKX2-5P52952 324 aaPredicted RBP14.75□□□□□ -0.05
SMAD1-211ENST00000512019 SERF2P84101 59 aa14.75□□□□□ -0.05
SMAD1-211ENST00000512019 ACOT6Q3I5F7 207 aaPredicted RBP14.75□□□□□ -0.05
SMAD1-211ENST00000512019 CD300EQ496F6 205 aaPredicted RBP14.75□□□□□ -0.05
SMAD1-211ENST00000512019 C16orf54Q6UWD8 224 aa14.75□□□□□ -0.05
SMAD1-211ENST00000512019 RBPMS2Q6ZRY4 209 aaKnown RBP14.75□□□□□ -0.05
SMAD1-211ENST00000512019 LINC00305Q7Z4B0 112 aa14.75□□□□□ -0.05
SMAD1-211ENST00000512019 TMEM37Q8WXS4 190 aa14.75□□□□□ -0.05
SMAD1-211ENST00000512019 UHRF2Q96PU4 802 aa14.75□□□□□ -0.05
SMAD1-211ENST00000512019 SH3BGRL3Q9H299 93 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms